test(perf): measure Windows MCP startup on current artifact

.agents/skills/reverse-engineer-anything/SKILL.md

@@ -59,7 +59,7 @@ availability have different remedies; avoid repeating setup for all of them.
    absent, inspect the client's MCP launch error rather than repeating setup.
 
 REA setup never installs or upgrades Node.js, npm, Homebrew, Java, Ghidra, IDA,
-JADX, Kuna, Binwalk, or Unblob. Use existing prerequisites; do not install unrelated
+JADX, Binwalk, or Unblob. Use existing prerequisites; do not install unrelated
 software to repair
 MCP registration. For an unsupported client, use manual stdio registration
 with a version-pinned `rea-agents` package or continue through the CLI.
@@ -79,7 +79,7 @@ is within the authorized scope, use `npx -y rea-agents@latest` in its place.
 Configuration repair starts with a read-only setup plan; show paths, backups and
 skill replacement before applying authorized changes. Preserve existing approval
 and target-execution boundaries. REA setup never installs or upgrades unrelated
-software, including Node.js, npm, Homebrew, Java, Ghidra, IDA, JADX, Kuna, Binwalk or Unblob.
+software, including Node.js, npm, Homebrew, Java, Ghidra, IDA, JADX, Binwalk or Unblob.
 
 ## Route the target first
 
@@ -215,20 +215,6 @@ after opening; IDA does not supply `binary_overview`. Consult session availabili
 when composing broader workflows. Modern direct callers and unsupported dossier
 facets remain unknown; live IDA results are not replayed from snapshots.
 
-With `REA_KUNA_COMMAND` configured, `provider_id: "kuna"` answers procedure
-lists, lookups, pseudocode, assembly and `analyze_function` from Kuna's cached
-whole-program export. Callers/callees use a separate body-free graph shared by
-the session; `xrefs` returns exact-address incoming sites and filters forwarding
-aliases. These queries and inventory lookups do not trigger a C export. Indirect
-targets remain unknown and can make relationship coverage partial. Reference
-caches expire on close; a fresh CLI process repeats the native reference walk.
-Typed references, CFG, raw-memory tools and annotations remain unsupported. A cold first
-answer can come from a single-function run (its limitations say so); assembly
-waits for the export. For pseudocode and assembly, `raw_result.source` names the
-cached `.c`/`.asm` file and byte span, which you may search directly instead of
-calling per function. See the
-[Kuna provider guide](https://github.com/morluto/rea/blob/main/docs/kuna-provider.md).
-
 If the user says only "my app" without a name, path, or target already selected
 for this task, ask which app before searching for artifacts. Paths in unrelated
 saved reports and nearby test fixtures do not select the user's target. Resolve

.agents/skills/reverse-engineer-anything/references/android-applications.md

@@ -24,9 +24,7 @@ matching bundled native controls and uses an owned Job Object with bidirectional
 stdio. A full JDK, including `jdk.compiler`, is required on every host; Windows
 `JAVA_HOME` selects `bin\java.exe`. Consult the Android guide for actual host
 verification coverage. Calls use one worker and provider deadlines; optional
-`REA_JADX_HEAP_MIB` selects the JVM heap and `REA_JADX_OPERATION_TIMEOUT_MS`
-the per-operation deadline (default 120000 ms; the MCP client's tool timeout
-must also allow it). The APK is never launched,
+`REA_JADX_HEAP_MIB` selects the JVM heap. The APK is never launched,
 and no emulator is required.
 
 Manifest entries and decompiled text are static observations, not execution or

.agents/skills/reverse-engineer-anything/references/javascript-applications.md

@@ -94,36 +94,6 @@ recorded observations, identity, hashes, exports and source ranges; it does not
 include every child syntax observation, related edge or original source file.
 An absent item fact is not evidence of absence from the whole application.
 
-For canonical identities and retained source-range counts, use a typed reference
-page instead of reading every full item:
-
-```json
-{
-  "source": {
-    "kind": "retained-evidence",
-    "evidence_id": "ev_ACTUAL_PARENT_ID"
-  },
-  "view": {
-    "kind": "javascript",
-    "collection": "modules",
-    "projection": "references",
-    "where": { "path": "main.js", "kind": "javascript-module" },
-    "offset": 0,
-    "limit": 16
-  }
-}
-```
-
-Filters match exact retained strings; omit a filter to include all values, use
-`path: null` for unavailable paths, and `path: ""` for a recorded empty path.
-Rows preserve canonical `identity` and distinct observation support states in
-`basis`. `retained_source_range_count` counts retained source-range observations,
-not runtime imports or unique reference sites. Use a row's `node_id` with the item
-view above for exact locations and full supporting observations. Follow
-`coverage.next_offset`; page exhaustion describes matching retained rows only.
-Check `source_coverage` for source selection, partial/unknown graph coverage and
-unknown counts before drawing a negative conclusion.
-
 ## Trace only the remaining question
 
 Use `trace_application_feature` on the parent application Evidence for one
@@ -195,8 +165,7 @@ accept complete inline Evidence or
 `{"kind":"retained-evidence","evidence_id":"ev_<64 lowercase hex characters>"}`
 for their application input (`application`, or `left`/`right`). `inspect_analysis_view`
 uses the same retained-reference form in `source`, or portable inline Evidence,
-to project a summary, module page, or one module with its recorded observations.
-This notation is
+to project a summary, module page, or one module with its recorded observations. This notation is
 a template: replace it with the actual returned ID. Versions before 4.1.0 accept only full
 inline Evidence. Use the exact ID
 returned by the producer on the same MCP connection. Resolution does not run
@@ -204,15 +173,3 @@ analysis or select a provider; findings remain inline. Native observation
 arrays still take full Evidence. `close_binary` clears retained references;
 export a bundle before closing, or supply portable inline Evidence in another
 connection. A missing reference includes its ID and recovery guidance.
-
-For exact file/native metadata or processing gaps, use
-`view: {kind: "javascript-facts", where: {paths: ["package.json"]}, property_keys: ["name", "operation", "analysis_status"], limit: 32}`.
-Rows retain canonical node/observation identity and original Evidence. Paths
-match Evidence artifact-path/source-range locations; missing properties remain
-omitted and source coverage stays separate from page exhaustion. Batch paths and
-select only needed property keys; complete Evidence remains accessible by export.
-If names are unknown, opt into `include_available_property_keys: true`; it lists
-the original keys per returned observation without unselected values. Keep each
-row's node/observation identity paired when composing facts.
-These rows select application-graph observations; semantic relationships and
-semantic unknown records remain in the complete parent Evidence and trace tools.

.agents/skills/reverse-engineer-anything/references/native-and-artifacts.md

@@ -246,15 +246,13 @@ context. PSP/stack/device state remains unmodeled. See [DOS guide](https://githu
 
 For other headerless images (embedded firmware without ELF/Mach-O/PE/MZ
 headers), open with `format: "raw-binary"`, `architecture` (`x86`, `x86_64`,
-`arm`, `arm64`, `6502`, or `m68k`), and `entry_point` (`0x` hex). File offset 0 is mapped at
+`arm`, `arm64`, or `6502`), and `entry_point` (`0x` hex). File offset 0 is mapped at
 that address. Hopper and IDA refuse this interpretation; Ghidra uses
-`BinaryLoader` with a generic language: big-endian for `m68k`, little-endian
-otherwise. Big-endian ARM, Thumb-only, and Cortex-M variants are unsupported.
-`6502` selects NMOS 6502; the entry and complete file mapping must fit within
-`0x0000..0xffff`. 65C02, 65816, cartridge containers, bank switching, and mapper
-semantics are unsupported. `m68k` requires an even entry and decodes the 68040
-superset of the 68000 family; Amiga/Atari containers and vector-table entry
-discovery are unsupported. Windows Ghidra P0 admits raw images only for `6502`. See [raw binary guide](https://github.com/morluto/rea/blob/main/docs/raw-binary.md).
+`BinaryLoader` with a little-endian generic language. Big-endian, Thumb-only,
+and Cortex-M variants are unsupported. `6502` selects NMOS 6502; the entry and
+complete file mapping must fit within `0x0000..0xffff`. 65C02, 65816, cartridge
+containers, bank switching, and mapper semantics are unsupported. Windows
+Ghidra P0 admits raw images only for `6502`. See [raw binary guide](https://github.com/morluto/rea/blob/main/docs/raw-binary.md).
 
 ### Function annotations in Ghidra
 

.github/workflows/ghidra-bridge-sources.yml

@@ -1,48 +0,0 @@
-name: Ghidra bridge source compilation
-
-on:
-  workflow_dispatch:
-  workflow_call:
-
-permissions:
-  contents: read
-
-env:
-  HUSKY: "0"
-
-jobs:
-  ghidra-bridge-sources:
-    name: Compile packaged Ghidra bridge sources
-    runs-on: ubuntu-24.04
-    timeout-minutes: 15
-    env:
-      GHIDRA_RELEASE_URL: https://github.com/NationalSecurityAgency/ghidra/releases/download/Ghidra_12.1.4_build/ghidra_12.1.4_PUBLIC_20260921.zip
-      GHIDRA_RELEASE_SHA256: ddac49f903da9d5bac833e5cc79395098b9c33cfd3279be5f31bd00387d2d4db
-    steps:
-      - uses: actions/checkout@11d5960a326750d5838078e36cf38b85af677262 # v4.4.0
-      - uses: actions/setup-node@49933ea5288caeca8642d1e84afbd3f7d6820020 # v4.4.0
-        with:
-          node-version-file: .nvmrc
-      - name: Validate the SDK pin against the provider's verified release
-        run: node scripts/verify-ghidra-bridge-sources.mjs --check-sdk-pin >> "$GITHUB_ENV"
-      # Only the jars and application.properties are extracted: the check
-      # compiles against them and never launches Ghidra or imports a target.
-      - name: Acquire checksum-verified Ghidra jars in isolated runner storage
-        shell: bash
-        run: |
-          ghidra_root="${RUNNER_TEMP}/rea-ghidra"
-          mkdir -p "${ghidra_root}"
-          curl -fsSL --retry 3 --write-out 'ghidra_download_bytes=%{size_download} ghidra_download_seconds=%{time_total}\n' -o "${ghidra_root}/ghidra.zip" "${GHIDRA_RELEASE_URL}"
-          echo "${GHIDRA_RELEASE_SHA256}  ${ghidra_root}/ghidra.zip" | sha256sum -c -
-          unzip -q "${ghidra_root}/ghidra.zip" '*/Ghidra/*.jar' '*/Ghidra/application.properties' -d "${ghidra_root}"
-          rm "${ghidra_root}/ghidra.zip"
-          properties="$(find "${ghidra_root}" -path '*/Ghidra/application.properties' -print -quit)"
-          test -n "${properties}"
-          echo "GHIDRA_INSTALL_DIR=$(dirname "$(dirname "${properties}")")" >> "${GITHUB_ENV}"
-      # JAVA_HOME_<major>_X64 comes from the runner image, not the env context.
-      - name: Compile bridge sources with the verified runner JDK
-        shell: bash
-        run: |
-          java_home_variable="JAVA_HOME_${GHIDRA_JAVA_MAJOR}_X64"
-          test -n "${!java_home_variable}"
-          JAVA_HOME="${!java_home_variable}" npm run verify:ghidra:bridge-sources -- --verified-sdk

.github/workflows/real-cutter.yml

@@ -22,7 +22,7 @@ jobs:
           sudo apt-get update
           sudo apt-get install --no-install-recommends -y g++-mingw-w64-x86-64
       - run: npm run build:windows-native
-      - uses: actions/upload-artifact@ea165f8d65b6e75b540449e92b4886f43607fa02 # v4.6.2
+      - uses: actions/upload-artifact@v4
         with:
           name: cutter-windows-native
           path: native/windows/build/
@@ -53,7 +53,7 @@ jobs:
         uses: ./.github/actions/npm-cache
       - run: npm ci
       - if: matrix.platform == 'Windows'
-        uses: actions/download-artifact@d3f86a106a0bac45b974a628896c90dbdf5c8093 # v4.3.0
+        uses: actions/download-artifact@v4
         with:
           name: cutter-windows-native
           path: native/windows/build/
@@ -67,7 +67,7 @@ jobs:
         env:
           EXPECTED_PLATFORM: ${{ matrix.platform }}
         run: npm run verify:cutter
-      - uses: actions/upload-artifact@ea165f8d65b6e75b540449e92b4886f43607fa02 # v4.6.2
+      - uses: actions/upload-artifact@v4
         if: always()
         with:
           name: cutter-upstream-${{ matrix.platform }}

.github/workflows/real-packet-capture.yml

@@ -53,7 +53,7 @@ jobs:
       - run: sudo apt-get update && sudo DEBIAN_FRONTEND=noninteractive apt-get install -y tshark util-linux python3
       - run: npm ci
       - run: npm run build:cached
-      - run: npm run test:focused -- tests/boundary/captures/fieldDiscovery.test.ts src/process/LinuxResourceLimits.test.ts tests/boundary/captures/captureProvider.test.ts tests/boundary/captures/captureDescriptorCleanup.test.ts tests/boundary/pcap/pcapProvider.test.ts tests/boundary/pcap/pcapProviderCrossPlatform.test.ts tests/boundary/captures/resourceLimits.test.ts tests/boundary/captures/packetOutput.test.ts tests/boundary/mcp/packetCaptureMcp.test.ts tests/boundary/cli/captureCleanup.test.ts
+      - run: npm run test:focused -- tests/boundary/captures/fieldDiscovery.test.ts src/process/LinuxResourceLimits.test.ts tests/boundary/captures/captureProvider.test.ts tests/boundary/captures/captureDescriptorCleanup.test.ts tests/boundary/captures/resourceLimits.test.ts tests/boundary/captures/packetOutput.test.ts tests/boundary/mcp/packetCaptureMcp.test.ts tests/boundary/cli/captureCleanup.test.ts
       - run: node scripts/verify-packet-capture.mjs
         env:
           REA_TSHARK_COMMAND: /usr/bin/tshark

AGENTS.md

@@ -20,8 +20,6 @@ Give each interpretation and resource a clear owner. Consumers must use that own
 
 Keep proof of ownership separate from validity, editability, and readiness. Malformed owned data may still be safely removable. Unresolved identity or applicability must remain unknown rather than be treated as absent, foreign, or aligned.
 
-For lifecycle changes, follow [ownership and completion invariants](docs/tool-design.md#own-the-lifecycle) and select the applicable [lifecycle regressions](docs/testing.md#lifecycle-regressions). Include late handshakes, cancellation during final cleanup, mixed child outcomes, and cleanup retry where those stages exist; active-execution cancellation alone does not cover finalization.
-
 Assess brittleness in touched code during implementation, debugging, review, and maintenance. Fix the producing representation or ownership rule before adding downstream repairs. Normalize once at the owning boundary using format-aware parsers. Remove superseded representations, aliases, wrappers, and redundant tests after verifying affected consumers. Introduce abstractions only when they remove observed complexity.
 
 When fixing a bug, inspect the producing boundary and affected consumers for duplicated interpretation or unclear ownership. Complete any directly related refactor in the same change and remove superseded code. Passing regression tests alone does not establish that the brittleness is resolved. If related cleanup remains, explain what remains and why.

CONTRIBUTING.md

@@ -225,10 +225,7 @@ manifest. A source checkout does not: `native/windows/build/` is ignored by
 Git, and neither `npm ci` nor `npm run build:cached` (or `npm run build`)
 produces `rea-windows-x64.node` or `manifest.json` in that directory.
 Windows workflows and tests that require native controls need these artifacts;
-this includes `run-exclusive` commands, which use the native Job Object to keep
-the artifact lock until every command descendant has exited. Without the
-artifacts, those controls are unavailable even after a successful runtime
-build.
+without them, those controls are unavailable even after a successful runtime build.
 
 Follow the [Windows native build guide](native/windows/README.md#build) before
 running those workflows from source. The artifact build requires Linux,
@@ -258,23 +255,6 @@ The separate GitHub Pages host uses only the manual
 **Settings → Pages → Build and deployment → Source** must be set to
 **GitHub Actions** before deploying there.
 
-### Translation corrections
-
-README editions and website editions have separate translation sources:
-
-- Find the language's `readme` path in the
-  [language inventory](website/locales/languages.json) and edit that file.
-  Locale codes and README suffixes can differ. Use the
-  [English README](README.md) to check commands, requirements, and analysis claims.
-- Edit `msgstr` values in `website/locales/<language>/messages.po` for website
-  text. Follow the [website translation guide](website/locales/README.md) for
-  the Python environment, catalog validation, and local preview. Preserve source
-  strings, contexts, placeholders, commands, paths, and recorded evidence.
-
-Before submitting a website translation, run the catalog and website checks in
-that guide. Translated HTML in `website/_site/` is generated; edit the PO catalog
-rather than the generated pages.
-
 ## Development feedback and PR verification
 
 For routine merges, wait for the required checks to pass for the current PR

README.md

@@ -205,8 +205,7 @@ or update either provider.
 
 Native formats and host support vary by provider. See
 [Hopper and Ghidra setup](docs/installation.md#hopper), the
-[IDA guide](docs/ida-provider.md) (including an optional native MCP bridge), the
-[Kuna decompiler guide](docs/kuna-provider.md), and
+[IDA guide](docs/ida-provider.md) (including an optional native MCP bridge), and
 [experimental Windows Ghidra support](docs/windows-ghidra-p0.md).
 Ghidra also supports [16-bit DOS analysis](docs/ghidra-dos.md).
 For large binaries, raise the provider's startup deadline with
@@ -345,7 +344,7 @@ Report vulnerabilities through [SECURITY.md](SECURITY.md).
 
 ## Star history
 
-🎉 **250,000 GitHub stars — thank you!**
+🎉 **200,000 GitHub stars — thank you!**
 
 Thanks to everyone using REA, reporting bugs, requesting features, testing builds, and contributing fixes.
 

THIRD_PARTY_NOTICES.md

@@ -58,7 +58,6 @@ pin inspection sources; they are not included in the npm package.
 | ghidra-nativeaot               | [MIT](https://github.com/Washi1337/ghidra-nativeaot/blob/effeb734fc570c32650f88b159608979dc7b423e/LICENSE.md)                                                                                                                                            | Pinned inspection source; derived parser attribution above.                                                                                                                                                                 |
 | JADX                           | [Apache-2.0](https://github.com/skylot/jadx/blob/v1.5.6/LICENSE)                                                                                                                                                                                         | The audited jadx-headless-mcp source uses JADX 1.5.6 for Android decompilation; the engine JAR is separately supplied.                                                                                                      |
 | jadx-headless-mcp              | [Apache-2.0](https://github.com/1013503897/jadx-headless-mcp/blob/5844800a486d2248fa949b74c9896285f5b54de2/LICENSE)                                                                                                                                      | v0.7.1; pinned submodule and user-supplied JAR.                                                                                                                                                                             |
-| Kuna                           | [Apache-2.0](https://github.com/Noelo-Lab/kuna/blob/v1.833/LICENSE), with its [NOTICE](https://github.com/Noelo-Lab/kuna/blob/v1.833/NOTICE)                                                                                                             | Bring your own `kuna`; REA verified 1.833 and never downloads, installs or bundles it. REA invokes it as a separate process.                                                                                                |
 | Apktool                        | [Apache-2.0](https://github.com/iBotPeaches/Apktool/blob/master/LICENSE.md)                                                                                                                                                                              | User-supplied Android resource decoder.                                                                                                                                                                                     |
 | Binwalk                        | [MIT](https://github.com/ReFirmLabs/binwalk/blob/4fdab3d464d97b68e0af9088df3f9e2e1545b21c/LICENSE)                                                                                                                                                       | v3.1.0; pinned submodule and user-supplied firmware engine.                                                                                                                                                                 |
 | Unblob                         | [MIT](https://github.com/onekey-sec/unblob/blob/1fcc7a0a584a70a96c31f5a276c20944d199a089/LICENSE)                                                                                                                                                        | 26.6.4; pinned submodule and user-supplied firmware engine.                                                                                                                                                                 |

bridge/cutter/rea_bridge.py

@@ -28,9 +28,9 @@ if os.name == "nt":
 import cutter
 
 try:
-    from PySide6.QtCore import QCoreApplication, QObject, Signal
+    from PySide6.QtCore import QObject, Signal
 except ImportError:
-    from PySide2.QtCore import QCoreApplication, QObject, Signal
+    from PySide2.QtCore import QObject, Signal
 
 
 MAX_FRAME_BYTES = 16 * 1024 * 1024
@@ -326,16 +326,15 @@ class _RequestDispatcher(QObject):
         self._receipt_lock = threading.Lock()
         self.current_file = self._read_current_file()
         try:
-            value = QCoreApplication.applicationVersion()
-            self.cutter_version = value if isinstance(value, str) and value else None
+            self.cutter_version = str(cutter.core().getVersionInformation())
         except Exception:
             self.cutter_version = None
 
     @staticmethod
     def _read_current_file() -> str | None:
         try:
-            value = cutter.core().getConfig("file.path")
-            return value if isinstance(value, str) and value else None
+            value = cutter.core().currentlyOpenFile()
+            return str(value) if value else None
         except Exception:
             return None
 

bridge/ghidra/ReaGhidraBridge.java

@@ -934,7 +934,7 @@ public final class ReaGhidraBridge extends HeadlessScript {
             String value = decompiledText(decompile(function));
             JsonObject result = functionObservation(
                 value == null ? JsonNull.INSTANCE : GSON.toJsonTree(value),
-                functionBoundaryLimitations(
+                noReturnCallLimitations(
                     function,
                     currentProgram.getListing().getInstructions(function.getBody(), true)
                 )
@@ -1027,7 +1027,7 @@ public final class ReaGhidraBridge extends HeadlessScript {
         InstructionScan scan = scanInstructions(function, Integer.MAX_VALUE);
         return functionObservation(
             GSON.toJsonTree(renderAssembly(scan.instructions)),
-            functionBoundaryLimitations(function, scan.instructions)
+            noReturnCallLimitations(function, scan.instructions)
         );
     }
 
@@ -1046,7 +1046,7 @@ public final class ReaGhidraBridge extends HeadlessScript {
         limitations.add(
             "The fast path does not invoke the decompiler or scan whole-program names and strings."
         );
-        List<String> boundaryLimitations = functionBoundaryLimitations(function, scan.instructions);
+        List<String> boundaryLimitations = noReturnCallLimitations(function, scan.instructions);
         for (String limitation : boundaryLimitations) limitations.add(limitation);
         JsonObject result = new JsonObject();
         result.add("procedure", procedureIdentity(function));
@@ -1069,7 +1069,7 @@ public final class ReaGhidraBridge extends HeadlessScript {
             result.add(canonicalAddress(item.getEntryPoint()));
         }
         if (callers) {
-            JsonObject observation = functionObservation(result, functionBoundaryLimitations(function,
+            JsonObject observation = functionObservation(result, noReturnCallLimitations(function,
                 currentProgram.getListing().getInstructions(function.getBody(), true)
             ));
             observation.add("relationship_coverage", callRelationshipCoverage(null,
@@ -1099,7 +1099,7 @@ public final class ReaGhidraBridge extends HeadlessScript {
         result.add("classification", functionClassification(function));
         return functionObservation(
             result,
-            functionBoundaryLimitations(
+            noReturnCallLimitations(
                 function,
                 currentProgram.getListing().getInstructions(function.getBody(), true)
             )
@@ -1131,22 +1131,12 @@ public final class ReaGhidraBridge extends HeadlessScript {
         result.addProperty("direction", direction);
         result.add("references", edges);
         result.addProperty("reference_kinds_available", true);
-        List<String> limitations;
-        JsonArray unresolvedCalls = new JsonArray();
-        if (direction.equals("outgoing")) {
-            CallBoundaryObservation calls = callBoundaryObservation(
+        JsonArray unresolvedCalls = direction.equals("outgoing")
+            ? callBoundaryObservation(
                 function, currentProgram.getListing().getInstructions(function.getBody(), true), null, true, references
-            );
-            unresolvedCalls = calls.unresolvedCalls();
-            limitations = calls.limitations();
-        } else {
-            limitations = functionBoundaryLimitations(
-                function,
-                currentProgram.getListing().getInstructions(function.getBody(), true)
-            );
-        }
+            ).unresolvedCalls() : new JsonArray();
         result.add("unresolved_calls", unresolvedCalls);
-        return functionObservation(result, limitations);
+        return result;
     }
 
     private JsonObject inspectNativeDataType(JsonObject params) throws Exception {
@@ -1347,7 +1337,12 @@ public final class ReaGhidraBridge extends HeadlessScript {
         result.add("references", references);
         if (includeIncoming) {
             TreeMap<String, Reference> incoming = new TreeMap<>();
-            visitObservedReferencesTo(address, reference -> addReference(incoming, reference));
+            ReferenceIterator incomingIterator = currentProgram.getReferenceManager().getReferencesTo(address);
+            while (incomingIterator.hasNext()) {
+                monitor.checkCancelled();
+                Reference reference = incomingIterator.next();
+                if (!reference.isEntryPointReference()) addReference(incoming, reference);
+            }
             List<Reference> orderedIncoming = new ArrayList<>(incoming.values());
             orderedIncoming.sort(REFERENCE_ORDER);
             JsonArray incomingReferences = new JsonArray();
@@ -1399,8 +1394,16 @@ public final class ReaGhidraBridge extends HeadlessScript {
         requireKeys(params, Set.of("document", "address"));
         requireDocument(params);
         Address address = requireAddress(params, "address");
+        ReferenceIterator references = currentProgram.getReferenceManager().getReferencesTo(address);
         Set<Address> sources = new HashSet<>();
-        visitObservedReferencesTo(address, reference -> sources.add(reference.getFromAddress()));
+        while (references.hasNext()) {
+            monitor.checkCancelled();
+            Reference reference = references.next();
+            if (reference.isEntryPointReference()) {
+                continue;
+            }
+            sources.add(reference.getFromAddress());
+            }
         List<Address> ordered = new ArrayList<>(sources);
         ordered.sort(Address::compareTo);
         JsonArray result = new JsonArray();
@@ -3428,27 +3431,51 @@ public final class ReaGhidraBridge extends HeadlessScript {
         return omitted[0];
     }
 
-    private List<String> functionBoundaryLimitations(
+    private List<String> noReturnCallLimitations(
             Function function, Iterable<Instruction> instructions)
             throws Exception {
-        FunctionBoundaryLimitations boundary = new FunctionBoundaryLimitations(function);
-        for (Instruction instruction : instructions) boundary.observe(instruction);
-        return boundary.values();
+        List<String> limitations = new ArrayList<>();
+        Instruction beforePrevious = null;
+        Instruction previous = null;
+        for (Instruction instruction : instructions) {
+            monitor.checkCancelled();
+            String limitation = terminalCallLimitation(instruction);
+            if (limitation != null) limitations.add(limitation);
+            if (beforePrevious != null && previous != null) {
+                String seh = borlandSehHandlerLimitation(
+                    function, beforePrevious, previous, instruction);
+                if (seh != null) limitations.add(seh);
+            }
+            beforePrevious = previous;
+            previous = instruction;
+        }
+        return limitations;
     }
 
     private CallBoundaryObservation callBoundaryObservation(
             Function function, Iterable<Instruction> instructions, Set<Function> returnedCallees,
             boolean includeUnresolvedSites, List<Reference> observedReferences)
             throws Exception {
-        FunctionBoundaryLimitations boundary = new FunctionBoundaryLimitations(function);
+        List<String> limitations = new ArrayList<>();
         CallBoundaryReferences calls = new CallBoundaryReferences(returnedCallees, includeUnresolvedSites);
+        Instruction beforePrevious = null;
+        Instruction previous = null;
         if (observedReferences == null) visitReferences(function, "outgoing", calls::observe);
         else for (Reference reference : observedReferences) {
             monitor.checkCancelled();
             calls.observe(reference);
         }
         for (Instruction instruction : instructions) {
-            boundary.observe(instruction);
+            monitor.checkCancelled();
+            String limitation = terminalCallLimitation(instruction);
+            if (limitation != null) limitations.add(limitation);
+            if (beforePrevious != null && previous != null) {
+                String seh = borlandSehHandlerLimitation(
+                    function, beforePrevious, previous, instruction);
+                if (seh != null) limitations.add(seh);
+            }
+            beforePrevious = previous;
+            previous = instruction;
             if (!instruction.getFlowType().isCall()) continue;
             boolean destination = false;
             for (Reference reference : instruction.getReferencesFrom()) {
@@ -3462,38 +3489,10 @@ public final class ReaGhidraBridge extends HeadlessScript {
                     "Instruction decoder identifies a call but ReferenceManager supplies no call destination");
             }
         }
-        return new CallBoundaryObservation(boundary.values(),
+        return new CallBoundaryObservation(List.copyOf(limitations),
             returnedCallees == null ? null : calls.unrepresented, calls.unresolvedCalls());
     }
 
-    private final class FunctionBoundaryLimitations {
-        private final Function function;
-        private final List<String> limitations = new ArrayList<>();
-        private Instruction beforePrevious;
-        private Instruction previous;
-
-        private FunctionBoundaryLimitations(Function function) {
-            this.function = function;
-        }
-
-        private void observe(Instruction instruction) throws Exception {
-            monitor.checkCancelled();
-            String limitation = terminalCallLimitation(instruction);
-            if (limitation != null) limitations.add(limitation);
-            if (beforePrevious != null && previous != null) {
-                String seh = borlandSehHandlerLimitation(
-                    function, beforePrevious, previous, instruction);
-                if (seh != null) limitations.add(seh);
-            }
-            beforePrevious = previous;
-            previous = instruction;
-        }
-
-        private List<String> values() {
-            return List.copyOf(limitations);
-        }
-    }
-
     private String borlandSehHandlerLimitation(
             Function function, Instruction handlerPush, Instruction framePush,
             Instruction frameLink) {
@@ -3675,36 +3674,24 @@ public final class ReaGhidraBridge extends HeadlessScript {
             monitor.checkCancelled();
             Address address = addresses.next();
             if (outgoing) {
-                visitObservedReferencesFrom(address, visitor);
+                for (Reference reference : currentProgram.getReferenceManager()
+                        .getReferencesFrom(address)) {
+                    monitor.checkCancelled();
+                    if (!reference.isEntryPointReference()) visitor.accept(reference);
+                }
             }
             else {
-                visitObservedReferencesTo(address, visitor);
+                ReferenceIterator iterator = currentProgram.getReferenceManager()
+                    .getReferencesTo(address);
+                while (iterator.hasNext()) {
+                    monitor.checkCancelled();
+                    Reference reference = iterator.next();
+                    if (!reference.isEntryPointReference()) visitor.accept(reference);
+                }
             }
         }
     }
 
-    private void visitObservedReferencesFrom(Address address, ReferenceVisitor visitor)
-            throws Exception {
-        for (Reference reference : currentProgram.getReferenceManager().getReferencesFrom(address)) {
-            monitor.checkCancelled();
-            visitObservedReference(reference, visitor);
-        }
-    }
-
-    private void visitObservedReferencesTo(Address address, ReferenceVisitor visitor)
-            throws Exception {
-        ReferenceIterator references = currentProgram.getReferenceManager().getReferencesTo(address);
-        while (references.hasNext()) {
-            monitor.checkCancelled();
-            visitObservedReference(references.next(), visitor);
-        }
-    }
-
-    private static void visitObservedReference(Reference reference, ReferenceVisitor visitor)
-            throws Exception {
-        if (!reference.isEntryPointReference()) visitor.accept(reference);
-    }
-
     private static void addReference(TreeMap<String, Reference> observed, Reference reference) {
         String key = canonicalAddress(reference.getFromAddress()) + "\u0000" +
             canonicalAddress(reference.getToAddress()) + "\u0000" +

bridge/hopper_bridge.py

@@ -1057,10 +1057,6 @@ def _serve_connection(connection):
                 ):
                     raise PermissionError("Invalid bridge capability")
                 authenticated = True
-                # The connection grace period only bounds unauthenticated idle
-                # clients. Native analysis and a connected owner's idle time
-                # remain unbounded after capability validation.
-                connection.settimeout(None)
                 _write_message(file, {"id": request_id, "event": {
                     "type": "progress",
                     "phase": "hopper_bridge",
@@ -1152,17 +1148,13 @@ def _run():
     server.bind(REA_SOCKET)
     os.chmod(REA_SOCKET, 0o600)
     server.listen(1)
-    # A bridge can start after its caller's startup/cleanup deadline. Bound
-    # the first accept as well as reconnects so an orphan cannot pin Hopper's
-    # dedicated Python thread and prevent later documents from starting REA.
-    server.settimeout(REA_RECONNECT_TIMEOUT_SECONDS)
     try:
         while True:
             try:
                 connection, _ = server.accept()
             except socket.timeout:
                 break
-            connection.settimeout(REA_RECONNECT_TIMEOUT_SECONDS)
+            connection.settimeout(None)
             if _serve_connection(connection):
                 break
             # Match REA's cleanup handshake budget without pinning Hopper's

bridge/native/rea_lldb_tracer.py

@@ -555,38 +555,6 @@ def _failed_launch_description(process):
     return None
 
 
-def _retire_failed_launch(process, config, listener, stdout, stderr):
-    """Reconcile an SBProcess returned alongside a failed Launch error."""
-    if not process.IsValid():
-        stdout.close()
-        stderr.close()
-        return False
-
-    pid = process.GetProcessID()
-    if pid > 0:
-        # Even an already-exited process needs its PID published so the host
-        # can distinguish a completed launch failure from an unknown target.
-        with open(config["pid_path"], "w") as handle:
-            handle.write(str(pid))
-
-    if process.GetState() != lldb.eStateExited:
-        stdout.mark_launched()
-        stderr.mark_launched()
-        if pid > 0:
-            # Hold a surviving target until the host has captured its start
-            # identity. If that proof is unavailable, Kill still addresses
-            # this exact SBProcess created by the current launch request.
-            _wait_for_identity_ack(config)
-        process.Kill()
-        _wait_for_exit(listener, process, 5)
-
-    exit_observed = process.GetState() == lldb.eStateExited
-    expected_exit = exit_observed
-    stdout.close(expected_exit=expected_exit)
-    stderr.close(expected_exit=expected_exit)
-    return exit_observed
-
-
 def trace(debugger, config):
     global _TRACE_CONTEXT
     debugger.SetAsync(True)
@@ -662,9 +630,8 @@ def trace(debugger, config):
             )
         process = target.Launch(_launch_info(target, config, listener), error)
         if not error.Success() or not process.IsValid():
-            exit_observed = _retire_failed_launch(
-                process, config, listener, stdout, stderr
-            )
+            stdout.close()
+            stderr.close()
             return {
                 "status": "launch-error",
                 "error": error.GetCString(),
@@ -673,26 +640,15 @@ def trace(debugger, config):
                     if process.IsValid()
                     else {}
                 ),
-                **(
-                    {"target_process_exit_observed": True}
-                    if exit_observed
-                    else {}
-                ),
             }
         launch_failure = _failed_launch_description(process)
         if launch_failure is not None:
-            exit_observed = _retire_failed_launch(
-                process, config, listener, stdout, stderr
-            )
+            stdout.close(expected_exit=True)
+            stderr.close(expected_exit=True)
             return {
                 "status": "launch-error",
                 "error": launch_failure,
                 "target_process_created": True,
-                **(
-                    {"target_process_exit_observed": True}
-                    if exit_observed
-                    else {}
-                ),
             }
         stdout.mark_launched()
         stderr.mark_launched()

bridge/native/test_rea_lldb_tracer.py

@@ -15,8 +15,6 @@ fake_lldb = sys.modules.setdefault("lldb", types.ModuleType("lldb"))
 fake_lldb.LLDB_INVALID_ADDRESS = -1
 fake_lldb.eLaunchFlagDebug = 2
 fake_lldb.eLaunchFlagStopAtEntry = 4
-fake_lldb.eStateExited = 10
-fake_lldb.SBEvent = lambda: object()
 spec = importlib.util.spec_from_file_location(
     "rea_lldb_tracer", os.path.join(os.path.dirname(__file__), "rea_lldb_tracer.py")
 )
@@ -25,136 +23,6 @@ spec.loader.exec_module(tracer)
 
 
 class NativeTraceBudgetTests(unittest.TestCase):
-    def test_failed_launch_does_not_infer_exit_from_a_failed_kill(self):
-        class Process:
-            def IsValid(self):
-                return True
-
-            def GetProcessID(self):
-                return 12345
-
-            def GetState(self):
-                return 6
-
-            def Kill(self):
-                return None
-
-        class Sink:
-            close_exit = None
-
-            def mark_launched(self):
-                pass
-
-            def close(self, expected_exit=False):
-                self.close_exit = expected_exit
-
-        with tempfile.TemporaryDirectory() as directory:
-            stdout, stderr = Sink(), Sink()
-            with patch.object(tracer, "_wait_for_identity_ack", return_value="unavailable"), patch.object(
-                tracer, "_wait_for_exit", return_value=None
-            ):
-                exited = tracer._retire_failed_launch(
-                    Process(), {"pid_path": os.path.join(directory, "pid")}, object(), stdout, stderr
-                )
-        self.assertFalse(exited)
-        self.assertFalse(stdout.close_exit)
-        self.assertFalse(stderr.close_exit)
-
-    def test_failed_launch_publishes_pid_and_retires_live_process(self):
-        class Process:
-            state = 6
-            killed = False
-
-            def IsValid(self):
-                return True
-
-            def GetProcessID(self):
-                return 12345
-
-            def GetState(self):
-                return self.state
-
-            def Kill(self):
-                self.killed = True
-                self.state = tracer.lldb.eStateExited
-
-        class Sink:
-            launched = False
-            close_exit = None
-
-            def mark_launched(self):
-                self.launched = True
-
-            def close(self, expected_exit=False):
-                self.close_exit = expected_exit
-
-        with tempfile.TemporaryDirectory() as directory:
-            pid_path = os.path.join(directory, "pid")
-            process = Process()
-            stdout, stderr = Sink(), Sink()
-
-            def acknowledge(config):
-                with open(config["pid_path"], "r") as pid_file:
-                    self.assertEqual(pid_file.read(), "12345")
-                return "readable"
-
-            with patch.object(tracer, "_wait_for_identity_ack", acknowledge):
-                exited = tracer._retire_failed_launch(
-                    process,
-                    {"pid_path": pid_path},
-                    object(),
-                    stdout,
-                    stderr,
-                )
-
-        self.assertTrue(exited)
-        self.assertTrue(process.killed)
-        self.assertTrue(stdout.launched)
-        self.assertTrue(stderr.launched)
-        self.assertTrue(stdout.close_exit)
-        self.assertTrue(stderr.close_exit)
-
-    def test_failed_launch_records_when_valid_process_is_already_exited(self):
-        class Process:
-            def IsValid(self):
-                return True
-
-            def GetProcessID(self):
-                return 12345
-
-            def GetState(self):
-                return tracer.lldb.eStateExited
-
-            def Kill(self):
-                raise AssertionError("an exited process must not be killed")
-
-        class Sink:
-            close_exit = None
-
-            def mark_launched(self):
-                raise AssertionError("an exited process has no output to drain")
-
-            def close(self, expected_exit=False):
-                self.close_exit = expected_exit
-
-        with tempfile.TemporaryDirectory() as directory:
-            pid_path = os.path.join(directory, "pid")
-            stdout, stderr = Sink(), Sink()
-            with patch.object(
-                tracer,
-                "_wait_for_identity_ack",
-                side_effect=AssertionError("exit is already observed"),
-            ):
-                exited = tracer._retire_failed_launch(
-                    Process(), {"pid_path": pid_path}, object(), stdout, stderr
-                )
-            with open(pid_path, "r") as pid_file:
-                self.assertEqual(pid_file.read(), "12345")
-
-        self.assertTrue(exited)
-        self.assertTrue(stdout.close_exit)
-        self.assertTrue(stderr.close_exit)
-
     def test_pre_target_integrity_failure_reports_no_process_created(self):
         original_debugger = getattr(tracer.lldb, "SBDebugger", None)
 

docs/.vitepress/config.ts

@@ -60,7 +60,6 @@ export default defineConfig({
         collapsed: true,
         items: [
           { text: "IDA", link: "/ida-provider" },
-          { text: "Kuna", link: "/kuna-provider" },
           { text: "Ghidra on Windows", link: "/windows-ghidra-p0" },
           { text: "Ghidra DOS analysis", link: "/ghidra-dos" },
           { text: "Ghidra raw binary", link: "/raw-binary" },

docs/adb-device-analysis.md

@@ -103,24 +103,11 @@ existing analysis families directly, for example
 | `start_adb_activity`    | **mutates device** | Starts an intent (`am start -a` with optional URI, component, and up to 16 typed extras); preserves the activity manager's verdict                                                                                                    |
 | `stop_adb_app`          | **mutates device** | Force-stops every process of a package, ending a dynamic-analysis run                                                                                                                                                                 |
 
-For `inspect_adb_window`, an explicitly printed null focus reference becomes
-JSON `null`. `observed_lines` retains the original focus declarations, including
-their field names, so explicit absence can be distinguished from omitted
-declarations. REA reads the displays section only when the windows section
-declares neither focus field. If both sections omit them, focus remains unknown.
-
 For `install_adb_package`, `replace_requested` records whether `-r` was sent.
 The `replaced` result is `null`: the successful install response does not say
 whether the package was installed fresh or replaced, and REA does not query the
 device first. The install verdict and host APK digest remain available.
 
-Push and install consume a private snapshot of the selected local input. The
-reported size and SHA-256 identify those consumed bytes; `local_path` and
-`apk_path` retain the original input path, whose contents may change later.
-Snapshot creation needs temporary disk space proportional to the input size.
-Failed snapshot cleanup remains owned and is retried before later operations
-and during shutdown.
-
 ## Interpret the result
 
 - **Directory names retain whitespace and newlines.** Symlink targets do too,
@@ -159,10 +146,8 @@ and during shutdown.
 - **Mutations are explicit.** `push_adb_file`, `install_adb_package`, and
   `uninstall_adb_package` declare `mutatesTarget` and never run implicitly:
   pushes check for existing device files before transfer and refuse them
-  unless `overwrite` is set. A failed or unexpected existence probe stops
-  transfer even with `overwrite`; only a clean `test -e` exit of 1 with no
-  output is interpreted as absence. The check is not atomic, so a different
-  process can create the path before `adb push` writes it. When available, the device's
+  unless `overwrite` is set. The check is not atomic, so a different process
+  can create the path before `adb push` writes it. When available, the device's
   `sha256sum` verifies the transfer; installs preserve the
   device's `Failure [...]` reason verbatim.
 - **Producer identity stays attached.** Every result embeds the producing
@@ -175,19 +160,14 @@ and during shutdown.
   The app/activity lifecycle tools use `am start -W` and `am force-stop`.
 - Per-invocation budgets: client/devices 10-20 s, shell reads 20-60 s with
   64 KiB-8 MiB capture caps (logcat 4 MiB, screen 32 MiB), transfers and
-  bugreports 600 s. Output capture overflow reports `resource_constraint`;
-  deadline expiration, including the client-version probe, reports
-  `provider_timeout`. Command cancellation preserves the caller's exact reason;
-  a later abort does not replace an already completed command failure.
+  bugreports 600 s. Exceeded budgets report `resource_constraint`; stopped
+  commands report `provider_timeout`.
 - Pull and capture outputs are additive: the destination must not already
   exist. Re-running a completed pull refuses the existing directory instead
   of overwriting evidence.
 - Cancellation during a package pull preserves caller-selected output. The
   error includes partial observations identifying completed artifacts and the
   interrupted local path; remaining APKs were not attempted.
-- Screen capture checks cancellation before publishing its exclusive output.
-  If cancellation arrives after publication, the error retains the committed
-  file's path, digest and dimensions; the file remains available as evidence.
 - Bugreports collect into isolated staging and publish with exclusive creation;
   filename collisions select the next numeric suffix. If publication fails, the
   completed archive remains in staging. The error's partial observation gives

docs/android-analysis.md

@@ -300,25 +300,8 @@ down to MiB and retains exact bytes, Java version and visible processors in its
 raw runtime response. The observed allocatable heap can differ from configured
 `-Xmx`, especially with Serial GC. Heap is not a total RSS cap: the JVM also
 uses native memory. Independent REA instances have independent queues. Whole
-operations have a **120-second** execution deadline by default, starting after
-they reach the queue's front. For a known slow cold load, such as a large
-multidex APK, select another finite deadline:
-
-```sh
-export REA_JADX_OPERATION_TIMEOUT_MS=600000
-```
-
-The value must be a decimal millisecond count from 1 to 2147483647; anything
-else is refused before Java starts. The same deadline bounds each upstream
-call, a timeout reports the selected value, and a passing JADX configuration
-check in `rea doctor` reports the effective `operation_timeout_ms`. Explicit
-cancellation still ends the operation immediately, and partial observations
-and owned-process cleanup are unchanged. Raising the deadline does not extend
-the bridge's 30-second startup handshake or the upstream **90-second**
-decompilation limit. MCP clients enforce their own tool-call timeouts, and
-setup's derived [client tool timeout](client-configuration.md) does not include
-this setting, so also raise the client timeout when selecting a longer
-deadline.
+operations have a **120-second** execution deadline after reaching the queue's
+front; upstream decompilation is limited to **90 seconds**.
 
 Decoded manifest and method text have a **1 MiB** upstream byte budget and report
 truncation. Class-name pages use indexed slices of up to 4,096 names without changing the

docs/architecture.mermaid

@@ -26,7 +26,6 @@ graph TD
     end
 
     subgraph "Provider Layers"
-        PROVIDER_OWNERS["src/providers/<br/>shared deferred client and inspection owners<br/>exact cleanup retry and attributed failures"]
         PWNTOOLS["src/native/pwntools/ + src/native/pwndbg/<br/>BYO offline ELF/core adapters<br/>owned snapshots/Python and optional core-only GDB<br/>unchanged upstream parsers, ABI structures and mapping API"]
         WASM["src/wasm/<br/>caller-supplied WABT; immutable artifact inspection<br/>owned process supervision and retryable workspace cleanup"]
         EVM["src/evm/<br/>unchanged EVMole/WASM in bounded owned worker<br/>explicit carrier parsing and inferred interface adapter"]
@@ -139,11 +138,6 @@ graph TD
     GHIDRA --> GHIDRA_BRIDGE
     HOPPER --> PROCESS
     GHIDRA --> PROCESS
-    GHIDRA --> PROVIDER_OWNERS
-    APP --> PROVIDER_OWNERS
-    PROVIDER_OWNERS --> PROCESS
-    PROVIDER_OWNERS --> AUX
-    PROVIDER_OWNERS --> DOMAIN
     GHIDRA --> WINDOWS
     PROCESS --> WINDOWS
     WINDOWS --> WINDOWS_NATIVE

docs/binary-diagnostics.md

@@ -147,24 +147,6 @@ received signal alone does not establish its exact cause. Dynamic tags require
 a complete DT_NULL inside PT_DYNAMIC; interpreter names and ranges end at the
 first NUL, with any padding still represented by the original segment range.
 
-## Ghidra process failures
-
-When output from the failing Ghidra startup or operation reports
-`java.lang.OutOfMemoryError`, REA returns `resource_constraint`. Java heap or GC
-overhead exhaustion includes heap-specific recovery advice. Metaspace and array
-size failures do not recommend increasing the heap; native-thread exhaustion is
-reported as a capacity constraint with unknown limits.
-
-`configured_jvm_max_heap` records the explicit `-Xmx` value selected by REA's
-launch builder. It is a configuration fact, not measured memory use or proof of
-the effective JVM limit; JVM environment options may affect that limit.
-When a Windows script wrapper selects the JVM, this value remains unknown.
-Historical stdout and stderr remain available, but classification uses only the
-failing operation's `failure_output`. Output draining waits at most one second,
-subject to earlier cancellation or the startup deadline. `output_incomplete`
-marks a snapshot taken before stream closure; cleanup ownership remains with
-the session until release succeeds.
-
 ## Portable PE resources
 
 `inspect_pe_resources` / `inspect-pe-resources` inspects an explicit PE32 or

docs/browser-observation.md

@@ -66,25 +66,14 @@ Electron `file://` pages use a separate provider and target boundary; see [elect
 
 ## Provider authorities
 
-CDP page capture and V8 Inspector observation attach to an already-running
-target without launching it, driving actions, or evaluating target code.
-Playwright scenarios drive actions and capture step snapshots in either a
-provider-owned browser or a caller-selected external browser. Separate providers
-preserve these authority and lifecycle differences. They share one exclusion
-vocabulary (`BrowserExclusionReason`): every denial reason maps onto it, even
-where a wire schema keeps a narrower historical bucket.
-
-CDP attachment is not a guarantee that the browser preserves all state.
-Chromium can clear another client's `navigator.platform` emulation when REA's
-page session disconnects, even if that session sent no emulation commands.
-This affects page inspection, bundle capture, session observation, screenshots,
-WebMCP discovery, and Electron page inspection; target listing alone does not
-attach a page session. REA cannot read the other client's complete
-user-agent/client-hint configuration and does not replay guessed settings.
-Use a disposable browser when preserving externally configured emulation is
-required, or have the owning client reapply its complete configuration afterward.
-See [the reproduction and Chromium ownership limitation](https://github.com/morluto/rea/issues/4089).
-
+CDP page capture, V8 Inspector observation, and Playwright scenarios stay
+separate providers because their authorities differ: CDP and V8 attach to an
+already-running target and never launch, drive, evaluate, or mutate it, while
+Playwright providers own and drive the runtime (launch browsers, run actions,
+capture step snapshots). Merging them would mix attach-only and owned-process
+lifecycles in one contract. What they share instead is one exclusion
+vocabulary (`BrowserExclusionReason`): every denial reason in every stack maps
+onto it, even where a wire schema keeps a narrower historical bucket.
 Existing static application Evidence and passive web/Electron captures can be
 combined later through
 [JavaScript static/runtime reconciliation](javascript-runtime-reconciliation.md).
@@ -320,7 +309,7 @@ REA retains local observation data and removes only URL userinfo credentials, ex
   an omitted type leaves equality unknown rather than proving a modification.
 - Console observations with a stack source retain call type, argument types, timestamp, and source location. When console text capture is selected, already-delivered primitive values are retained verbatim; objects, getters, and remote properties are never expanded.
 - WebSocket observations retain direction, opcode, and payload byte length. When shape capture is selected, text frames are classified as text or complete value-free JSON shape; binary bytes, hashes, prefixes, and raw frames are never retained.
-- Storage observations always redact values. Key names, IndexedDB names, and cache names require `include_storage_keys`; stable content fingerprints require the additional `include_storage_fingerprints` selection. Cookie fingerprints cover cookies applicable to the current main-frame URL, including its path, rather than every cookie path on that origin. Other storage remains scoped to the origin. Cache fingerprints hash all decoded response bytes, including bodies above 64 KiB, subject to the [64 MiB per-message CDP limit](#request-boundary). Missing or undecodable cache bodies and partial IndexedDB remote objects make fingerprint coverage incomplete, so identical observations remain `unknown`.
+- Storage observations always redact values. Key names, IndexedDB names, and cache names require `include_storage_keys`; stable content fingerprints require the additional `include_storage_fingerprints` selection. Cookie fingerprints cover cookies applicable to the current main-frame URL, including its path, rather than every cookie path on that origin. Other storage remains scoped to the origin. Cache bodies above 64 KiB and partial IndexedDB remote objects make fingerprint coverage incomplete, so identical observations remain `unknown`.
 - Unavailable or malformed storage inventories mark `storage_keys` unavailable, even without fingerprints. Comparisons suppress inferred key additions and removals while preserving modifications proven by complete fingerprints on both sides. Previously exported captures are not retroactively corrected; recapture them to obtain these coverage markers.
 - Script metadata is included only when CDP supplies a URL on an allowed origin. Stable keys exclude transient CDP script IDs, and exact transient raw URLs are used only during script/resource reconciliation. URL-less scripts are excluded because their origin cannot be established. When CDP supplies an execution-context association, the accepted script retains its authorized frame ID for later attribution. Script metadata admission bounds retained identity and source-map strings to 8 MiB and 50,000 records. When a source-map URL cannot fit, the script identity remains and source-map coverage reports `resource_budget_exhausted`; rejected script observations are counted without retaining their IDs. Source content is omitted unless explicitly requested and is returned inline as a self-verifying artifact with its SHA-256 digest.
 
@@ -354,10 +343,8 @@ an invalid supplied size remains unknown with incomplete resource coverage while
 the resource's other facts are retained. Zero and nonnegative fractional sizes
 are preserved.
 
-CDP discovery has a 10-second deadline. Each WebSocket handshake and command
-response has its own 20-second deadline, separate from the caller-selected
-observation window. A stalled handshake or command reports `provider_timeout`;
-caller cancellation still reports cancellation. WebSocket messages remain subject
+CDP discovery, connection, and commands wait for the peer or caller cancellation;
+a stalled peer can leave an operation waiting. WebSocket messages remain subject
 to the [64 MiB limit](#request-boundary). REA does not impose a message-count or
 pending-command quota. On cancellation, it closes only its own WebSocket,
 waiting up to one second before terminating it. Malformed unsolicited events

docs/browser-scenario-contract.md

@@ -144,24 +144,6 @@ distinction: it closes and deletes provider-owned profiles, but only disconnects
 from an external CDP browser. Real-browser verification checks both outcomes and
 confirms that an attached external browser remains alive.
 
-Keeping that browser alive does not guarantee its emulation state survives.
-Chromium can clear caller-owned `navigator.platform` emulation when a page CDP
-session disconnects, including sessions that sent no emulation commands. REA
-cannot snapshot the other client's complete user-agent/client-hint settings and
-does not replay a partial reconstruction. Use launch mode to keep this effect
-inside a provider-owned browser, or have the external owning client reapply its
-complete configuration after capture. Connected captures report this limitation;
-see [issue #4089](https://github.com/morluto/rea/issues/4089).
-
-`environment.locale` sets Intl formatting in both modes. Launch also sets
-`navigator.language`, `navigator.languages`, and the request `Accept-Language`.
-Connect preserves the caller's page and request languages; every attached
-capture identifies this locale limitation, including retained partial
-observations. Use launch mode when the application must select the requested
-language through navigator values or request headers. Artifact completeness
-covers the selected observations, not equivalence of launch and connect
-language environments.
-
 HTTP(S) URLs may include ordinary query values and fragments directly. Use
 ordered structured query entries when a value needs to reference a declared
 environment-backed secret. Form, storage, and cookie values are either literal

docs/cli.md

@@ -95,9 +95,8 @@ dependency edges, and the section's file range. A missing `.dep-v0` section is
 null metadata, not proof that the binary has no dependencies. See
 [Rust binaries](rust-binaries.md).
 
-Configure [Hopper or Ghidra](installation.md#hopper), the
-[IDA adapter](ida-provider.md), or [Kuna](kuna-provider.md) before analyzing a
-native target. Substitute
+Configure [Hopper or Ghidra](installation.md#hopper), or the
+[IDA adapter](ida-provider.md), before analyzing a native target. Substitute
 your target, search text and function name or address in these examples:
 
 ```bash
@@ -168,12 +167,6 @@ be verified. See [MCP contracts](mcp-contracts.md) for session lifecycle and
 [Ghidra first-query deadlines](mcp-contracts.md#ghidra-first-query-deadlines-and-recovery)
 for import, client timeouts and recovery.
 
-If one-shot analysis fails and closing its session also fails, the original
-error details remain inline and `details.cleanup_error` describes the later
-close failure. Each diagnostic retains its own reported resources; the later
-failure does not establish whether an earlier resource was released. Captured
-output and partial observations remain in the original details.
-
 ## Save and reuse analysis snapshots
 
 A snapshot retains successful analysis results for later queries. REA reuses
@@ -321,9 +314,7 @@ diagnostics appear inside the report when `--full-output` is selected. Log
 truncation alone does not change the diagnostic health or exit status.
 
 The default terminal format is TOON. Use `--json` when saving results for a
-JSON consumer. Valued output flags (`--format`, `--filter-output`,
-`--token-limit`, `--token-offset`) accept `--flag value` or `--flag=value`; a
-missing value fails with `MISSING_OUTPUT_VALUE` before the command runs. `--json` is indented on a terminal and compact when piped or
+JSON consumer. `--json` is indented on a terminal and compact when piped or
 redirected, which keeps large results smaller for agents and scripts; pipe
 through `jq .` for indented files. Output selection and formatting do not change
 operation status.
@@ -361,11 +352,6 @@ command, objdump, Rizin and GDB. In these paths, a returned structured
 signal-derived status. This describes the current source routing; it is not a
 claim that every command or provider runtime has been independently exercised.
 
-When the reader of piped output closes early, as `rea ... | head` does, the
-CLI stops writing, prints no error and exits `141` (`128 + 13`, the status of a
-SIGPIPE-terminated writer). The operation itself may have completed; only its
-output was declined.
-
 `inspect-artifact` also returns a structured cancelled result, but its direct
 analysis cancellation path does not set a signal-derived exit status, so it
 exits `1`. Setup has its own contract: cancellation exits `0`. Treat the

docs/client-configuration.md

@@ -52,16 +52,10 @@ in the file the installed app reads:
   `%APPDATA%` file it still reads; with neither file, setup creates the
   private copy.
 - If `%LOCALAPPDATA%\Packages` holds a `Claude_<publisher ID>` package from
-  another publisher, an `AnthropicPBC.Claude_<publisher ID>` package, or cannot
-  be read, REA cannot establish which file Claude
+  another publisher, or cannot be read, REA cannot establish which file Claude
   Desktop reads. Setup, doctor and uninstall report that instead of falling
   back to `%APPDATA%`. Doctor then reports `claude_desktop` as invalid, and
   uninstall stops before removing anything for any client.
-  The reported `AnthropicPBC.Claude_fnn82j28hfe8t` build can use the `Claude-3p`
-  deployment directory. REA recognizes that package as an unresolved location;
-  it does not assume that it reads the legacy AppData file or automatically
-  register in `Claude-3p`. See [#4432](https://github.com/morluto/rea/issues/4432)
-  for the reported build and manual registration evidence.
 
 Quit Claude Desktop fully before approving setup; closing its window is not
 enough. A running Claude Desktop can rewrite its configuration from memory and
@@ -146,26 +140,8 @@ profiles](mcp-contracts.md#output-schemas).
 Setup registers `rea` in `~/.kimi-code/mcp.json`, or
 `$KIMI_CODE_HOME/mcp.json` when set, while preserving unrelated settings and
 creating a `.rea.backup` before updating an existing file. Kimi Code infers
-stdio from the `command` entry, so setup does not add a `type` field. New
-registrations include `startupTimeoutMs = 30000` and a `toolTimeoutMs` derived
-from REA's known provider allowance plus 120 seconds of operation
-headroom. The default is 450000 ms, covering the default 330-second Ghidra
-startup; an explicit Ghidra startup timeout of 2700000 ms produces a 2820000 ms
-tool timeout. The startup allowance follows an explicitly selected Ghidra or
-Hopper provider, and otherwise uses the larger known Ghidra/Hopper deadline.
-An explicit `REA_JEB_MCP_TIMEOUT_MS` request budget also contributes to that
-maximum. For `ida` or `auto` selection, a valid IDA registration's parsed
-`timeoutMs` also contributes to that maximum; its default is 300000 ms.
-Setup forwards these explicitly selected REA deadlines and the input schema
-profile into the registration; unrelated process values are omitted. An
-explicit `REA_JADX_OPERATION_TIMEOUT_MS` is forwarded with the JADX
-registration but does not contribute to the derived tool timeout; raise
-`toolTimeoutMs` to cover a longer selected JADX deadline.
-This headroom is a practical default, not a guarantee for every analysis
-duration. Setup preserves positive timeout values already in the `rea` entry.
-You can edit `startupTimeoutMs` and `toolTimeoutMs` there; doctor keeps positive
-caller-selected values aligned and reports a non-blocking advisory when a tool
-timeout is shorter than the known provider allowance.
+stdio from the `command` entry, so setup does not add a `type` field. The
+registration includes `startupTimeoutMs = 30000` and `toolTimeoutMs = 120000`.
 Setup selects the compact input-schema advertisement for new or refreshed Kimi
 registrations unless their stored configuration or setup environment explicitly
 selects `REA_MCP_INPUT_SCHEMA_PROFILE=full` or `compact`. This keeps REA's
@@ -243,23 +219,8 @@ standalone CLI check.
 
 ## Codex and Devin
 
-Codex treats an unset or empty `CODEX_HOME` as `~/.codex`. Its MCP server
-registration supports `startup_timeout_sec` for connection initialization and
-`tool_timeout_sec` for each tool call. New REA registrations use a 30-second
-startup timeout and a tool timeout derived from the known provider
-allowance plus 120 seconds of operation headroom. This yields 450 seconds for
-the default Ghidra allowance; an explicit Ghidra startup timeout of 2700
-seconds yields 2820 seconds. Setup preserves positive caller-selected timeout
-values in the REA entry, and doctor reports a non-blocking advisory when a tool
-timeout is shorter than the known provider allowance. An explicitly selected
-JEB request budget also contributes to the allowance. A configured IDA
-registration's parsed `timeoutMs` contributes for `ida` or `auto` selection.
-An explicit `REA_JADX_OPERATION_TIMEOUT_MS` is forwarded with the JADX
-registration but does not contribute; raise `tool_timeout_sec` to cover a
-longer selected JADX deadline.
-These values are client-side deadlines, so increase them in `~/.codex/config.toml` if a
-workload needs more time. Devin honors `XDG_CONFIG_HOME` for its
-`devin/mcp_config.json` on non-Windows systems.
+Codex treats an unset or empty `CODEX_HOME` as `~/.codex`. Devin honors
+`XDG_CONFIG_HOME` for its `devin/mcp_config.json` on non-Windows systems.
 
 ## OMP
 

docs/electron-observation.md

@@ -2,12 +2,6 @@
 
 REA can attach to an Electron/Chromium CDP endpoint and inspect existing `file://` renderer pages without evaluating JavaScript or invoking Electron APIs. The request supplies the endpoint directly; REA accepts only literal-port loopback HTTP endpoints. Selecting an endpoint exposes every Electron target it serves, including local file paths and page metadata.
 
-Disconnecting the inspection's page session can clear caller-owned
-`navigator.platform` emulation inside Chromium. REA cannot restore another
-client's complete user-agent/client-hint configuration. Use a disposable target
-or let the owning client reapply its configuration; see the shared
-[CDP state limitation](browser-observation.md#provider-authorities).
-
 This passive runtime surface is distinct from the target-free static
 [`analyze_javascript_application`](javascript-artifact-reconstruction.md)
 workflow. Static analysis reads a local ASAR or extracted directory without
@@ -107,18 +101,8 @@ scenario controls; their attempted and observed outcomes remain in the
 timeline. The active hook blocks and records external shell/navigation,
 permission, download, popup, updater, and OS-integration effects. The timeline
 is explicitly partial when attachment starts after application activity. The
-startup, including the initial state snapshot, has a 60-second deadline.
-Actions wait until completion or request cancellation; a click whose target
-never appears, or a `wait` without `window_index` in an app that opens no
-window, remains pending until cancelled. After cancellation, the final state
-read has 5 seconds before REA keeps the initial snapshot instead; the
-cancellation keeps the caller's reason and records that expiry in its
-diagnostics.
-Blocked synchronous shell APIs keep their return contracts:
-`showItemInFolder` returns `undefined` and `writeShortcutLink` returns `false`.
-Their `shell-attempt` events record the blocked phase and argument shapes;
-neither result means the requested host operation occurred. The existing
-`openExternal` and `openPath` blocks continue to reject their promises.
+startup has a 60-second deadline. Actions wait until completion or request
+cancellation; a click whose target never appears remains pending until cancelled.
 CLI SIGINT/SIGTERM requests cancellation and awaits owned-process cleanup.
 Window IDs, URLs, and cached titles come from one main-process Electron snapshot,
 so a crashed renderer does not require a successful renderer-side title query.
@@ -132,69 +116,6 @@ If cleanup cannot be verified, the error retains collected observations in
 `details.partial_observation` and marks their application cleanup `unverified`.
 Cleanup uncertainty does not authorize signaling unrelated processes.
 
-Main-process IPC recording keeps original-function removal for `on` and `once`
-registrations and records a fired `once` callback once. Native Node.js owns
-`once` registration, firing and callable dispatch as well as removal order and
-traversal, including listeners registered by removal observers;
-the hook translates only its own recording wrappers at the removal boundary.
-Wrapper metadata uses weak keys and does not retain removed registrations.
-Wrapper metadata operations, private collection methods and traversal constructors are captured
-before target startup; later replacement of their global bindings does not
-change listener registration or removal.
-
-Native runtimes differ in whether `once` consults callback `.call` or `.apply`.
-The hook observes actual callback entry without imposing another runtime's
-property reads or argument-list representation. Application methods selected by
-native dispatch keep their original receiver and argument-list object; opaque
-methods produce a `custom-call` or `custom-apply` observation gap when callback
-execution cannot be established.
-
-If native wrapper creation or registration-method lookup could expose private
-instrumentation through an application getter, setter or Proxy, registration
-stays native and unwrapped. The `once-metadata` observation gap identifies that
-unobserved registration attempt; it does not prove registration or delivery. The original callback,
-metadata writes and native method receivers are preserved, including when
-registration fails. Later registrations resume normal observation. Non-callable
-`call`/`apply` properties produce failed observation gaps when native dispatch reads
-them; callback entry is not fabricated.
-
-An `on` listener's application-defined `.apply` receives the original argument-list
-object unchanged. Borrowing the exposed method preserves its dynamic receiver.
-Because that method owns argument interpretation and may not
-invoke the callback, the hook records a bounded `ipc-observation-gap` timeline
-entry with the registered channel rather than an IPC invocation. Its empty
-`argument_shapes` means unobserved arguments, not a zero-argument callback;
-callback execution and result remain unknown. Coverage and retention include
-these gaps even when their individual records are dropped. Normal native
-dispatch continues to record actual invocation frames. Evidence snapshots copy
-retained arrays and counters without invoking application iterators or Array
-species.
-
-Listener-chain recognition distinguishes owned, unowned and unknown metadata.
-Data links may be inherited; absence is established only after completing the
-bounded prototype lookup. Exhausting either walk, encountering a getter or seeing a Proxy leaves
-ownership unknown. The hook preserves native registration without adding another
-recording wrapper and retains a `listener-chain` observation gap after successful
-registration. This gap does not prove IPC delivery. An existing inner recording
-wrapper can still report its actual invocation; otherwise callback activity
-remains unobserved. Setter-only properties have a known undefined read.
-Data-descriptor parsing is shared with removal normalization.
-
-This does not establish complete JavaScript function introspection equivalence.
-Caller-defined `.listener` properties can change the identity exposed by
-`listeners()` and meta-events; accessors and Proxy metadata are not followed for
-wrapper recognition. Re-registering a raw recording wrapper on another channel
-retains the original registration's channel attribution.
-Mutating `.listener` on a raw recording wrapper can also prevent removal through
-application decorators; the reproduced identity conflict is tracked in
-[#4513](https://github.com/morluto/rea/issues/4513).
-
-### Target fuse prerequisites
-
-Active scenario capture requires that the target Electron executable honors Node CLI inspector flags (`--inspect` or `--remote-debugging-port`) so that Playwright can establish its DevTools protocol session.
-
-When an Electron executable explicitly disables the `EnableNodeCliInspectArguments` fuse (or removes the capability), `capture-electron-scenario` fails immediately before process launch with an `AnalysisUnsupportedTargetError` ("unsupported_target") rather than waiting for the startup deadline. For targets with disabled inspector fuses, use passive CDP inspection via `inspect_electron_page` or run against an unrestricted development binary with the extracted `app.asar`.
-
 The real verifier exercises compiled CLI and stdio MCP discovery, page/script
 inspection, static/runtime reconciliation, active observation, and CLI SIGTERM
 cleanup before checking the IPC, renderer crash/reload, utility/child-process,

docs/firmware-analysis.md

@@ -153,9 +153,7 @@ tree semantics, vulnerability scanning, emulation or hardware runtime capture.
 ## Resource and lifecycle policy
 
 - Nonempty regular firmware inputs: at most **128 MiB**, copied and hashed into
-  a private workspace before analysis. Growth beyond that allowance during
-  copying receives the same typed input refusal as an already oversized file.
-  Supply a stable copy within the allowance. No in-place source modification.
+  a private workspace before analysis. No in-place source modification.
 - One queued heavy operation per provider instance; Binwalk one thread and
   Unblob one worker. No automatic parallel extraction engines.
 - **120-second** deadline; inherited **1 GiB per-process address-space** limit,

docs/ghidra-nativeaot.md

@@ -69,12 +69,6 @@ Pass a returned MethodTable address to `inspect_native_data_type`. A direct PE
 query also derives the snapshot metadata from the authenticated Ghidra session
 handshake, so it does not require a preceding load-image call. In a persistent
 MCP session, load-image followed by type inspection reuses that same derivation.
-The bridge resolves the caller's address spelling once; metadata lookup uses
-its canonical default-space identity. Bare hexadecimal, prefixed hexadecimal,
-and encoded default-space selectors therefore select the same MethodTable.
-Other address spaces and unresolved identities are not matched by offset alone.
-Metadata already supplied by the engine is retained without reading or deriving
-an additional source snapshot.
 The database result remains `unavailable` when Ghidra has no DataType at that
 address; its `metadata_recovery.source` is `read-only-derived-overlay` and
 carries related type, interface, slot, and target observations. Generated

docs/ghidra-provider.md

@@ -139,19 +139,6 @@ overview merely because its source artifact is unchanged.
 
 ## Admitted function-analysis semantics
 
-Concurrent callers share one startup while retaining independent cancellation.
-Only the final departing caller abandons startup and waits for its cleanup.
-New attempts wait for that cleanup; failed cleanup retains its original error
-and owned directories until a successful close. Closing the provider reports a
-provider-state failure to live callers rather than cancelling their signals.
-
-Configured analysis extensions and seeds use owned file reads during profile
-resolution and launch snapshots. A changed read extent or descriptor state
-refuses the commitment. Failed source or snapshot descriptor closes remain
-owned and block new admission until cleanup succeeds; the physical failure
-and exact cancellation reason remain available. Provider shutdown joins all
-profile stages before retrying their retained descriptors.
-
 | Concern                 | Ghidra contract                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            |
 | ----------------------- | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
 | Decompiler lifetime     | One persistent `DecompInterface` is opened for the imported Program and disposed during bridge shutdown. Native decompilation has no fixed per-function deadline. External functions or functions without bodies return `null`; cancellation and native failure remain distinct.                                                                                                                                                                                                                                                                                                                                           |
@@ -166,8 +153,8 @@ profile stages before retrying their retained descriptors.
 
 Function extents and instruction completeness refer to Ghidra's analyzed body.
 An inferred no-return call can terminate that body before subsequent bytes.
-Pseudocode, assembly, procedure info, instruction windows, incoming and outgoing
-references, callee and caller reads, and dossiers report observed terminal call sites in Evidence limitations,
+Pseudocode, assembly, procedure info, instruction windows, callee and caller
+reads, and dossiers report observed terminal call sites in Evidence limitations,
 including resolved callee names, addresses, and FunctionManager flags when
 available. On x86-32, the same views also report the exact Borland/Delphi-style
 FS exception-registration pattern when its handler address falls outside the
@@ -206,11 +193,7 @@ these tools before compilation. Keeping this matrix separate lets Linux
 host/provider acceptance run with only the host compiler.
 
 `npm run verify:ghidra:windows` checks source-owned native x86-64 PE applications;
-`-- --x86`, `-- --arm`, or `-- --arm64` selects another target architecture;
-`-- --dll` selects DLLs. Choose one architecture and optionally combine it with
-`--dll`. These static fixtures contain source-owned encoded instructions; they
-are not compiler-produced programs. See the [Windows verification scope](windows-ghidra-p0.md#native-authority-and-target-identity)
-for real-provider coverage and exclusions.
+`-- --x86` selects x86 and `-- --dll` selects DLLs, and the flags can be combined.
 These lanes check all 26 read-only operations, target/snapshot/import SHA-256 linkage,
 and project, endpoint, process, and runtime cleanup. The independent native
 lane checks DACLs, handle admission, cancellation, and Job Object lifecycle.

docs/go-binaries.md

@@ -39,8 +39,8 @@ container format, architecture, word size and byte order. A recognized
 - `module.dependencies`, with the same fields and their original order;
 - `module.settings`, retaining ordered key/value entries and duplicate keys;
 - `module.unparsed_lines`, `module.unparsed_line_bytes_base64` and
-  `module.complete`, which says whether every present module-text line was
-  parsed. It does not establish that the dependency inventory is complete.
+  `module.complete`, so unfamiliar, malformed, conflicting or undecodable records
+  do not disappear behind a complete result.
 
 Missing checksums are `null`; empty fields and development/local replacement
 versions remain unchanged. Build settings such as `GOOS`, `GOARCH` or `vcs.revision`
@@ -50,13 +50,6 @@ base64 while other decodable module records are still reported; the reader does
 not insert replacement characters or reject the entire artifact for those
 strings.
 
-When no main-module (`mod`) record was decoded, `module.main` is `null` and
-dependency coverage is unknown. Successfully decoded dependency records remain
-visible. GOPATH-mode builds may contain only a package `path` and build settings;
-their empty dependency array does not establish the absence of dependencies.
-The result's limitations state this explicitly. A module-mode build with a main
-module record and no dependency records has an observed empty dependency list.
-
 ## Supported boundary
 
 The built-in TypeScript reader supports ELF, PE and thin Mach-O images with Go's
@@ -91,10 +84,6 @@ host permission denial, changed artifacts and cancellation retain distinct
 errors. The selected file is never modified; this inspection creates no
 temporary files, starts no subprocesses and accesses no network endpoint.
 
-An input above 256 MiB returns `resource_constraint` with resource `file-size`
-and `reported_limits.maximum_input_bytes`. Select a suitable input within that
-fixed allowance; changing an output-write or transport budget does not admit it.
-
 Resource guards bound the selected file and cumulative header searches to 256 MiB
 each, aggregate embedded strings
 to 1 MiB, structural table decoding to 16 MiB and the complete normalized metadata

docs/ida-provider.md

@@ -8,8 +8,6 @@ Choose one lifecycle mode in an upstream MCP JSON registration. Set `REA_IDA_MCP
 
 Each mode accepts one upstream tool profile, checked against `tools/list` before any analysis runs. The attached profile requires the legacy GUI tool names; upstream 2.0.0 renamed those tools, and REA has not established an equivalent attached-mode lifecycle and ownership contract for that catalog. It therefore fails closed with the missing tool names in the error diagnostics.
 
-Startup failures identify the accepted REA analysis operation. Missing-profile and typed startup transport failures retain the original stage in `details.diagnostics.startup_operation`; existing diagnostics, timeout budgets and resource limits remain available. Startup remains shared within a session; each caller receives its own operation attribution. Cancellation retains live cleanup ownership, so a successful retry releases the originating cancellation outcome as well.
-
 The headless profile is defined by the database-supervisor API, not by an upstream version string. The upstream source snapshot [`c133c385`](https://github.com/mrexodia/ida-pro-mcp/tree/c133c3853faa111a9b00ee615c013b720d0c4acd) includes `idb_close` (introduced by [upstream PR #495](https://github.com/mrexodia/ida-pro-mcp/pull/495)) alongside `idb_open` and `idb_list`. Earlier builds may report the same `2.0.0` version while lacking that tool, so REA checks the live catalog rather than treating a version number or branch name as a compatibility guarantee.
 
 | Mode     | Upstream profile    | Known working                                          |
@@ -133,9 +131,9 @@ Use a package version that actually includes this adapter; repository main can b
 {"name":"close_binary","arguments":{}}
 ```
 
-Opening an MCP target starts its selected provider session; headless opening waits for auto-analysis. Set the agent's MCP request deadline long enough for the target. The registration's optional `timeoutMs` defaults to 300000 for upstream requests. An upstream SDK request that reaches this limit returns `provider_timeout` with its operation and actual request budget. A freshly opened headless worker can briefly report `status: "busy"` from `server_health`; REA re-reads health every 100 ms until the worker answers, the caller cancels, or `timeoutMs` has elapsed since the first read. Each health request is capped by the time remaining in that overall wait, so a stalled read cannot extend the readiness deadline by another full request timeout. Expiry while the worker is still busy produces a retryable `provider_timeout`; no further read is started after the deadline. That error names the busy tool from the last observation, or `unknown` when the worker reported none or a value that is not tool-name-shaped. If a health request itself consumes the remaining wait budget, the same last-busy timeout is returned with the stalled request's captured output. Cancellation during the wait produces `cancelled`. Any other unexpected health payload, including a busy payload with an invalid shape, remains `unreadable_output`. Cancellation drains the current upstream request before cleanup; it does not force-stop GUI analysis. An open request that times out without a completed response retains the private workspace because worker inventory alone cannot prove the request has stopped. `binary_session` reports actual tool availability. Repeated doctor/setup calls are unnecessary when the registration already works.
+Opening an MCP target starts its selected provider session; headless opening waits for auto-analysis. Set the agent's MCP request deadline long enough for the target. The registration's optional `timeoutMs` defaults to 300000 for upstream requests. A freshly opened headless worker can briefly report `status: "busy"` from `server_health`; REA re-reads the health every 100 ms until the worker answers, the caller cancels, or `timeoutMs` has elapsed since the first read. Only expiry while the worker is still busy produces a retryable `provider_timeout`; no further read is started once the deadline has passed. That error names the busy tool of the last observation, or `unknown` when the worker reported none or a value that is not tool-name-shaped. Cancellation during the wait produces `cancelled`. Any other unexpected health payload, including a busy payload with an invalid shape, remains `unreadable_output`. Cancellation drains the current upstream request before cleanup; it does not force-stop GUI analysis. An open request that times out without a completed response retains the private workspace because worker inventory alone cannot prove the request has stopped. `binary_session` reports actual tool availability. Repeated doctor/setup calls are unnecessary when the registration already works.
 
-For guided registration, set `REA_IDA_MCP_CONFIG` before `rea setup --client <client>`. Setup includes that file reference in its reviewed plan and preserves it after approval; it does not copy upstream credentials into the agent configuration. For `ida` or `auto` selection, Codex/Kimi setup and doctor use the effective client registration's parsed `timeoutMs` (default 300000 ms) when recommending the agent's per-tool deadline. Existing positive client deadlines remain caller choices. `rea doctor --provider ida --json` validates the registration without starting IDA and explicitly leaves runtime compatibility and target binding for analysis.
+For guided registration, set `REA_IDA_MCP_CONFIG` before `rea setup --client <client>`. Setup includes that file reference in its reviewed plan and preserves it after approval; it does not copy upstream credentials into the agent configuration. `rea doctor --provider ida --json` validates the registration without starting IDA and explicitly leaves runtime compatibility and target binding for analysis.
 
 ## Coverage and evidence
 

docs/index.md

@@ -50,7 +50,7 @@ For runtime instrumentation, see the [Frida guide](./frida-instrumentation.md).
 | Task                                                | Guides                                                                                                                                                                                                                                                                                                                      |
 | --------------------------------------------------- | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
 | Inspect native functions, references, or types      | [Native binaries](native-investigation.md), [Go metadata](go-binaries.md), [Rust dependencies](rust-binaries.md), [offline ELF layout](binary-diagnostics.md), [recorded crashes](recorded-crashes.md)                                                                                                                      |
-| Select a native provider or import format           | [Ghidra semantics](ghidra-provider.md), [Windows](windows-ghidra-p0.md), [DOS](ghidra-dos.md), [raw bytes](raw-binary.md), [MIPS](ghidra-mips.md), [PSP](ghidra-psp.md), [NativeAOT](ghidra-nativeaot.md), [IDA](ida-provider.md), [Kuna](kuna-provider.md), [JEB](jeb-analysis.md)                                         |
+| Select a native provider or import format           | [Ghidra semantics](ghidra-provider.md), [Windows](windows-ghidra-p0.md), [DOS](ghidra-dos.md), [raw bytes](raw-binary.md), [MIPS](ghidra-mips.md), [PSP](ghidra-psp.md), [NativeAOT](ghidra-nativeaot.md), [IDA](ida-provider.md), [JEB](jeb-analysis.md)                                                                   |
 | Analyze JavaScript or Electron artifacts            | [Static analysis](javascript-artifact-reconstruction.md), [tracing and comparisons](javascript-application-workflows.md), [application graph](javascript-application-graph.md), [source recovery](javascript-recovery.md)                                                                                                   |
 | Compare static JavaScript with runtime observations | [Runtime attribution](javascript-runtime-observation.md), [reconciliation](javascript-runtime-reconciliation.md), [Electron observation](electron-observation.md), [Electron fuses](electron-fuses.md)                                                                                                                      |
 | Inspect assemblies, packages, or firmware           | [.NET](managed-code-analysis.md), [Android](android-analysis.md), [Apktool resources](apktool-resource-analysis.md), [ADB acquisition](adb-device-analysis.md), [Apple](apple-application-analysis.md), [Harmony](harmony-analysis.md), [firmware](firmware-analysis.md), [WASM](wasm-artifacts.md), [EVM](evm-bytecode.md) |

docs/installation.md

@@ -3,13 +3,13 @@
 Run REA, connect your selected agents, and check the tools needed for your task.
 Setup previews configuration changes and asks for approval before applying them.
 
-| Task                              | Section                                                                                             |
-| --------------------------------- | --------------------------------------------------------------------------------------------------- |
-| Connect an agent                  | [Start setup](#start-setup), then [review changes](#review-setup-changes)                           |
-| Diagnose one task                 | [Scoped readiness checks](#check-readiness-for-your-task)                                           |
-| Configure an analysis engine      | [Hopper](#hopper), [Ghidra](#ghidra), the [IDA guide](ida-provider.md), or [Kuna](kuna-provider.md) |
-| Update or remove REA              | [Maintenance](#diagnose-update-and-remove)                                                          |
-| Resolve a client-specific problem | [Client configuration](client-configuration.md)                                                     |
+| Task                              | Section                                                                   |
+| --------------------------------- | ------------------------------------------------------------------------- |
+| Connect an agent                  | [Start setup](#start-setup), then [review changes](#review-setup-changes) |
+| Diagnose one task                 | [Scoped readiness checks](#check-readiness-for-your-task)                 |
+| Configure an analysis engine      | [Hopper](#hopper), [Ghidra](#ghidra), or the [IDA guide](ida-provider.md) |
+| Update or remove REA              | [Maintenance](#diagnose-update-and-remove)                                |
+| Resolve a client-specific problem | [Client configuration](client-configuration.md)                           |
 
 ## Start setup
 
@@ -59,12 +59,10 @@ Hopper installation or any file write. Declining or pressing Ctrl-C makes no
 changes. Agent configuration writes preserve unrelated entries and comments,
 create backups, use atomic replacement, and verify their result. Setup and
 uninstall retain an existing `.rea.backup` rather than replacing the first snapshot.
-If that snapshot differs from the current configuration, setup and uninstall
-preserve a verified `.rea.backup.<sha256>.recovery` copy of the current bytes
-before editing; setup also previews it. Both snapshots remain available.
-When an edit made a backup, a failed uninstall update or restore, and a failed
-setup readback or rollback, name the backup path that holds the bytes from just
-before that edit.
+If that snapshot differs from the current configuration, setup previews and
+preserves a verified `.rea.backup.<sha256>.recovery` copy of the current bytes.
+Both snapshots remain available; a failed rollback reports the current recovery
+copy's path and the restore failure.
 Setup also retains valid environment overrides in REA's existing server entry,
 such as `REA_MCP_INPUT_SCHEMA_PROFILE`, `REA_MCP_OUTPUT_SCHEMA_PROFILE`, and
 `REA_MCP_MAX_RESPONSE_BYTES`.
@@ -149,8 +147,7 @@ identity remains available at `identity.catalog`.
 
 Setup pins package-runner MCP registrations to the exact installed REA version,
 installs the matching skill and on-demand references in the same plan, and adds
-`startup_timeout_sec = 30` for Codex and Grok Build. Codex also receives a
-`tool_timeout_sec` derived from known provider startup plus operation headroom.
+`startup_timeout_sec = 30` for Codex and Grok Build.
 
 ## Limit REA to one project or agent profile
 
@@ -181,8 +178,6 @@ as well, so it is broader than this Claude-only migration.
 history under `CLAUDE_CONFIG_DIR`. Setup follows the same
 variable: it writes the registration to `$CLAUDE_CONFIG_DIR/.claude.json` and
 the skill to `$CLAUDE_CONFIG_DIR/skills`.
-For REA setup, an empty `CLAUDE_CONFIG_DIR` is treated as unset: registration
-goes to `~/.claude.json` and the skill goes to `~/.claude/skills`.
 
 ```bash
 CLAUDE_CONFIG_DIR=~/.claude-rea npx rea-agents setup --client claude_code
@@ -402,9 +397,8 @@ running server or its registration.
 The npm release checked on **2026-10-11** was **6.4.0**, published from
 [`a56f7bb6`](https://github.com/morluto/rea/commit/a56f7bb668ab23fec8d33f7af353ac7ed2fe1895).
 The actual registry package accepted dry-run setup plans for the 17 client IDs
-in that release, including Qwen Code, Pi and Hermes. Seven client IDs are
-included from 6.5.0 and were absent from the checked npm 6.4.0 package: `droid`,
-`dsh`, `kimi`, `qoder`, `trae`, `workbuddy` and `zcode`.
+in that release, including Qwen Code, Pi and Hermes. DeepSeek Harness (`dsh`)
+is included from 6.5.0 and was absent from the checked npm 6.4.0 package.
 The 6.4.0 registry check does not establish 6.5.0 publication or live DeepSeek
 API integration.
 OpenCode's plan selected
@@ -487,8 +481,8 @@ hosted connector; see [its configuration](client-configuration.md#other-client-s
 | ZCode              | `zcode`          |
 | DeepSeek Harness   | `dsh`            |
 
-`droid`, `dsh`, `kimi`, `qoder`, `trae`, `workbuddy`, and `zcode` require
-`rea-agents@6.5.0` or later. The 6.4.0 registry check above does not cover them.
+`dsh`, `kimi`, and `workbuddy` require a release containing them. The registry
+check above does not cover them.
 
 See [client configuration and troubleshooting](client-configuration.md) for
 configuration paths, profiles, trust policies, and schema-limit workarounds.
@@ -546,37 +540,6 @@ search permissions (`0700`) on a directory you own before retrying.
 
 On supported Linux distributions, approved setup verifies Hopper's official
 `.deb`, `.rpm`, or Arch package before invoking the native package manager.
-The official release feed selects the current public demo without a version
-pin. REA verifies the package's detached PGP signature against Hopper's stable
-primary fingerprint `7C2D73BAFAF5B9A710A69DA1A26DF815099B1BCD`, then checks
-that the signed package and installed launcher agree with `main_exe_hash`.
-Rotating signing subkeys remain bound to that primary identity.
-The feed row itself is not PGP-signed; doctor labels its display version as
-`reported_release_version`, separately from the authenticated launcher identity.
-
-The approval plan includes the caller-selected cache location. Approved setup
-retains the signed archive, public key and release metadata under
-`${XDG_CACHE_HOME:-$HOME/.cache}/rea/hopper-releases/<launcher-sha256>`.
-An empty `XDG_CACHE_HOME` uses `$HOME/.cache`. Approved setup can repair a
-damaged caller-owned entry after authenticating a fresh package; the previous
-entry is preserved beside it as `<launcher-sha256>.backup-<id>`. Ordinary doctor
-and launches reject damaged evidence and never repair it implicitly.
-Approved publications of the same canonical cache entry share a process-backed
-lease. Concurrent setup waits without moving another writer's evidence; a
-failed replacement restores the previous directory when possible and reports
-any retained backup path. Unavailable reads or native inspection tools do not
-authorize replacing existing evidence.
-Doctor and launches authenticate this evidence for offline use; an editable
-digest receipt alone cannot authorize a launcher. Verification reuses at most
-eight immutable package proofs per process, keyed by the complete package,
-key, signature, package format and expected launcher digest. Cached file reads
-still check identity and content. Without retained evidence, inspecting an
-existing install requires the matching current official package and network
-access. Successful live inspection can be reused within that process after
-rehashing the launcher; it does not write a persistent cache or claim that a
-previously observed release is still the latest. Older uncached builds require
-an approved update while the feed exposes only its current release.
-
 REA runs the supported demo build on a private Xvfb display and selects Hopper's
 offered demo mode for each analysis session; it does not require the user's
 desktop display. Unattended package-manager access requires
@@ -639,11 +602,6 @@ bridge readiness. For large targets, set `REA_HOPPER_STARTUP_TIMEOUT_MS` to a
 decimal integer from 1 to 2,147,483,647 milliseconds in the environment that
 starts REA. CLI and MCP use the same setting; invalid values fail configuration
 validation. An MCP client's own request timeout must also allow enough time.
-`open_binary` validates and selects a target without waiting for native provider
-readiness. During Hopper startup, `binary_session.provider_operation_health`
-reports `busy` at stage `launch`; `analysis_activity` describes bridge requests
-and can remain idle until the socket is ready. Cleanup work reports `busy` at
-stage `connection`.
 
 If macOS denies Apple Events, allow the application that starts REA under
 **System Settings → Privacy & Security → Automation**, then retry. REA releases
@@ -653,12 +611,9 @@ Arguments containing quotes, backslashes, or line breaks remain unchanged but
 cannot establish that a failed handoff opened no document. Other failed handoffs
 retain ownership until document closure is confirmed. If a timed-out bridge
 becomes ready later, `close_binary` connects to that run, authenticates its
-identity, and requests document shutdown. Once its listener is ready, the bridge
-allows 30 seconds for the first connection and capability validation. After a
-connection drops, it allows the same grace period for an authenticated cleanup
-reconnect, then releases Hopper's Python execution thread. Initial analysis is
-outside this listener grace period, and authenticated native work is not bounded
-by it. Expiry does not establish document closure, so REA
+identity, and requests document shutdown. After a connection drops, the bridge
+allows 30 seconds for an authenticated cleanup reconnect, then releases Hopper's
+Python execution thread. Expiry does not establish document closure, so REA
 retains unconfirmed ownership. Retry close while the bridge remains available.
 
 If a Linux launcher exists but cannot start, inspect its shared libraries:
@@ -679,20 +634,6 @@ If startup reports `Cannot launch Hopper! Connection is invalid.` or waits for
 bridge readiness, check Hopper for a pending demo, license, or loader dialog.
 Complete the dialog and retry. If REA reports `cleanup_incomplete`, follow the
 retained-resource guidance below before reopening the target.
-
-On macOS, Hopper can show an `Executing Python Script...` overlay while the REA
-bridge serves an active MCP connection. Long-lived MCP clients can keep that
-connection open across agent turns, so the overlay may remain visible after the
-analysis calls finish; by itself, it does not establish a stalled startup. REA
-does not automatically idle-close a still-connected target. When the
-investigation is finished, export an Evidence bundle first if you need to keep
-the session ledger, then call `close_binary`; set `snapshot_path` to save a
-provider-neutral analysis snapshot as part of closing. A successful close
-shuts down the REA bridge and clears its overlay; REA does not control the
-macOS Hopper application lifetime.
-The Hopper GUI Cancel button's behavior for this bridge has not been verified;
-`close_binary` is the supported cleanup path.
-
 Hopper serializes analysis requests. Cancelling a wait can leave provider work
 running, which the session reports. Successful decompilation is cached until
 a relevant rename or comment changes it.
@@ -748,17 +689,9 @@ Once document and process closure are confirmed, the lease can be released even
 if temporary-file cleanup fails. Another client can then launch, but the owning
 client must finish its retained cleanup before starting again.
 An unconfirmed external document can be retried while its authenticated bridge
-remains available. The same authentication and process-identity capture apply
-when the first successful handshake occurs during cleanup after a startup
-timeout. REA can confirm closure if that exact authenticated process exits,
-including while a shutdown request is in flight. A helper exit alone is
-insufficient, and an application that never authenticated has no verified
-process identity. If no matching bridge becomes available, inspect and close
-the reported document in Hopper before ending the owning REA connection.
-Export the Evidence bundle before `close_binary` clears session records.
-`binary_session.cleanup_pending` remains true while provider cleanup is retained,
-and provider health remains visible even with `open: false`; that flag alone
-does not establish successful cleanup.
+remains connected. If that bridge has disconnected, another close cannot confirm
+the document: inspect and close the reported document in Hopper before ending
+the owning REA connection.
 
 ### Hopper in CI
 
@@ -817,7 +750,7 @@ and `set_addresses_names` name a function entry or any other mapped address
 session metadata edits leave executable bytes unchanged and are discarded on close. GUI controls
 require Hopper; Windows P0 remains read-only.
 
-Windows P0 admits native x86, x86-64, ARMNT (Thumb-2) and ARM64 PE applications and DLLs, plus explicitly
+Windows P0 admits native x86 and x86-64 PE applications and DLLs, plus explicitly
 selected [raw NMOS 6502 images](raw-binary.md#nmos-6502) with a caller-supplied
 entry at file offset 0, on fixed local NTFS volumes. Other raw CPU families remain
 unsupported on Windows.
@@ -835,16 +768,6 @@ rea doctor --json
 rea setup
 ```
 
-On macOS, [Homebrew OpenJDK is keg-only](https://formulae.brew.sh/formula/openjdk)
-and may be unavailable to the system `java` wrapper. Set `JAVA_HOME` to the
-selected formula's `libexec/openjdk.jdk/Contents/Home`, for example
-`/opt/homebrew/opt/openjdk/libexec/openjdk.jdk/Contents/Home` or
-`/usr/local/opt/openjdk/libexec/openjdk.jdk/Contents/Home`. Use a JDK inside the
-Java version bounds declared by your Ghidra installation; REA does not select
-another installed JDK automatically. Doctor distinguishes an absent Java
-command from a command that runs and fails, and retains bounded probe output
-and any parsed properties when the selected runtime cannot be admitted.
-
 On Windows, configure the existing installation in PowerShell:
 
 ```powershell
@@ -882,28 +805,6 @@ MCP clients do not depend on an incidental shell path. Setup shows every exact
 environment entry in its plan, writes only after approval, and never downloads,
 installs, upgrades, or modifies Ghidra or Java.
 
-Installation inspection derives the private configuration directory identity from
-`application.version` and `application.release.name` in
-`Ghidra/application.properties`. The directory's version spelling follows Ghidra
-(for example, `12.1.0` becomes
-`12.1`), while the reported provider version preserves the original value.
-The launcher uses that inspected coordinate; it does not reread the properties
-or guess from the extracted folder's name.
-If the identity is missing, malformed, or unsafe as a single path component,
-the launcher fails before preparing its home/cache/config/temp directories or
-starting Java. The client may already have allocated private runtime/endpoint
-resources and a target snapshot; existing startup-failure cleanup still applies.
-Restore the selected release's properties instead of renaming its installation folder.
-Inspection follows selected properties symlinks, admits only a regular file,
-and caps the metadata payload at 1 MiB under REA's resource budget. A final
-one-byte probe checks for growth. This is not a Java
-Properties format limit. Reads preserve Ghidra's Latin-1 byte mapping and check
-the descriptor and selected name for changes. Permission failures and resource
-refusals remain explicit; failed descriptor cleanup must succeed before that
-owner admits another inspection.
-This coordinate selects only REA's session-private configuration directory, not
-the installation or an existing user configuration directory.
-
 Each verified session uses an ephemeral temporary project and isolated
 home/cache/config/temp paths. REA passes `-readOnly`, `-deleteProject`, uses
 Ghidra's default analysis settings, and loads its packaged Java
@@ -930,9 +831,6 @@ bridge, and health readiness. Large binaries can need more: set
 `REA_GHIDRA_STARTUP_TIMEOUT_MS` to an integer between 1 and 2,147,483,647
 milliseconds in the server environment. An absent setting uses the default;
 empty, invalid or out-of-range supplied values fail configuration validation.
-When the deadline elapses, the `provider_timeout` error names
-`REA_GHIDRA_STARTUP_TIMEOUT_MS` with the deadline that was applied and suggests
-`REA_GHIDRA_DISABLED_ANALYZERS` for analyzers that dominate the time.
 REA parses the supplied configuration environment and
 passes the deadline to each provider client; a startup failure is returned by the query that triggered it,
 without exposing partial analysis. This deadline is separate from MCP transport

docs/javascript-application-graph.md

@@ -68,17 +68,6 @@ The node vocabulary covers:
 - runtime script instance;
 - an explicit `unknown` kind when classification is not justified.
 
-Static network endpoints can have `resolution: "partial"` when the analyzer
-recognizes a request call but cannot resolve its target to one exact value.
-The observation's `value` then preserves the source expression, and its
-evidence points to the call site. Partial and exact endpoints have distinct
-identities even when their displayed values match. Partial identities also retain
-the source site: matching expression text at different sites does not establish
-the same runtime target. This records observed source syntax; it does not
-establish that the call ran or contacted that endpoint.
-Graph coverage describes the analyzed artifact scope and resource limits, not
-runtime execution. A partial target alone does not imply omitted source.
-
 The directed relation vocabulary is `contains`, `loads`, `imports`, `maps_to`,
 `exposes`, `sends`, `invokes`, `handles`, `calls`, `persists_to`, `observed_as`,
 and `changed_from`. Provider names are deliberately absent from both

docs/javascript-application-workflows.md

@@ -6,7 +6,7 @@ are `inspect_analysis_view`, `trace_application_feature`,
 `trace_javascript_semantics`, `compare_application_versions`,
 `compare_source_to_bundle`, and `compare_javascript_export_shapes`; their CLI
 equivalents use the same names with hyphens. `inspect_analysis_view` projects a
-summary, module page, typed module references, or one module from already completed application
+summary, module page, or one module from already completed application
 Evidence; it does not walk relationships.
 
 `inspect_analysis_view` also projects retained `inspect_binary_layout`
@@ -40,105 +40,6 @@ combine its fields with the fact's location. Semantic trace results include the
 canonical context subset referenced by their returned facts, so those facts
 remain self-contained in the response.
 
-## Retained module facts
-
-For canonical identities and retained source-range counts, query the existing
-`inspect_analysis_view` tool with a typed module-reference projection:
-
-```json
-{
-  "source": {
-    "kind": "retained-evidence",
-    "evidence_id": "ev_ACTUAL_PARENT_ID"
-  },
-  "view": {
-    "kind": "javascript",
-    "collection": "modules",
-    "projection": "references",
-    "where": { "path": "main.js", "kind": "javascript-module" },
-    "offset": 0,
-    "limit": 16
-  }
-}
-```
-
-Replace the parent ID with the actual analysis summary's `parent_evidence_id`.
-Filters match exact retained paths and kinds. Omission includes all values;
-`path: null` selects an unavailable path and `path: ""` selects a recorded empty
-path. Multiple identities can share a path. The default offset is 0 and limit
-is 64; follow `coverage.next_offset` for later matching rows in retained order.
-
-Each row contains its `node_id`, kind, path, canonical identity, retained
-source-range observation count, and distinct supporting authority/state/confidence
-combinations in `basis`. These counts do not prove unique reference sites or
-runtime loading. Use the existing module item view with the row's `node_id` for
-exact source ranges and complete observations. The result retains parent/query
-Evidence identity, artifact identity, limitations and unknowns. `source_coverage`
-keeps selected/unselected sources, graph coverage and unknown counts separate
-from page exhaustion; an exhausted or empty page cannot prove absence from an
-incompletely analyzed application. CLI `inspect-analysis-view` reads the same
-request from a JSON file; portable input uses `source.kind: "inline"` with the
-complete parent Evidence.
-
-## Retained file and native facts
-
-Read metadata, native inventory and unavailable processing scopes directly from
-retained application observations:
-
-```json
-{
-  "source": {
-    "kind": "retained-evidence",
-    "evidence_id": "ev_ACTUAL_PARENT_ID"
-  },
-  "view": {
-    "kind": "javascript-facts",
-    "where": { "paths": ["package.json", "build/Release/addon.node"] },
-    "property_keys": [
-      "name",
-      "version",
-      "bytes",
-      "availability",
-      "operation",
-      "analysis_status"
-    ],
-    "offset": 0,
-    "limit": 32
-  }
-}
-```
-
-Each row preserves its node identity, observation ID, source-map reference and
-original Evidence, including location, authority, confidence, coverage and
-limitations. `property_keys` selects exact retained property names; absent keys
-stay omitted and retained null values stay null. An empty list requests only
-identity/provenance. Observations are not merged into a single asserted fact.
-When property names are unknown, opt into
-`include_available_property_keys: true`. Each returned row then lists its
-original `available_property_keys`, without unselected values; combine this with
-`property_keys: []` for discovery only. The default is false, so known-field
-reads do not pay for field inventories. Keep node/observation IDs paired when
-combining rows; location-related observations need not belong to the same node.
-
-`where.paths` compares exact Evidence `artifact-path` values or `source-range`
-sources. Empty query strings remain valid selectors, though current location
-contracts require nonempty paths/sources. It does not inspect display labels or a
-property named `path`, normalize URLs, or reopen files. Omission includes unknown
-locations; an empty list matches none. Optional `where.kinds` filters original
-node kinds, with an empty list likewise matching none. Multiple locations of
-shared content remain separate rows with the same canonical node identity.
-
-These rows select application-graph observations. Semantic relationships and
-semantic unknown records remain in complete parent Evidence and trace tools.
-
-Rows follow retained node/observation order. The default offset/limit is 0/64;
-follow `coverage.next_offset`. Page totals count matching retained observations,
-while `source_coverage` preserves caller selection and application/semantic
-partial or unknown states. An empty or exhausted page does not establish absence
-outside examined coverage. Complete source Evidence remains available through
-export. CLI `inspect-analysis-view` and portable Evidence use the same contract
-and application implementation as MCP.
-
 ## Feature tracing
 
 Select one literal seed kind: node ID, route, string, API, IPC channel, module,
@@ -154,14 +55,6 @@ matches exactly. Otherwise the result recommends provider-neutral follow-up
 tools and reports `requires-provider-analysis`; it never starts or switches a
 provider implicitly.
 
-A handoff requires the add-on's exact content identity. Unavailable unpacked
-companions remain visible in the trace graph with their canonical path,
-availability and container-backed Evidence. They yield no actionable handoff
-until their bytes are available and the application is reanalyzed; the archive
-digest does not identify the missing add-on. An empty handoff list does not prove
-that the trace contains no native components. Source partial coverage remains
-visible independently of handoff eligibility.
-
 ## Semantic relation tracing
 
 `trace_javascript_semantics` queries the authenticated companion graph without
@@ -184,17 +77,6 @@ registrations/removals and dispatch, Node timers and cancellation handles, async
 defaults, request construction and response consumers, parse/coercion/
 validation boundaries, and built-in resource acquisition/release.
 
-Local callback candidates do not establish a complete target set when a
-conditional write may leave a parameter, catch binding, or uninitialized
-variable unchanged. These calls retain candidate edges and dynamic uncertainty;
-default traces remain ambiguous with partial coverage. Opt into
-`include_ambiguous_dynamic_edges` to traverse the candidates. Proven preceding
-unconditional assignments, including writes dominating a read in the same
-conditional block, can resolve a target; later writes do not replace an
-earlier read or captured alias. Unproved ordering across branches or function
-activations remains conservative. Returned-reference effects use the same
-read-position facts as call resolution.
-
 Mutation tracking covers explicit member assignments, updates, deletion, and
 loop assignment targets, including the supported local aliases and shared
 nested references. Calls conservatively invalidate exposed mutable references;
@@ -244,13 +126,8 @@ graph and read literal values from `properties.value`, rather than decoding
 role keys or labels. Previously stored graphs and their original IDs remain
 valid inputs.
 
-Endpoint observations keep their value in `properties.value`. When
-`properties.resolution` is `partial`, that value is the unresolved source
-expression, with an identity distinct from an exact endpoint of the same text.
-Semantic request and response nodes keep their endpoint in `properties.endpoint`. Endpoint
-lookup identities are preserved independently of the primitive-value lattice's
-byte budget. An oversized normalized literal can become unknown while the same
-string remains an exact endpoint for tracing and comparison. Endpoint
+Endpoint nodes keep the exact endpoint in each observation's `properties.value`;
+semantic request and response nodes keep it in `properties.endpoint`. Endpoint
 identity keys use `value-sha256:<digest>` over the canonical JSON string when
 that is shorter, or when the original value starts with the reserved digest
 prefix. Other short endpoint keys remain unchanged. Endpoint labels use the
@@ -331,13 +208,6 @@ Direct return expressions, including expression-bodied arrows, are evaluated
 through an execution-free value lattice. Literal object fields and direct
 return sites are represented in the result. Calls, dynamic spreads, computed
 keys, and parser recovery remain partial or unknown.
-Rebound values are evaluated at their read position: saving an incoming parameter
-before a later assignment preserves caller-dependent uncertainty, while a proven
-preceding assignment can supply a constant. Unresolved ordering remains unknown.
-Supported reads within object and array literals follow left-to-right evaluation;
-an unproved relative order remains unknown. A later write in a separate conditional
-block can still leave an earlier capture unknown because ordering across those
-blocks is not proven.
 Objects and arrays passed to calls, constructors, or tagged templates, used
 as method receivers, or stored through property targets are not assumed
 unchanged afterward. Property stores conservatively retain reference escape

docs/javascript-artifact-reconstruction.md

@@ -182,18 +182,6 @@ partial Evidence. Cancellation after source analysis begins can also retain
 completed facts, including when interrupted during cleanup, graph construction,
 or Evidence sealing. Unexamined relationships remain unknown.
 
-Per-file gaps identify the applicable processing phase: JavaScript source analysis
-uses AST authority, while package/JSON, HTML-reference and source-map processing
-use artifact-byte authority. File-analysis interruption gaps carry `analysis_status`:
-`interrupted` means the phase was entered (including source-worker startup),
-and `not-started` means interruption prevented that phase from beginning.
-Neither state establishes that parsing completed. Remaining parsers are not run
-after interruption just to populate a result.
-
-Native add-ons remain metadata-only and acquire no JavaScript parse or analysis
-gap. This also applies when their paths are outside `source_paths`; their inventory
-and caller selection remain available without implying applicable AST work.
-
 MCP returns a `partial_observation` retained reference after recording succeeds;
 open it with `inspect_analysis_view` on the same connection. If the SDK stopped
 waiting before receiving the reply, follow [MCP cancellation recovery](mcp-contracts.md#progress-and-cancellation)
@@ -218,9 +206,6 @@ code unit, matching the original bytes identified by the artifact digest.
 
 Plain `.ts` artifact sources use TypeScript syntax without JSX, including
 angle-bracket type assertions. `.tsx` and `.jsx` retain JSX parsing.
-JavaScript sources use JavaScript grammar with JSX, never TypeScript syntax,
-so valid JavaScript that TypeScript reads differently keeps its JavaScript
-meaning.
 
 Relative TypeScript imports can name their emitted `.js`, `.mjs`, or `.cjs`
 counterparts while resolving to inventoried source files. This substitution
@@ -235,10 +220,7 @@ Selected bounded text is then parsed as inert data to recover:
 - Webpack and Rspack chunk registrations and module factories represented as
   AST literals;
 - static imports, dynamic imports, CommonJS `require` calls, workers, and
-  service workers (only `new Worker(new URL(path, import.meta.url))` resolves
-  relative to the calling module; string worker and service-worker paths use
-  the document base URL or Node's working directory, which static analysis
-  does not establish, so they keep their expression and stay unresolved);
+  service workers;
 - route, network endpoint, storage, and vendor-marker observations;
 - local source-map declarations and original
   source names and content digests;
@@ -288,13 +270,8 @@ RPC client syntax also contributes network endpoint candidates, in both
   named operation found at the start of a string or cooked template literal —
   the name must be followed by variable definitions (`($`), a directive, or a
   selection set starting with a field name — or in a precompiled
-  `OperationDefinition` document object. A standalone Source object's `body`
-  remains an operation candidate even when it has `locationOffset` metadata.
-  A graphql-tag `loc.source.body` copy is suppressed only when that source
-  belongs to a recovered document with the same operation and its containing
-  document, location and source have proven private metadata ownership. Writes,
-  escapes and classic-script global bindings retain the source observation.
-  Anonymous operations are not reported.
+  `OperationDefinition` document object. A graphql-tag `loc.source.body` copy is
+  not reported twice. Anonymous operations are not reported.
 
 Literal link options and precompiled document fields follow object property
 order: the final definition owns the key. A later spread, dynamic computed key,
@@ -311,25 +288,13 @@ suffix. Utility calls such as `useUtils().invoice.list.fetch()`, `useQueries`,
 and links whose callee was renamed by a minifier are not recognized.
 
 Each recovered bundle module retains the exact factory-source digest. A complete
-bounded AST also receives a `babel-ast-v3` structural fingerprint. It ignores
-ordinary identifier spellings while retaining literal and directive values,
-operators, fixed property names, and selected syntax flags such as computed
-keys, declaration kind, function async/generator state, update-expression
-prefix, method kind, and class static state. Local names used in computed keys
-remain rename-resistant; private member names are also ignored while their
-method kind and static state remain represented.
-
-This fingerprint is structural evidence for candidate matching, not proof that
-two modules behave equivalently. Its scope follows the AST facts listed above;
-unrepresented syntax can still collide. The exact source digest remains
-available to show byte-level change, and comparison reports content changes even
-when structural matching succeeds.
-
-Version comparison includes the algorithm in its structural matching key.
-Retained `babel-ast-v1` results can still match other v1 results, and v2 results
-can still match v2 results, but v1/v2 results cannot structurally match v3
-results. Other matching tiers remain available across algorithm versions.
-Re-analyze both snapshots to compare using the v3 rules.
+bounded AST also receives a `babel-ast-v2` structural fingerprint that ignores
+ordinary identifier names while retaining syntax, literals, operators, object
+keys, and member properties. Computed member identifiers retain their access
+syntax without treating a local variable's spelling as a fixed property; template
+literal contents remain part of the fingerprint. Version comparison keeps the
+algorithm in its matching key, so retained `babel-ast-v1` fingerprints cannot match
+these new fingerprints. Re-analyze both snapshots to compare their new structure.
 If fingerprint construction reaches its structural
 bound, the fingerprint is unavailable and its status is `truncated`; a bounded
 prefix is never presented as a complete stable fingerprint.
@@ -350,17 +315,6 @@ substitute version-dependent Electron defaults for omitted `webPreferences`.
 Unresolved option objects, bridge keys, API objects, and IPC channel expressions
 remain unknown and make coverage partial.
 
-BrowserWindow options and `webPreferences` can follow local `const` aliases
-whose initialization precedes the use. The shared lexical and mutation index
-checks the selected `webPreferences` path, so an unrelated `options.icon` write
-does not discard these facts. Reassignment, relevant writes, prior escapes,
-ambiguous initialization, and unresolved spreads remain unknown. The binding
-association is an inference: the window observation retains the constructor
-location and `resolution_sources` identifies the original object literals in
-the same artifact. Inline option syntax keeps its observed Evidence. This
-does not execute code or establish runtime configuration; popup overrides from
-`setWindowOpenHandler` are not covered by this constant-options resolution.
-
 Recognized literal module-table bootstraps also support bounded lexical
 substitution through module exports, import helper bodies, local wrapper calls,
 returned closures, object spreads, and callback parameters. Recovered Electron
@@ -374,29 +328,6 @@ conditions retain both return branches, including fallthrough. Short-circuit
 selection distinguishes truthiness from nullishness; uncertain `??` paths
 retain a nullish guard rather than a falsy guard.
 
-Recognized module factories retain a separate initialization boundary for each
-reachable return and for fallthrough. A conditional early return does not hide
-later exports on the continuing path; exports and captured initializers after a
-definite exit remain unavailable. Fallthrough candidates retain their branch
-predicates. Exports shared by the complete set of proven exits also retain
-unconditional facts. Their shared view excludes later overwrites and bounds
-captured initializers by the earliest completion; branch-dependent facts keep
-their predicates. Incomplete or additionally guarded exit sets cannot use that
-proof. Completed factory control flow is reused within that analysis only.
-Guarded main-process registrations remain candidate paths even with empty
-callbacks; they do not become unconditional IPC summary facts.
-Factory guards read export writes at their source position. Destructured and
-spread snapshots retain their capture position rather than reading later writes.
-An unproven namespace read boundary remains unknown.
-Completed factory environments preserve their `exports` and `module.exports`
-alias identity when a namespace escapes through an export or returned closure.
-Synchronous helper calls retain the caller's factory activation and read point;
-lexical captures and executing callers remain separate facts.
-Async calls retain their truthy Promise identity until an explicit `await`;
-generator calls produce iterators without evaluating their bodies. Iterator
-advancement and Promise/iterator members remain explicitly unresolved. Awaited
-function values retain their source origins and captured initialization bounds.
-
 These paths appear as contextual `javascript-expression` nodes. An exact `api`
 seed such as `desktop.copy` can trace an exposed member through a unique IPC
 pairing to an external API call. `addListener` is normalized to `on`. Semantic
@@ -460,13 +391,10 @@ For `.node` bindings, member names mean “requested by JavaScript syntax.” A
 resolved add-on path does not convert them into verified native exports. Native
 symbol verification remains a separate deep-analysis claim.
 
-Exact endpoint values preserve useful local diagnostics, including query values
-and fragments, while removing URL username/password credentials when the value
-parses as a URL. When a recognized request target cannot be resolved exactly,
-the endpoint's partial resolution retains the original source expression with
-its call-site provenance. This does not establish that the request executed.
-Artifact paths, digests, parse locations, and analysis metadata remain
-actionable because REA is local-only.
+Endpoint observations preserve useful local diagnostics, including query values
+and fragments, while removing only URL username/password credentials. Artifact
+paths, digests, parse locations, and analysis metadata remain actionable
+because REA is local-only.
 
 ## Safety boundary
 
@@ -498,18 +426,7 @@ retained candidate strings and temporary canonical-key serialization. This is
 an in-memory semantic allocation bound independent of CLI or MCP transport
 budgets. Source literal bytes remain in the parsed source and artifact evidence;
 when a normalized semantic value exceeds the bound, its value is unknown and
-coverage is partial. Direct string literals, cooked templates without
-substitutions, and derived strings all use this normalization boundary. A
-single exact primitive is validated without allocating deduplication or sort
-state or serializing a canonical key. Configuration defaults use the same
-normalizer; limited defaults retain `value_resource_limit` and an anchored
-resource-limit unknown. Known null, false, zero, and empty-string defaults stay
-exact. This primitive-value bound does not truncate lookup identities such as
-source paths, field names or request endpoints. Full endpoint properties remain
-available for endpoint queries, tracing and comparison. Each analysis records encountered limit classifications independently of
-later projections: a selected healthy sibling can remain exact while whole-file
-coverage reports the encountered bound. Projection preserves limiting values
-from the shared property-slot owner. Expression
+coverage is partial. Expression
 evaluation and provenance walks stop after 256 nested levels. Union products
 and string lengths are checked before allocating combinations or concatenated
 strings. When a boundary is reached, the value stays unknown, semantic coverage
@@ -709,10 +626,6 @@ href are read without surrounding whitespace or embedded tabs and newlines, and
 their percent-encoded path bytes are decoded; encoded dot and separator bytes
 are still rejected. CommonJS module lookups retain extension and directory
 resolution.
-ESM, HTML, and URL references apply URL dot segments to empty path segments:
-`./assets//../app.js` selects `assets/app.js`, while a remaining empty segment
-such as `./assets//app.js` stays unavailable. CommonJS keeps filesystem path
-semantics and selects `app.js` for the same text.
 Unresolved HTML references retain their declaration, source range, and resolution
 reason in the renderer observations.
 HTML script source ranges follow the HTML parser across LF, CRLF, and bare CR

docs/javascript-runtime-observation.md

@@ -95,11 +95,6 @@ pauses or resumes execution, calls `Runtime.runIfWaitingForDebugger`, launches
 the target, instruments JavaScript, or invokes Electron APIs. Closing a call
 closes only REA's WebSocket.
 
-Each WebSocket handshake and command response has its own 20-second deadline,
-separate from the caller-selected observation window. A stalled handshake or
-command reports `provider_timeout` and retains observations already received;
-caller cancellation still reports cancellation.
-
 The direct observations are:
 
 - `Debugger.scriptParsed`, establishing that a bounded script location was

docs/javascript-runtime-reconciliation.md

@@ -91,20 +91,17 @@ nodes. REA evaluates compatible static candidates conservatively:
 
 1. A captured-source SHA-256 plus one matching mapped location yields
    a content-and-location match.
-2. When no static candidate exists at a mapped location, one unique exact
-   content digest can match. Whole-asset digests and reconstructed module-factory source
+2. One unique exact content digest can match even when no location mapping is
+   available. Whole-asset digests and reconstructed module-factory source
    digests remain distinguishable in the reported basis.
 3. Without captured bytes, one unique mapped artifact path can produce a
    medium-confidence location match.
 4. Multiple candidates remain `ambiguous`; no `observed_as` edge is emitted.
-   With captured source and mapped candidates, only mapped content matches
-   qualify; unrelated content matches elsewhere are excluded.
    `candidate_static_count` reports the full qualified layer/node count, and
    `candidate_static_nodes` includes every unique candidate reference.
 5. If captured bytes disagree with the static candidate at the mapped path,
-   the result is an explicit mismatch. An equal digest elsewhere cannot hide
-   that disagreement. If a mapped candidate's digest is unavailable and no
-   mapped content match is known, the comparison remains `unknown`.
+   the result is an explicit mismatch. A path never overrides a digest
+   disagreement.
 6. Missing authorization mappings and incomplete or truncated input coverage
    remain unknown or truncated rather than becoming absence claims.
 

docs/jeb-analysis.md

@@ -22,15 +22,6 @@ inspection and decompilation while refusing `open_jeb_project`. Catalog discover
 uses one 60-second deadline across connection and pagination; a responsive server
 cannot keep discovery running indefinitely by returning more pages.
 
-Each upstream tool call has an absolute 60-second request deadline by default.
-Set `REA_JEB_MCP_TIMEOUT_MS` to a positive decimal number of milliseconds to
-select a different per-request budget, for example `REA_JEB_MCP_TIMEOUT_MS=300000`
-for a five-minute decompilation. This budget starts after discovery and applies
-to each individual `tools/call`; it does not extend the separate catalog deadline
-or establish one end-to-end deadline across a whole CLI or MCP operation. A
-request that reaches its budget returns a typed timeout, while caller
-cancellation remains a cancellation.
-
 Verified against JEB 5.48.0 (Linux x64, licensed build) serving `jeb-mcp-server` 1.3.0 over streamable HTTP.
 
 ## Operations
@@ -52,7 +43,6 @@ All four are read-only with respect to the target file; only `open_jeb_project`
 - The engine caps `list_units` pages at 100; a full page is reported as `coverage: "partial"` because more units may exist. An empty remainder is `complete` only when fewer units than requested were returned.
 - When `decompile_jeb_item` omits `unit_path`, the engine implicitly selects the project's first code unit; REA reports `unit_path: null` and a limitation instead of guessing the effective unit.
 - Engine refusals (`success: false` envelopes) are preserved as unsupported-target errors carrying the engine's own message, for example a nonexistent item address.
-- Successfully parsed client information is reused for the lifetime of the MCP connection, including when the engine omits its version. Explicit client inspection and availability probes refresh it.
 - An unreachable endpoint is a provider-availability failure with recovery guidance; REA does not retry or spawn the engine.
 
 Real-engine verification lives in the JEB lane described in [testing.md](testing.md); mock transport tests do not establish real-engine compatibility.

docs/kuna-provider.md

@@ -1,113 +0,0 @@
-# Kuna provider
-
-[Kuna](https://github.com/Noelo-Lab/kuna) is an Apache-2.0 decompiler distributed as one `kuna` executable. REA uses a `kuna` you supply. It does not download, install, update or bundle Kuna. REA verified this provider with Kuna 1.833; it accepts other releases and reports them as unverified in `rea doctor` and in each analysis profile.
-
-Kuna is static: it reads the selected image and never executes it.
-
-## Configure
-
-```bash
-export REA_KUNA_COMMAND=/absolute/path/to/kuna
-rea doctor --provider kuna
-```
-
-Select it explicitly with `--provider kuna`, MCP's `open_binary.provider_id: "kuna"`, or `REA_ANALYSIS_PROVIDER=kuna`. With Kuna and another provider configured for the same target, `auto` reports `ambiguous` instead of choosing one.
-
-| Setting                       | Default                                                                                                                                 | Meaning                                                                                                                                                                                  |
-| ----------------------------- | --------------------------------------------------------------------------------------------------------------------------------------- | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
-| `REA_KUNA_COMMAND`            | none (required)                                                                                                                         | Absolute path of the `kuna` executable.                                                                                                                                                  |
-| `REA_KUNA_CACHE_DIR`          | `~/Library/Caches/rea/kuna` (macOS), `$XDG_CACHE_HOME/rea/kuna` (Linux; `~/.cache/rea/kuna` when `XDG_CACHE_HOME` is unset or relative) | Absolute directory REA owns for project exports. Kuna's own spec cache also lives here, not in your Kuna cache.                                                                          |
-| `REA_KUNA_CACHE_MAX_BYTES`    | 4 GiB                                                                                                                                   | Size cap; least recently used exports are evicted above it.                                                                                                                              |
-| `REA_KUNA_PROJECT_TIMEOUT_MS` | 30 minutes                                                                                                                              | Deadline for whole-program inventory/export, reference and string scans.                                                                                                                 |
-| `REA_KUNA_TIMEOUT_MS`         | 120 s                                                                                                                                   | Deadline for one single-function decompile, and for the inventory run REA makes when the export ends without one.                                                                        |
-| `REA_KUNA_JOBS`               | 1                                                                                                                                       | `decompile-project --jobs`. 1 is Kuna's reference answer; more jobs finish sooner but lose callee-first prototypes, and change about 40–60% of function bodies on the measured binaries. |
-
-Windows is not supported yet. Supported targets are ELF and thin Mach-O executables for x86-64, AArch64 and ARM; PE and universal Mach-O are rejected with a typed reason.
-
-## What Kuna answers
-
-| Tool                                                        | Source                                                                                                                           |
-| ----------------------------------------------------------- | -------------------------------------------------------------------------------------------------------------------------------- |
-| `list_procedures`, `search_procedures`, `procedure_address` | Kuna's callable inventory (`kuna functions --json`), including import slots it does not decompile                                |
-| `address_name`                                              | Function entries, then the data labels Kuna's export assigns                                                                     |
-| `procedure_pseudo_code`, `batch_decompile`                  | The project export, or a single-function run while the export builds                                                             |
-| `procedure_assembly`                                        | The project export's labeled listing                                                                                             |
-| `procedure_callers`, `procedure_callees`                    | Call-kind edges from a lazy, body-free Kuna graph; synthetic import nodes are accepted by address                                |
-| `list_strings`, `search_strings`                            | Typed string candidates from one cached, reference-free scan; exact-address, literal and ECMAScript regex selection              |
-| `xrefs`                                                     | Exact-address incoming reference sites, with forwarding aliases filtered explicitly                                              |
-| `analyze_function`                                          | Pseudocode and assembly from the export, plus call relationships; typed references, comments, strings and CFG remain unavailable |
-
-Typed procedure references, basic blocks, raw-memory tools, annotations and type recovery are not available from this provider. Use another provider for those operations.
-
-## How answers are produced
-
-The first text or assembly request in a session looks for this target's export in the cache. `list_documents` reads the selected path without initializing analysis. Inventory, function lookup, string queries, call relationships and xrefs do not start a C export. A data-name lookup starts it only when the address is absent from the function inventory. The export is keyed by the target's SHA-256, the Kuna executable's SHA-256, its version and `--jobs`.
-
-- **Warm cache:** analysis reads reuse the verified export. A fresh server verifies its file digests once, even for concurrent first requests; that cost scales with export size.
-- **Cold cache:**
-  - REA starts `kuna decompile-project` in the background on a private copy of the target.
-  - Meanwhile, pseudocode comes from one `kuna decompile --addr` run. Name and address lookups, and listings, use the inventory the export takes with `kuna functions --json` before it decompiles. The session runs `kuna functions` itself, under `REA_KUNA_TIMEOUT_MS`, only when no export is building (an inventory-only request does not start one) or the export ends without an inventory.
-  - Requests for the same function share one run; it stops when its last waiting request is cancelled. Each run analyzes the whole image again in its own process, so one REA process runs at most as many at once as the host has cores beyond `REA_KUNA_JOBS` (at least one). Further requests wait in order, and a waiting request is answered from the export if it finishes first. A run whose stop REA cannot prove keeps its slot until `close_binary` proves it stopped.
-  - The session keeps each completed single-function text, up to 16 MiB in all with the least recently used dropped first, and answers repeats from it until the export can. After a failed export that lasts for the session.
-  - Assembly and data names wait for the export; progress notifications report the wait every ten seconds. A session does not rebuild a failed export: requests that need it fail with `retryable: false`, the export's failure, its captured Kuna output and what to change before reopening the target. A setting such as `REA_KUNA_PROJECT_TIMEOUT_MS` or `REA_KUNA_JOBS` is read when REA starts, so changing it also needs a restart. Pseudocode keeps using single-function runs.
-  - A single-function answer says so in its limitations. It lacks the export's whole-program prototypes, so a later request can return different text for the same function.
-
-Pseudocode, assembly, `analyze_function` and data-name answers record where their text came from in `raw_result.source`: `single-function`, or `project-export` with the cache directory. `procedure_pseudo_code` and `procedure_assembly` answers from the export also name the file, byte span and the file's SHA-256. Combined `analyze_function` answers retain both facet records in `raw_result.source.files`, each with its file, digest and byte span. Both texts come from one export; losing that project retries the complete report. Listings and procedure lookups carry no `raw_result`. Agents can open or search the export's `.c` and `.asm` there directly when that is cheaper than calling a tool per function. Text read that way is target-derived, like any decompiler output, but it bypasses the untrusted-content marker that REA's tool results carry.
-
-The background export belongs to the session. `close_binary`, or the end of a CLI command, cancels it unless another session still waits for it. A one-shot CLI decompile therefore answers from a single-function run; any request that needs the export, such as `procedure_assembly` or `analyze_function`, keeps it.
-
-The assembly label index is scanned once per export reader. Cancelling a request stops its wait without interrupting other readers; closing the session aborts and drains the shared scan before releasing its files.
-
-Regex procedure and string search uses ECMAScript Unicode matching in a cancellable worker with a five-second matching deadline. Literal matching remains the default. Cancellation or a matching deadline leaves the session available.
-
-Single-function subprocess output and each cached source facet share a 16 MiB buffered-text capacity. Cached spans are checked before allocation; larger text remains in the local export and the error identifies the file and range. `analyze_function` initially returns the complete dossier, which can still be large; later retained views do not remove that first transfer. Prefer the individual text tools for a focused question.
-
-## Strings
-
-`list_strings` and `search_strings` share one lazy `kuna strings --json --encoding all --min-length 5 --termination any --no-xrefs` scan of the digest-checked private input. Skipping references avoids program lifting, a call graph and a C export. REA validates the input, scan policy, every row and the total before caching any facts. Encoding, character count, byte length and terminator facts must agree; supplementary UTF-8 characters count as Unicode scalars. Malformed output is an error, not an empty search. REA parses the JSON as Kuna writes it instead of buffering it, so the scan has no fixed size: Kuna writes about 290 bytes per row, 31 MB for a 20 MB Ghostty binary and 179 MB (611k rows) for an arm64 Firefox `XUL`. Rows are validated one at a time, and the first contradiction stops Kuna. Text REA does not keep is dropped unassembled; kept text and retained rows are admitted against the REA process's live heap headroom as they arrive; a refusal is a `memory` resource constraint with `retryable: false`, and closing other targets or starting REA with a larger Node.js heap makes room. String scans use the whole-program `REA_KUNA_PROJECT_TIMEOUT_MS` deadline; `REA_KUNA_TIMEOUT_MS` applies to single-function decompilation. The parsed inventory belongs to one selected target/executable profile and expires on session close; Kuna diagnostics beyond their 8 MiB buffer are retained as a failure until close, while other failures are not cached.
-
-Results keep exact u64 virtual addresses, decoded text, native encoding, terminator status and byte length including any terminator. Kuna scans mapped sections or segments for runs of at least five characters; unterminated fragments can include instruction bytes. `all` includes ASCII, UTF-8 and the engine's Latin-range UTF-16LE reading. Other text, including short strings, non-Latin wide text and UTF-16BE, can remain undiscovered. An empty result does not prove absence.
-
-Use `search_strings` for the matching rows or `list_strings` with an exact address for that location. Literal and regex matching run in REA, preserving the existing case and ECMAScript Unicode semantics instead of substituting Kuna's different regex dialect. Procedure and string regex queries share one worker slot per session. Input projections are materialized only after admission, so queued queries retain no per-query inventory arrays. Close cancels and drains matching. Native metadata queries also share one admission slot, including references; a failed stop retains admission until cleanup is proven.
-
-`raw_result.strings` reports the source JSON digest/size, scanned scope, extraction policy, complete inventory count and selected count without copying unrequested text into the answer. Omit the address from `list_strings` to retrieve the complete inventory as Evidence; normal session retention and bundle export apply, including transport-capacity errors for oversized inline replies. These operations preserve their complete-result contracts and do not add paging. Function-referenced string facets in `analyze_function` remain unavailable; call `xrefs` explicitly when references to one returned string are needed.
-
-## Calls and references
-
-The first call query runs `kuna decompile-graph --functions ''`, admitting no C or assembly bodies. One validated graph and forward/reverse indexes serve later call queries and existing `get_call_graph` / `trace_call_path` workflows. Numeric u64 addresses are parsed from their original JSON tokens. Only `call` edges become callers/callees; jumps and data references retain their distinct meaning. Graph counts, edge endpoints and ordering are validated before any relationship is returned. A forwarding address may be an instruction inside a function, so it is retained separately and never promoted to a function node or call edge. Reported indirect calls make affected relationship coverage partial; no target is invented for them.
-
-`xrefs` runs native `xrefs --to ADDRESS --json` on demand. Kuna unifies forwarding aliases and suppresses edges internal to their class; REA filters to the requested address and records the excluded-row count. Duplicate source sites appear once. An empty result cannot establish the absence of references. Addresses are explicit u64 values or exact, unambiguous procedure names; Kuna has no cursor.
-
-REA parses the graph as Kuna writes it, like the string scan, so the graph has no fixed size: a 53 MB Raycast binary produces 157 MB (180k functions, 773k edges), which REA retains in about 93 MB after a whole-program walk of about a minute. Unrequested bodies are refused before any of their text is assembled, and edges are indexed as they arrive, so retained rows and their indexes are admitted against live heap headroom. Xref JSON admits at most 16 MiB before parsing. Output or Kuna diagnostics beyond a buffer are reported as a `memory` resource constraint with `retryable: false`, because the same target and executable produce the same output. The session remembers such a graph failure, so later call queries fail at once instead of repeating the whole-program walk. The graph is cached for the selected target and executable profile within one session. Xref reuse is an LRU charged by source bytes plus metadata, limited to 16 MiB and 128 entries; at most eight distinct native xref queries may be pending. Reference commands run one at a time per session and share the provider's foreground budget with single-function decompiles. An unproven process stop retains its admission slots until cleanup succeeds. Concurrent callers share work, individual cancellation releases only that waiter, and the last departing waiter cancels its producer and receives any unproven cleanup. Session close aborts and drains producers, releases parsed caches and retries any retained process/file cleanup.
-
-Evidence includes only selected addresses or dossier neighbors, the producing JSON's SHA-256/byte count, coverage and relevant function facts; unrequested program-wide JSON and instruction text are omitted. Reference caches are in memory and expire on close: a fresh CLI process or MCP server rebuilds them. A first call query therefore costs a whole-program reference walk even when a C export is warm. These operations do not establish full Ghidra/IDA feature parity.
-
-## Provenance and limitations
-
-- Addresses and bytes are Kuna's observations of the image. Procedure entries and extents are its derivations: extents are upper bounds clipped at the next entry, and Kuna can split one function at an entry its own analysis infers. Pseudocode is its reconstruction, never original source.
-- Pseudocode and assembly are exact Kuna text; text from Kuna and from another provider is not comparable as equal or different.
-- Results are re-read rather than replayed from REA's analysis snapshots, because a cold answer can differ from the export's.
-
-## Cache ownership
-
-REA writes Kuna's exports only inside `REA_KUNA_CACHE_DIR`:
-
-- `projects/<key>/` holds published, immutable exports with a manifest of file digests.
-- `staging/` holds builds whose processes may still be live.
-- `trash/` holds retired builds and evicted exports awaiting removal.
-- `home/` is Kuna's HOME.
-
-Builds publish by one rename, so a reader sees a complete export or none. A session keeps the export it uses from eviction only within its own REA process. If another REA process sharing the cache evicts it, the session rebuilds it; meanwhile pseudocode falls back to single-function runs. A damaged or edited export is removed and rebuilt. Staging moves to `trash/` for removal only after REA proves its Kuna process stopped. Staging of a process it cannot prove stopped is never swept; REA keeps it owned, retries the stop on `close_binary`, and reports it until the stop is proven. Failed file removal also stays bound to its export and is retried by `close_binary`; closing does not report success while that cleanup remains. `rea doctor --provider kuna` reports the cache directory without creating it.
-
-## Verify with a real Kuna
-
-```bash
-REA_KUNA_COMMAND=/absolute/path/to/kuna npm run verify:kuna
-# Compare with Ghidra on caller-built binaries
-REA_KUNA_COMMAND=/absolute/path/to/kuna GHIDRA_INSTALL_DIR=/absolute/path/to/ghidra \
-  npm run verify:kuna -- --targets DIR --functions inflate,crc32 --compare-ghidra
-```
-
-The lane compiles a small source-owned fixture with the host C compiler and verifies the MCP workflow end to end. `--targets DIR --functions a,b` adds caller-built binaries. `--compare-ghidra` (with `GHIDRA_INSTALL_DIR`) runs those same functions through Ghidra; it requires `--targets` and `--functions` and refuses empty matrices or requested function names missing from every target. See [testing](testing.md#kuna-lane) for coverage.
-
-Failed runs also report process-lineage evidence and exit unsuccessfully. If provider or transport cleanup is unconfirmed, the report says `cleanup: "incomplete"` and records `retained_workspace`; that directory is preserved for investigation and cleanup retries.

docs/managed-code-analysis.md

@@ -352,7 +352,7 @@ install it or its toolchain. The [NativeAOT guide](ghidra-nativeaot.md) defines
 these routes, their layout/host restrictions, derived-memory provenance, and
 verification coverage.
 
-REA's experimental Windows Ghidra boundary admits native x86, x86-64, ARMNT (Thumb-2) and ARM64 PE
+REA's experimental Windows Ghidra boundary admits native x86 and x86-64 PE
 applications and DLLs for static analysis. For x64 PE NativeAOT, the read-only
 parser also runs there; the [NativeAOT guide](ghidra-nativeaot.md) lists what a
 Windows host covers.

docs/mcp-contracts.md

@@ -393,31 +393,15 @@ concrete version, selection source, and complete analysis profile through
 choices return typed selection details. A selected provider is never replaced
 automatically after a runtime failure.
 
-Each provider client receives `binary_session.analysis_run.run_id` before any
-provider startup, including clients whose startup fails. `process_lineage` is
-`not_observed` until a dynamic provider starts, then becomes `snapshots` with
-every started provider's identity
+Every successful target transition allocates `binary_session.analysis_run.run_id`
+before any provider startup. `process_lineage` is `not_observed` until a dynamic
+provider starts, then becomes `snapshots` with every started provider's identity
 and retained ownership observation. Each observation records `observed_at` and
 is `unavailable` with a reason when ownership could not be revalidated, or
 `verified` with launcher PID, parent PID, process group, and descendants observed
 at that bounded check. These are historical snapshots, not live process
 inventories, and do not claim that no short-lived descendant existed.
 
-`binary_session.cleanup_pending` reports whether the session retains a provider
-client, session file resource, or provider-candidate resource whose cleanup
-has not succeeded. It can be true with
-`open: false`; target retirement does not establish resource release. For a
-retained provider client, health, activity, and lineage remain available under
-its original `analysis_run.run_id` where the provider supplies them.
-Successful provider cleanup clears the retained run;
-a replacement client receives a fresh run ID. Follow the cleanup error's
-reported resources and recovery action before reopening; a missing health
-observation does not establish an idle provider.
-File cleanup can also remain after snapshot publication or after profile
-inspection fails or is cancelled before a provider client exists. If no client
-remains, no provider run or health observation is available; follow the cleanup
-error's reported resources.
-
 ## Progress and cancellation
 
 REA accepts ordinary `tools/call` progress tokens. The numeric `progress` counts
@@ -435,9 +419,6 @@ Provider calls receive the request cancellation signal. Artifact traversal,
 hashing, version comparisons, Hopper requests, and process capture
 check the same signal. Cancellation is distinct from timeout. A cleanup failure
 uses `cleanup_incomplete` and lists only the owned resource kinds that remain.
-Once those owners confirm cleanup, composed failures recover their original
-typed primary outcome and recovery guidance. Historical composition diagnostics
-remain in `details.cleanup_history`, separate from the primary diagnostics.
 An atomic Evidence bundle or snapshot write can publish its complete output
 before staging cleanup fails. In that case, `details.published: true`,
 `details.published_path`, and `details.bytes` retain the publication receipt.
@@ -447,25 +428,12 @@ Native call tracing and process capture retain available observations in
 `details.partial_observation` on failure, including when cleanup succeeds.
 The observation reports its partial coverage; cleanup details describe host
 state separately from the execution failure.
-For these tools, cancellation observed during result finalization or owned
-cleanup also returns typed cancellation with the available observations.
-A normal target exit does not establish request completion. Incomplete cleanup
-still takes precedence and retains its resource diagnostics.
 A process capture that fails during a finalization interval keeps every signal
 attempt and its delivery result in `details.partial_observation`, with
 `elapsed_ms` and `exit_code` null when no exit was observed.
 Derived comparisons and reconstruction verification yield before computation
 and before publication, so cancellation cannot race with successful Evidence.
 
-Bundle recovery requires a recorded Evidence ID. Some provider errors carry
-typed raw observations in `details.partial_observation` instead of Evidence.
-Those raw observations are not recorded in the Evidence bundle. If the SDK
-suppresses the error reply after client cancellation, Evidence tools cannot
-recover them. An empty bundle does not prove that no partial work or side
-effect occurred; output receipts and cleanup observations remain distinct.
-The broader retention decision is tracked in
-[#4276](https://github.com/morluto/rea/issues/4276).
-
 `analyze_javascript_application` also yields between reconstruction phases and
 during graph/result sealing, cross-graph binding checks, Evidence JSON validation,
 and canonical hashing. Its final result validation reuses exact graphs whose
@@ -529,10 +497,7 @@ declared by their tools. Artifact extraction materializes the selected regular
 files into a fresh REA-chosen temporary directory and reports its path.
 
 `analyze_javascript_application` reads the supplied local directory or ASAR path
-and returns its result and Evidence inline. Its owned analysis worker and private
-temporary source files are declared as `launchesProcess` and `writesFilesystem`,
-including for a single JavaScript source. This internal analysis does not execute
-the supplied application code.
+and returns its result and Evidence inline.
 
 ## Ghidra first-query deadlines and recovery
 
@@ -552,14 +517,6 @@ These deadlines have different owners:
 | Darwin swiftc helper | REA allows 120,000 ms by default for ownership-helper compilation; `REA_SWIFTC_COMPILE_TIMEOUT_MS` accepts decimal integers from 1–2,147,483,647 ms. Invalid values fail configuration validation.                                  |
 | Individual tool call | The client bounds its wait, including cold engine startup. The pinned client SDK 2.3.1 defaults to 60,000 ms and can cancel earlier than REA's startup deadline.                                                                    |
 
-For [Codex and Kimi registrations](client-configuration.md), setup supplies
-missing tool deadlines from the known provider allowance plus 120 seconds of
-operation headroom: 450 seconds with the default Ghidra allowance, or 2820
-seconds with `REA_GHIDRA_STARTUP_TIMEOUT_MS=2700000`. Positive caller-selected
-deadlines remain unchanged. Doctor reports an informational recommendation
-when a configured deadline is shorter than the known provider allowance. An
-explicit JEB upstream request budget also contributes to that allowance.
-
 For an already connected client using the pinned SDK, request options are the
 **second** argument of `callTool`:
 
@@ -589,20 +546,10 @@ Waiting notifications stop when startup settles or the caller cancels. They do
 not measure engine work completed.
 
 The pinned SDK can reset the request's inactivity timeout on progress with
-`resetTimeoutOnProgress: true`. These options belong in the same second
-argument of `callTool`. Without that explicit client policy, the default
-60-second request deadline still expires despite waiting notifications.
-
-SDK 2.3.1 checks `maxTotalTimeout` when progress resets the timer; it does not
-schedule a separate absolute timer for that setting. A silent interval can
-therefore run beyond the declared total. For an absolute caller deadline,
-also pass `signal: AbortSignal.timeout(totalBudgetMs)`. If the caller already
-has a cancellation signal, preserve both with
-`AbortSignal.any([callerSignal, AbortSignal.timeout(totalBudgetMs)])`.
-`maxTotalTimeout` can still bound progress resets, and REA's provider startup
-deadline still applies. Choose the total budget for the expected workload;
-neither server configuration nor progress can override a remote caller's
-deadline.
+`resetTimeoutOnProgress: true`. Also set `maxTotalTimeout` to bound the complete
+request; the provider's startup deadline still applies. These options belong in
+the same second argument of `callTool`. Without that explicit client policy, the
+default 60-second request deadline still expires despite waiting notifications.
 
 The 240-second setting is a measured example, not a universal timeout: a
 controlled Linux x64/WSL2 fixture took about 64 seconds for its first overview
@@ -726,20 +673,6 @@ after SDK conversion and check advertised validation and actual calls.
 Individual model APIs can impose additional nesting limits; complete producer
 captures can exceed ten structural levels.
 
-Boolean literal constraints in input schemas are relaxed only in this
-advertisement. For example, a boolean `const` is presented as `type: boolean`;
-an affected `not` is omitted, conditional predicates and their branches are
-omitted together, pure boolean-literal `oneOf` branches collapse to a boolean,
-and other affected `oneOf` branches are presented as `anyOf` to retain branch
-guidance without making overlapping widened branches reject inputs.
-This can make the advertised schema accept inputs the canonical contract
-rejects. The MCP handler still validates every call with the canonical
-contract. The Gemini CLI verifier checks the outgoing
-`parametersJsonSchema` and canonical contract examples against that declaration
-using a loopback model fixture; it does not establish live Google API or
-OpenCode client behavior. Set `REA_VERIFY_GEMINI_SCHEMA_PROFILE=compact` to
-verify the compact advertisement through the same client boundary.
-
 ### Compact input schema profile
 
 Some function-calling providers reject a request while any single tool's
@@ -757,10 +690,7 @@ reported by strict-depth MCP clients in [#2813](https://github.com/morluto/rea/i
 WorkBuddy/CodeBuddy gateways have also rejected full REA catalogs with an
 opaque `11133` error while accepting the compact profile
 ([#2999](https://github.com/morluto/rea/issues/2999)); compatibility depends on
-the selected gateway and model. That report used ZCode through a gateway to a
-Kimi-K3 backend, not the WorkBuddy MCP client. Set the profile on REA's
-registration in the actual MCP host; the host's name alone does not identify
-the downstream model or its schema constraints.
+the selected gateway and model.
 
 The compact profile renders the same tool set, output schemas, annotations,
 and canonical server-side validation. It changes only the advertised input

docs/mcp-prompts.md

@@ -111,12 +111,8 @@ list does not establish that the target has no procedures.
 Suggestions are Unicode-normalized, case-insensitive prefix matches. The server
 deduplicates them and sorts by code point for deterministic results. Procedure
 completion derives candidates from the complete inventory, so a name is offered
-only when it identifies one address in that inventory. A completion reply
-carries at most 100 values, the MCP limit. `total` counts every match and
-`hasMore` is `true` when values were omitted. Completion has no paging
-controls. A longer prefix reaches an omitted value only when it excludes other
-matches; matching uses normalized, case-insensitive forms, so a value can stay
-unreachable when more than 100 matches share its normalized prefix.
+only when it identifies one address in that inventory. Completion returns all
+matching values; it does not expose paging controls.
 
 ## Lifecycle and safety
 

docs/native-investigation.md

@@ -270,9 +270,7 @@ Mach-O image. Architecture
 `file_offset` values are container-relative. Entrypoint, segment and section
 `file_offset` values retain their source meaning and are relative to the
 selected Mach-O slice. Raw load-command fields retain their original values.
-A field otool prints more than once, such as each `LC_BUILD_VERSION` tool, is
-keyed `name #n` in print order. Each `LC_LINKER_OPTION` string is keyed
-`string #n` and checked against the declared `count`. Evidence locations map the LC_MAIN entrypoint and nonempty file-backed segment
+Evidence locations map the LC_MAIN entrypoint and nonempty file-backed segment
 ranges to container offsets by adding the observed slice offset. Zero-fill
 segments do not produce file ranges. When the selected slice's container offset
 is unknown, those mapped locations are omitted with an explicit limitation;
@@ -380,12 +378,7 @@ complete observation.
   property: `N` means `nonatomic`; a complete typed attribute string without
   `N` means the Objective-C default `atomic`;
   missing or incomplete attribute metadata leaves `atomicity` and any
-  unestablished read-only value null. A type attribute whose quoted class name
-  never closes is incomplete and marks `objc_properties_categories` partial
-  with `property_attributes_incomplete`. A property record that cannot be
-  decoded, such as one with an empty or unmapped name, is reported as
-  `property_decode_failed` at its entry address while sibling properties are
-  retained. `is_meta_class`, `is_root_class`, and
+  unestablished read-only value null. `is_meta_class`, `is_root_class`, and
   `ivar_count` are also nullable when the selected provider exposes only symbol
   names. Class implementation methods have null `is_required` and `is_optional`
   fields because those facts apply to protocol declarations; decoded protocol
@@ -398,10 +391,6 @@ complete observation.
   coroutine tables, and inherited overrides, have explicit unsupported or
   partial coverage. Other providers retain the
   existing symbol-based inventory with its narrower coverage.
-  Symbols without a reported location remain in that inventory: Swift symbol
-  `address` and Objective-C `implementation_address` are null. An empty provider
-  address is retained as `reported_address` in the symbol's evidence, whose
-  location also remains unknown. Nonempty provider address syntax is preserved.
 
 ## Native desktop observation
 
@@ -455,11 +444,6 @@ The run ends when the process exits, `max_events` entries are recorded,
 Bounded termination reports partial coverage. REA checks process termination
 using a launch-time OS start identity; if ownership or cleanup cannot be
 verified, the result or error preserves that uncertainty. The result reports:
-Launch errors keep the fact that LLDB created a process separate from whether
-it remains alive. An exited `SBProcess` is reported as exited only after LLDB
-confirms that state; unresolved ownership remains retained for cleanup retry.
-Cancellation observed while output and Evidence are finalized returns partial
-cancellation Evidence, even if the target has already exited.
 
 - the outcome, exit status and captured stdout/stderr (1 MiB kept per stream
   while excess bytes are drained and counted without growing capture files).
@@ -490,11 +474,6 @@ with partial coverage. Available output prefixes remain inline; their byte
 counts are observed lower bounds when final drain counters are unavailable.
 The original failure classification and cleanup uncertainty remain separate.
 An interrupted journal row is ignored with an explicit limitation.
-If the trace completed before cancellation or runtime-directory cleanup failed,
-the retained observation also keeps its exit status, termination proof, launch
-identity, breakpoint results and final stream counters. Those fields remain
-absent when the interrupted producer did not report them; partial coverage alone
-does not mean that every retained fact is incomplete.
 
 Only entries are observed: return values, floating-point and stack arguments,
 and inlined or `objc_direct` calls are not. The target runs with the current
@@ -511,7 +490,7 @@ is present. A denied trace reports the `debugger-attach-denied` reason.
 Install a Ghidra 12.1.x release and the 64-bit full JDK it declares, then configure REA to
 use them. Ghidra analysis supports Linux x64/arm64 and macOS x64/arm64; each installation requires
 the matching native decompiler. Experimental Windows x64 P0 admits native
-x86, x86-64, ARMNT (Thumb-2) and ARM64 PE applications and DLLs, plus explicitly selected
+x86 and x86-64 PE applications and DLLs, plus explicitly selected
 [raw NMOS 6502 images](raw-binary.md#nmos-6502) with a caller-supplied load address,
 on fixed local NTFS volumes. Other raw CPU families remain unsupported on Windows.
 The boundary uses bundled Job Object ownership, protected runtime DACLs, and
@@ -591,24 +570,6 @@ Exact and ambiguous value counts describe emitted root/object value instances;
 a root and an object may contain the same value. Archive digests identify the
 original bytes.
 
-Interface Builder's XML and binary plist archives use the same number metadata
-and exact-decimal representation for emitted node attributes. Projection follows
-object and connection classification, so archive IDs, UID links and graph counts
-keep their meaning. Precision limitations name the source document. Unsafe
-integer-literal counts cover the archive, including fields not emitted as node
-attributes; exact and ambiguous projection counts cover emitted attribute values.
-Integral reals stay numbers, and ambiguous or incompletely observed values retain
-explicit precision limitations. Before plist decoding, the existing aggregate
-decode budget reserves estimated room for number metadata and attribute
-projection; these estimates are not a hard process-memory bound. Native
-NIBArchive decoding is unchanged by this plist-specific representation.
-
-Dates are reported as `{ "$plist_type": "date", "iso8601": "<timestamp>" }`. A
-date the decoder cannot represent, such as an XML date with a year beyond 9999
-or a negative year, is reported as `{ "$plist_type": "date", "iso8601": null }`
-with a counted limitation; the rest of the plist or archive is still decoded.
-`inspect_plist` and Interface Builder decoding use the same projection.
-
 ## Locate a byte signature
 
 Use `search_bytes` after opening a target with Ghidra to locate a known constant

docs/process-capture.md

@@ -425,9 +425,7 @@ results for unaffected dimensions and mark affected dimensions unknown; an
 incomplete capture cannot locate the first divergence across all dimensions.
 Trace assertions use coverage for the sources they select, so an assertion
 about complete raw terminal output need not fail because rendered snapshots
-were omitted. A trace difference applies to the dimensions identified by its
-diagnostic; unrelated dimensions retain their own comparison, including unknown
-coverage. Captures missing `truncation_details` are rejected on import;
+were omitted. Captures missing `truncation_details` are rejected on import;
 preserve them as historical files and recapture for current comparisons.
 `limits.file_bytes` is already the cumulative whole-file hashing budget,
 independent of `limits.output_bytes`, which bounds retained terminal content.

docs/raw-binary.md

@@ -25,31 +25,27 @@ rea inspect-native-load-image /absolute/path/to/ecu.bin --target-format raw-bina
 }
 ```
 
-`architecture` is one of `x86`, `x86_64`, `arm`, `arm64`, `6502`, or `m68k`. `entry_point` is a
+`architecture` is one of `x86`, `x86_64`, `arm`, `arm64`, or `6502`. `entry_point` is a
 hexadecimal address of the form `0x…`. The complete file is mapped starting at
 that address, and Ghidra seeds an `entry` function there before auto-analysis.
-ARM and AArch64 entries must be 4-byte aligned; m68k entries must be 2-byte
-aligned; x86 and 6502 entries may be byte-aligned.
+ARM and AArch64 entries must be 4-byte aligned; x86 and 6502 entries may be byte-aligned.
 For 6502, the entry and complete mapped file must fit within `0x0000..0xffff`;
 images that cross the 16-bit boundary are rejected before provider startup.
-For m68k, the mapping must fit within `0x0..0xffffffff`.
 `open_binary` and an open `binary_session` return the canonical `entry_point`
 for raw targets so callers can verify the selected mapping directly.
 Omitted `format` keeps header-based detection; architecture and entry without
 `format=raw-binary` are rejected.
 
-Ghidra imports a private snapshot with `BinaryLoader` and these generic
-languages and compiler specifications. Each family has one fixed byte order:
-m68k is big-endian and the others are little-endian.
+Ghidra imports a private snapshot with `BinaryLoader` and these little-endian
+generic languages and compiler specifications:
 
-| architecture | language_id           | compiler_spec_id |
-| ------------ | --------------------- | ---------------- |
-| x86          | `x86:LE:32:default`   | `gcc`            |
-| x86_64       | `x86:LE:64:default`   | `gcc`            |
-| arm          | `ARM:LE:32:v7`        | `default`        |
-| arm64        | `AARCH64:LE:64:v8A`   | `default`        |
-| 6502         | `6502:LE:16:default`  | `default`        |
-| m68k         | `68000:BE:32:default` | `default`        |
+| architecture | language_id          | compiler_spec_id |
+| ------------ | -------------------- | ---------------- |
+| x86          | `x86:LE:32:default`  | `gcc`            |
+| x86_64       | `x86:LE:64:default`  | `gcc`            |
+| arm          | `ARM:LE:32:v7`       | `default`        |
+| arm64        | `AARCH64:LE:64:v8A`  | `default`        |
+| 6502         | `6502:LE:16:default` | `default`        |
 
 Compiler specifications select analysis conventions; they do not identify the
 original compiler or ABI of a headerless target. Ghidra's x86 languages do not
@@ -110,40 +106,12 @@ unchanged source bytes and complete runtime cleanup. Windows requires the
 matching native addon; the POSIX provider path has not been exercised by the
 Windows run.
 
-## Motorola 68000
-
-```bash
-rea function /absolute/path/to/image.bin 0x1000 --target-format raw-binary --architecture m68k --entry-point 0x1000 --provider ghidra --json
-rea inspect-native-load-image /absolute/path/to/image.bin --target-format raw-binary --architecture m68k --entry-point 0x1000 --provider ghidra --json
-```
-
-Select only headerless big-endian 68000-family code with a known, even entry at
-file offset 0. Ghidra's `68000:BE:32:default` language decodes the 68040
-superset in the 32-bit `ram` address space. Instructions that a real MC68000
-would not execute are therefore not rejected, and 68020, 68030, CPU32, and
-ColdFire programs are not admitted as those variants. Addresses are not masked
-to the MC68000 24-bit bus. Evidence preserves `architecture: "m68k"`, the
-selected language, entry, file digest, and verified source mapping. Register and
-calling conventions are analysis conventions, not a recovered source ABI.
-
-This lane does not interpret Amiga hunks, Atari ST, or other container headers,
-cartridge or console memory maps, or bank switching. REA does not read the
-initial stack pointer and reset vector from the first eight bytes; select the
-entry explicitly. Windows Ghidra P0 does not admit m68k.
-
-`npm run verify:ghidra:m68k` uses a source-owned 22-byte fixture written as
-annotated hex in the verifier, so it needs no assembler. The lane checks real
-CLI/MCP load-image parity, mapped bytes, a decoded call, decompilation by address
-and file offset, misaligned and out-of-range mappings, unchanged source bytes and
-runtime cleanup. It has been run with Ghidra 12.1.4 on macOS; Linux has not been
-exercised.
-
 ## Limitations
 
 - Headers are not discovered from file bytes. This increment does not guess
   load addresses, vector tables, or memory maps.
-- Big-endian ARM, Thumb-only, Cortex-M, and other Ghidra processor variants are
-  unsupported. m68k is the only big-endian family.
+- Big-endian, Thumb-only, Cortex-M, and other Ghidra processor variants are
+  unsupported.
 - Reset vectors, memory-mapped I/O, and firmware boot sequences are not
   emulated.
 - Independent load-image verification covers source identity, mapped file

docs/readme/README_ar.md

@@ -166,7 +166,7 @@ npx rea-agents@latest setup
 
 <a id="choosing-a-deep-analysis-provider"></a>
 
-تختلف صيغ ملفات الشيفرة الأصلية والأنظمة المضيفة المدعومة باختلاف الموفّر. راجع [إعداد Hopper وGhidra](../installation.md#hopper)، و[دليل IDA](../ida-provider.md)، [Kuna](../kuna-provider.md)، و[دعم Ghidra التجريبي على Windows](../windows-ghidra-p0.md). يدعم Ghidra أيضًا [تحليل DOS ذي 16 بت](../ghidra-dos.md). لاختيار الموفّر، راجع [دليل CLI](../cli.md#choose-a-provider). تحقّق من [توفر الميزات في الإصدارات](../installation.md#released-package-and-main) للميزات المضافة بعد أحدث إصدار على npm.
+تختلف صيغ ملفات الشيفرة الأصلية والأنظمة المضيفة المدعومة باختلاف الموفّر. راجع [إعداد Hopper وGhidra](../installation.md#hopper)، و[دليل IDA](../ida-provider.md)، و[دعم Ghidra التجريبي على Windows](../windows-ghidra-p0.md). يدعم Ghidra أيضًا [تحليل DOS ذي 16 بت](../ghidra-dos.md). لاختيار الموفّر، راجع [دليل CLI](../cli.md#choose-a-provider). تحقّق من [توفر الميزات في الإصدارات](../installation.md#released-package-and-main) للميزات المضافة بعد أحدث إصدار على npm.
 
 ## دراسات الحالة
 
@@ -274,7 +274,7 @@ npx rea-agents@latest setup
 
 ## سجل النجوم
 
-🎉 **250,000 نجمة على GitHub — شكرًا لكم!**
+🎉 **200,000 نجمة على GitHub — شكرًا لكم!**
 
 شكرًا لكل من يستخدم REA، ويبلّغ عن الأخطاء، ويقترح ميزات، ويختبر إصدارات البناء، ويساهم بالإصلاحات.
 

docs/readme/README_de.md

@@ -166,7 +166,7 @@ Statische JavaScript- und .NET-Untersuchungen lesen die bereitgestellten Dateien
 
 <a id="choosing-a-deep-analysis-provider"></a>
 
-Native Formate und unterstützte Hostsysteme unterscheiden sich je nach Provider. Siehe [Hopper- und Ghidra-Einrichtung](../installation.md#hopper), den [IDA-Leitfaden](../ida-provider.md), [Kuna](../kuna-provider.md) und die [experimentelle Ghidra-Unterstützung unter Windows](../windows-ghidra-p0.md). Ghidra unterstützt auch [16-Bit-DOS-Analyse](../ghidra-dos.md). Die Provider-Auswahl beschreibt der [CLI-Leitfaden](../cli.md#choose-a-provider). Prüfe die [Verfügbarkeit in Releases](../installation.md#released-package-and-main) für Funktionen, die seit der neuesten npm-Version hinzugekommen sind.
+Native Formate und unterstützte Hostsysteme unterscheiden sich je nach Provider. Siehe [Hopper- und Ghidra-Einrichtung](../installation.md#hopper), den [IDA-Leitfaden](../ida-provider.md) und die [experimentelle Ghidra-Unterstützung unter Windows](../windows-ghidra-p0.md). Ghidra unterstützt auch [16-Bit-DOS-Analyse](../ghidra-dos.md). Die Provider-Auswahl beschreibt der [CLI-Leitfaden](../cli.md#choose-a-provider). Prüfe die [Verfügbarkeit in Releases](../installation.md#released-package-and-main) für Funktionen, die seit der neuesten npm-Version hinzugekommen sind.
 
 ## Fallstudien
 
@@ -272,7 +272,7 @@ Melde Sicherheitslücken gemäß [SECURITY.md](../../SECURITY.md).
 
 ## Sternverlauf
 
-🎉 **250.000 GitHub-Sterne – vielen Dank!**
+🎉 **200.000 GitHub-Sterne – vielen Dank!**
 
 Danke an alle, die REA nutzen, Fehler melden, Funktionswünsche äußern, Builds testen und Fehlerbehebungen beitragen.
 

docs/readme/README_el.md

@@ -179,7 +179,7 @@ npx rea-agents@latest setup
 
 <a id="choosing-a-deep-analysis-provider"></a>
 
-Οι μορφές κώδικα μηχανής και τα υποστηριζόμενα συστήματα διαφέρουν ανά πάροχο ανάλυσης. Δες τη [ρύθμιση Hopper και Ghidra](../installation.md#hopper), τον [οδηγό IDA](../ida-provider.md) (που περιλαμβάνει προαιρετική γέφυρα MCP για κώδικα μηχανής), [Kuna](../kuna-provider.md) και την [πειραματική υποστήριξη Ghidra στα Windows](../windows-ghidra-p0.md). Το Ghidra υποστηρίζει επίσης [ανάλυση DOS 16 bit](../ghidra-dos.md). Για μεγάλα δυαδικά αρχεία, αύξησε το χρονικό όριο εκκίνησης του παρόχου με `REA_GHIDRA_STARTUP_TIMEOUT_MS` ή `REA_HOPPER_STARTUP_TIMEOUT_MS`. Για την επιλογή παρόχου, δες τον [οδηγό CLI](../cli.md#choose-a-provider). Έλεγξε τη [διαθεσιμότητα ανά έκδοση](../installation.md#released-package-and-main) για λειτουργίες που προστέθηκαν μετά την τελευταία έκδοση στο npm.
+Οι μορφές κώδικα μηχανής και τα υποστηριζόμενα συστήματα διαφέρουν ανά πάροχο ανάλυσης. Δες τη [ρύθμιση Hopper και Ghidra](../installation.md#hopper), τον [οδηγό IDA](../ida-provider.md) (που περιλαμβάνει προαιρετική γέφυρα MCP για κώδικα μηχανής) και την [πειραματική υποστήριξη Ghidra στα Windows](../windows-ghidra-p0.md). Το Ghidra υποστηρίζει επίσης [ανάλυση DOS 16 bit](../ghidra-dos.md). Για μεγάλα δυαδικά αρχεία, αύξησε το χρονικό όριο εκκίνησης του παρόχου με `REA_GHIDRA_STARTUP_TIMEOUT_MS` ή `REA_HOPPER_STARTUP_TIMEOUT_MS`. Για την επιλογή παρόχου, δες τον [οδηγό CLI](../cli.md#choose-a-provider). Έλεγξε τη [διαθεσιμότητα ανά έκδοση](../installation.md#released-package-and-main) για λειτουργίες που προστέθηκαν μετά την τελευταία έκδοση στο npm.
 
 ## Μελέτες περίπτωσης
 
@@ -285,7 +285,7 @@ npx rea-agents@latest setup
 
 ## Ιστορικό αστεριών
 
-🎉 **250.000 αστέρια στο GitHub — σας ευχαριστούμε!**
+🎉 **200.000 αστέρια στο GitHub — σας ευχαριστούμε!**
 
 Ευχαριστούμε όλους όσοι χρησιμοποιούν το REA, αναφέρουν σφάλματα, ζητούν νέες λειτουργίες, δοκιμάζουν builds και συνεισφέρουν διορθώσεις.
 

docs/readme/README_es.md

@@ -166,7 +166,7 @@ La inspección estática de JavaScript y .NET lee los archivos suministrados sin
 
 <a id="choosing-a-deep-analysis-provider"></a>
 
-Los formatos nativos y los sistemas anfitriones compatibles varían según el proveedor. Consulta [configuración de Hopper y Ghidra](../installation.md#hopper), la [guía de IDA](../ida-provider.md), [Kuna](../kuna-provider.md) y la [compatibilidad experimental de Ghidra en Windows](../windows-ghidra-p0.md). Ghidra también admite [análisis de DOS de 16 bits](../ghidra-dos.md). Para elegir un proveedor, consulta la [guía de CLI](../cli.md#choose-a-provider). Comprueba la [disponibilidad por versión](../installation.md#released-package-and-main) de las funciones añadidas después de la última versión publicada en npm.
+Los formatos nativos y los sistemas anfitriones compatibles varían según el proveedor. Consulta [configuración de Hopper y Ghidra](../installation.md#hopper), la [guía de IDA](../ida-provider.md) y la [compatibilidad experimental de Ghidra en Windows](../windows-ghidra-p0.md). Ghidra también admite [análisis de DOS de 16 bits](../ghidra-dos.md). Para elegir un proveedor, consulta la [guía de CLI](../cli.md#choose-a-provider). Comprueba la [disponibilidad por versión](../installation.md#released-package-and-main) de las funciones añadidas después de la última versión publicada en npm.
 
 ## Casos prácticos
 
@@ -272,7 +272,7 @@ Informa de vulnerabilidades siguiendo [SECURITY.md](../../SECURITY.md).
 
 ## Historial de estrellas
 
-🎉 **250.000 estrellas en GitHub: ¡gracias!**
+🎉 **200.000 estrellas en GitHub: ¡gracias!**
 
 Gracias a quienes usan REA, informan de errores, solicitan funciones, prueban compilaciones y contribuyen con correcciones.
 

docs/readme/README_fa.md

@@ -158,7 +158,7 @@ REA به Node.js 22.x (>=22.19)، 24.x (>=24.11) یا 26+، به‌همراه np
 
 <a id="choosing-a-deep-analysis-provider"></a>
 
-فرمت‌های بومی و پشتیبانی سیستم میزبان بر اساس ارائه‌دهنده متفاوت‌اند. [راه‌اندازی Hopper و Ghidra](../installation.md#hopper)، [راهنمای IDA](../ida-provider.md)، [Kuna](../kuna-provider.md) و [پشتیبانی آزمایشی Ghidra در ویندوز](../windows-ghidra-p0.md) را ببینید. Ghidra همچنین از [تحلیل DOS شانزده‌بیتی](../ghidra-dos.md) پشتیبانی می‌کند. برای انتخاب ارائه‌دهنده، به [راهنمای CLI](../cli.md#choose-a-provider) مراجعه کنید. برای قابلیت‌هایی که پس از آخرین انتشار npm اضافه شده‌اند، [وضعیت انتشار](../installation.md#released-package-and-main) را بررسی کنید.
+فرمت‌های بومی و پشتیبانی سیستم میزبان بر اساس ارائه‌دهنده متفاوت‌اند. [راه‌اندازی Hopper و Ghidra](../installation.md#hopper)، [راهنمای IDA](../ida-provider.md) و [پشتیبانی آزمایشی Ghidra در ویندوز](../windows-ghidra-p0.md) را ببینید. Ghidra همچنین از [تحلیل DOS شانزده‌بیتی](../ghidra-dos.md) پشتیبانی می‌کند. برای انتخاب ارائه‌دهنده، به [راهنمای CLI](../cli.md#choose-a-provider) مراجعه کنید. برای قابلیت‌هایی که پس از آخرین انتشار npm اضافه شده‌اند، [وضعیت انتشار](../installation.md#released-package-and-main) را بررسی کنید.
 
 ## نمونه‌های عملی
 
@@ -257,7 +257,7 @@ npx rea-agents@latest setup
 
 ## تاریخچهٔ ستاره‌ها
 
-🎉 **۲۵۰٬۰۰۰ ستارهٔ GitHub — سپاسگزاریم!**
+🎉 **۲۰۰٬۰۰۰ ستارهٔ GitHub — سپاسگزاریم!**
 
 از همهٔ کسانی که از REA استفاده می‌کنند، خطاها را گزارش می‌دهند، قابلیت‌های جدید پیشنهاد می‌کنند، buildها را آزمایش می‌کنند و در بهبود پروژه مشارکت دارند سپاسگزاریم.
 

docs/readme/README_fr.md

@@ -170,7 +170,7 @@ L'inspection statique JavaScript et .NET lit les fichiers fournis sans exécuter
 
 <a id="choosing-a-deep-analysis-provider"></a>
 
-Les formats natifs et les hôtes pris en charge varient selon le fournisseur. Consultez [la configuration de Hopper et Ghidra](../installation.md#hopper), le [guide IDA](../ida-provider.md), [Kuna](../kuna-provider.md) et [la prise en charge expérimentale de Ghidra sous Windows](../windows-ghidra-p0.md). Ghidra prend aussi en charge [l'analyse DOS 16 bits](../ghidra-dos.md). Pour les gros binaires, augmentez son délai de démarrage avec `REA_GHIDRA_STARTUP_TIMEOUT_MS`. Pour le choix du fournisseur, consultez le [guide CLI](../cli.md#choose-a-provider). Vérifiez la [disponibilité dans les versions publiées](../installation.md#released-package-and-main) pour les fonctionnalités ajoutées depuis la dernière version npm.
+Les formats natifs et les hôtes pris en charge varient selon le fournisseur. Consultez [la configuration de Hopper et Ghidra](../installation.md#hopper), le [guide IDA](../ida-provider.md) et [la prise en charge expérimentale de Ghidra sous Windows](../windows-ghidra-p0.md). Ghidra prend aussi en charge [l'analyse DOS 16 bits](../ghidra-dos.md). Pour les gros binaires, augmentez son délai de démarrage avec `REA_GHIDRA_STARTUP_TIMEOUT_MS`. Pour le choix du fournisseur, consultez le [guide CLI](../cli.md#choose-a-provider). Vérifiez la [disponibilité dans les versions publiées](../installation.md#released-package-and-main) pour les fonctionnalités ajoutées depuis la dernière version npm.
 
 ## Études de cas
 
@@ -276,7 +276,7 @@ Signalez les vulnérabilités via [SECURITY.md](../../SECURITY.md).
 
 ## Historique des étoiles
 
-🎉 **250 000 étoiles GitHub — merci !**
+🎉 **200 000 étoiles GitHub — merci !**
 
 Merci à toutes les personnes qui utilisent REA, signalent des bugs, proposent des fonctionnalités, testent les builds et contribuent des correctifs.
 

docs/readme/README_id.md

@@ -173,7 +173,7 @@ Pemeriksaan JavaScript dan .NET statis membaca berkas yang disediakan tanpa menj
 
 <a id="choosing-a-deep-analysis-provider"></a>
 
-Format native dan dukungan sistem host berbeda-beda menurut penyedia. Lihat [penyiapan Hopper dan Ghidra](../installation.md#hopper), [panduan IDA](../ida-provider.md), [Kuna](../kuna-provider.md), dan [dukungan eksperimental Ghidra di Windows](../windows-ghidra-p0.md).
+Format native dan dukungan sistem host berbeda-beda menurut penyedia. Lihat [penyiapan Hopper dan Ghidra](../installation.md#hopper), [panduan IDA](../ida-provider.md), dan [dukungan eksperimental Ghidra di Windows](../windows-ghidra-p0.md).
 
 Ghidra juga mendukung [analisis DOS 16-bit](../ghidra-dos.md).
 
@@ -297,7 +297,7 @@ Laporkan kerentanan melalui [SECURITY.md](../../SECURITY.md).
 
 ## Riwayat Bintang
 
-🎉 **250.000 bintang GitHub, terima kasih!**
+🎉 **200.000 bintang GitHub, terima kasih!**
 
 Terima kasih kepada semua orang yang menggunakan REA, melaporkan bug, meminta fitur, menguji build, dan berkontribusi dalam perbaikan.
 

docs/readme/README_it.md

@@ -170,7 +170,7 @@ L'ispezione statica di JavaScript e .NET legge i file forniti senza eseguire l'a
 
 <a id="choosing-a-deep-analysis-provider"></a>
 
-I formati nativi e il supporto host variano in base al provider. Vedi la [configurazione di Hopper e Ghidra](../installation.md#hopper), la [guida IDA](../ida-provider.md), [Kuna](../kuna-provider.md) e il [supporto sperimentale Windows Ghidra](../windows-ghidra-p0.md). Ghidra supporta anche l'[analisi DOS a 16 bit](../ghidra-dos.md). Per binari di grandi dimensioni, aumenta il timeout di avvio con `REA_GHIDRA_STARTUP_TIMEOUT_MS`. Per la selezione del provider, vedi la [guida CLI](../cli.md#choose-a-provider). Controlla la [disponibilità delle release](../installation.md#released-package-and-main) per le funzionalità aggiunte dall'ultima release npm.
+I formati nativi e il supporto host variano in base al provider. Vedi la [configurazione di Hopper e Ghidra](../installation.md#hopper), la [guida IDA](../ida-provider.md) e il [supporto sperimentale Windows Ghidra](../windows-ghidra-p0.md). Ghidra supporta anche l'[analisi DOS a 16 bit](../ghidra-dos.md). Per binari di grandi dimensioni, aumenta il timeout di avvio con `REA_GHIDRA_STARTUP_TIMEOUT_MS`. Per la selezione del provider, vedi la [guida CLI](../cli.md#choose-a-provider). Controlla la [disponibilità delle release](../installation.md#released-package-and-main) per le funzionalità aggiunte dall'ultima release npm.
 
 ## Showcase
 
@@ -276,7 +276,7 @@ Segnala vulnerabilità tramite [SECURITY.md](../../SECURITY.md).
 
 ## Cronologia delle stelle
 
-🎉 **250.000 stelle su GitHub — grazie!**
+🎉 **200.000 stelle su GitHub — grazie!**
 
 Grazie a tutti coloro che usano REA, segnalano bug, propongono funzionalità, testano le build e contribuiscono con correzioni.
 

docs/readme/README_ja.md

@@ -166,7 +166,7 @@ REA には Node.js 22.x（>=22.19）、24.x（>=24.11）、または 26+ と npm
 
 <a id="choosing-a-deep-analysis-provider"></a>
 
-対応するネイティブ形式とホストは、プロバイダーによって異なります。[Hopper と Ghidra のセットアップ](../installation.md#hopper)、[IDA ガイド](../ida-provider.md)、[Kuna](../kuna-provider.md)、[Windows 向け Ghidra の実験的対応](../windows-ghidra-p0.md)を参照してください。Ghidra は [16 ビット DOS 分析](../ghidra-dos.md)にも対応しています。プロバイダーの選択は [CLI ガイド](../cli.md#choose-a-provider)を参照してください。最新の npm リリース以降に追加された機能については、[リリースでの利用可否](../installation.md#released-package-and-main)を確認してください。
+対応するネイティブ形式とホストは、プロバイダーによって異なります。[Hopper と Ghidra のセットアップ](../installation.md#hopper)、[IDA ガイド](../ida-provider.md)、[Windows 向け Ghidra の実験的対応](../windows-ghidra-p0.md)を参照してください。Ghidra は [16 ビット DOS 分析](../ghidra-dos.md)にも対応しています。プロバイダーの選択は [CLI ガイド](../cli.md#choose-a-provider)を参照してください。最新の npm リリース以降に追加された機能については、[リリースでの利用可否](../installation.md#released-package-and-main)を確認してください。
 
 ## 事例
 
@@ -274,7 +274,7 @@ npx rea-agents@latest setup
 
 ## スター履歴
 
-🎉 **GitHub スター 250,000 件、ありがとうございます！**
+🎉 **GitHub スター 200,000 件、ありがとうございます！**
 
 REA の利用、バグ報告、機能の要望、ビルドのテスト、修正への貢献に感謝します。
 

docs/readme/README_ko.md

@@ -62,7 +62,7 @@ REA는 에이전트를 분석 도구에 연결해 네이티브 바이너리, Jav
 
 설정 과정은 에이전트에 REA를 등록하고 해당 버전에 맞는 워크플로 지침을 설치합니다. 네이티브 분석에는 기존 Hopper, Ghidra 또는 IDA 설치를 사용할 수 있습니다. 승인하면 설정 과정에서 Hopper를 설치할 수도 있습니다. 정적 JavaScript 분석에는 네이티브 분석 엔진이 필요하지 않습니다.
 
-> <strong>[REA 웹사이트](https://rea.tools/ko/)</strong>에서 설정 방법, 그림으로 설명한 가이드, 실제 사례를 확인하세요.
+> **[REA 웹사이트](https://rea.tools/ko/)**에서 설정 방법, 그림으로 설명한 가이드, 실제 사례를 확인하세요.
 
 ## 빠른 시작
 
@@ -175,7 +175,7 @@ REA에는 Node.js 22.x(>=22.19), 24.x(>=24.11) 또는 26+와 npm이 필요합니
 
 <a id="choosing-a-deep-analysis-provider"></a>
 
-지원하는 네이티브 형식과 호스트는 제공자마다 다릅니다. [Hopper 및 Ghidra 설정](../installation.md#hopper), [IDA 가이드](../ida-provider.md)(선택 사항인 네이티브 MCP 브리지 포함), [Kuna](../kuna-provider.md), [실험적 Windows Ghidra 지원](../windows-ghidra-p0.md)을 참고하세요. Ghidra는 [16비트 DOS 분석](../ghidra-dos.md)도 지원합니다. 큰 바이너리를 분석할 때는 `REA_GHIDRA_STARTUP_TIMEOUT_MS` 또는 `REA_HOPPER_STARTUP_TIMEOUT_MS`로 제공자의 시작 제한 시간을 늘리세요. 제공자 선택은 [CLI 가이드](../cli.md#choose-a-provider)를 참고하세요. 최신 npm 릴리스 이후 추가된 기능은 [릴리스에서의 사용 가능 여부](../installation.md#released-package-and-main)를 확인하세요.
+지원하는 네이티브 형식과 호스트는 제공자마다 다릅니다. [Hopper 및 Ghidra 설정](../installation.md#hopper), [IDA 가이드](../ida-provider.md)(선택 사항인 네이티브 MCP 브리지 포함), [실험적 Windows Ghidra 지원](../windows-ghidra-p0.md)을 참고하세요. Ghidra는 [16비트 DOS 분석](../ghidra-dos.md)도 지원합니다. 큰 바이너리를 분석할 때는 `REA_GHIDRA_STARTUP_TIMEOUT_MS` 또는 `REA_HOPPER_STARTUP_TIMEOUT_MS`로 제공자의 시작 제한 시간을 늘리세요. 제공자 선택은 [CLI 가이드](../cli.md#choose-a-provider)를 참고하세요. 최신 npm 릴리스 이후 추가된 기능은 [릴리스에서의 사용 가능 여부](../installation.md#released-package-and-main)를 확인하세요.
 
 ## 사례
 
@@ -283,7 +283,7 @@ npx rea-agents@latest setup
 
 ## 스타 기록
 
-🎉 **GitHub 스타 250,000개, 감사합니다!**
+🎉 **GitHub 스타 200,000개, 감사합니다!**
 
 REA를 사용하고, 버그를 보고하고, 기능을 요청하고, 빌드를 테스트하고, 수정에 기여해 주신 모든 분께 감사드립니다.
 
@@ -309,10 +309,6 @@ REA에 도움을 보태 주세요! [issue를 등록](https://github.com/morluto/
 
 개발 환경과 검사 항목은 [CONTRIBUTING.md](../../CONTRIBUTING.md), 검증 절차는 [테스트 가이드](../testing.md), 프로젝트 구조는 [아키텍처 지도](../architecture.mermaid)를 참고하세요.
 
-한국어 번역도 개선할 수 있습니다. 이 README를 수정할 때는 [영문 README](../../README.md)의 명령어, 요구 사항, 분석 범위와 일치하는지 확인하세요. 웹사이트 번역은 `website/locales/ko/messages.po`의 `msgstr` 값을 수정하세요.
-
-웹사이트 번역의 수정 방법, 검사 명령, 로컬 미리보기는 `website/locales/README.md`를 따르세요. 위 기여 문서의 **Translation corrections** 절에서 이 가이드로 이동할 수 있습니다. 명령어, 경로, 자리표시자, 기록된 근거는 그대로 보존하세요. `website/_site/`의 한국어 HTML은 자동 생성되므로 직접 수정하지 마세요.
-
 ## 라이선스
 
 [MIT](../../LICENSE)

docs/readme/README_pl.md

@@ -166,7 +166,7 @@ Statyczna analiza JavaScript i .NET odczytuje dostarczone pliki bez uruchamiania
 
 <a id="choosing-a-deep-analysis-provider"></a>
 
-Obsługiwane formaty natywne i platformy zależą od dostawcy analizy. Zobacz [konfigurację Hoppera i Ghidry](../installation.md#hopper), [przewodnik IDA](../ida-provider.md), [Kuna](../kuna-provider.md) oraz [eksperymentalną obsługę Ghidry w systemie Windows](../windows-ghidra-p0.md). Ghidra obsługuje też [analizę 16-bitowego DOS-a](../ghidra-dos.md). Wybór dostawcy opisuje [przewodnik CLI](../cli.md#choose-a-provider). Sprawdź [dostępność w wydaniach](../installation.md#released-package-and-main) dla funkcji dodanych po najnowszym wydaniu npm.
+Obsługiwane formaty natywne i platformy zależą od dostawcy analizy. Zobacz [konfigurację Hoppera i Ghidry](../installation.md#hopper), [przewodnik IDA](../ida-provider.md) oraz [eksperymentalną obsługę Ghidry w systemie Windows](../windows-ghidra-p0.md). Ghidra obsługuje też [analizę 16-bitowego DOS-a](../ghidra-dos.md). Wybór dostawcy opisuje [przewodnik CLI](../cli.md#choose-a-provider). Sprawdź [dostępność w wydaniach](../installation.md#released-package-and-main) dla funkcji dodanych po najnowszym wydaniu npm.
 
 ## Przykłady zastosowań
 
@@ -272,7 +272,7 @@ Zgłaszaj podatności zgodnie z [SECURITY.md](../../SECURITY.md).
 
 ## Historia gwiazdek
 
-🎉 **250 000 gwiazdek na GitHubie — dziękujemy!**
+🎉 **200 000 gwiazdek na GitHubie — dziękujemy!**
 
 Dziękujemy wszystkim, którzy używają REA, zgłaszają błędy, proponują nowe funkcje, testują kompilacje i przesyłają poprawki.
 

docs/readme/README_pt-BR.md

@@ -166,7 +166,7 @@ A inspeção estática de JavaScript e .NET lê os arquivos fornecidos sem execu
 
 <a id="choosing-a-deep-analysis-provider"></a>
 
-Os formatos nativos e os sistemas anfitriões compatíveis variam por provedor. Consulte [configuração do Hopper e Ghidra](../installation.md#hopper), o [guia do IDA](../ida-provider.md), [Kuna](../kuna-provider.md) e o [suporte experimental ao Ghidra no Windows](../windows-ghidra-p0.md). O Ghidra também oferece [análise de DOS de 16 bits](../ghidra-dos.md). Para selecionar um provedor, consulte o [guia da CLI](../cli.md#choose-a-provider). Verifique a [disponibilidade nas versões](../installation.md#released-package-and-main) das funcionalidades adicionadas após a versão mais recente no npm.
+Os formatos nativos e os sistemas anfitriões compatíveis variam por provedor. Consulte [configuração do Hopper e Ghidra](../installation.md#hopper), o [guia do IDA](../ida-provider.md) e o [suporte experimental ao Ghidra no Windows](../windows-ghidra-p0.md). O Ghidra também oferece [análise de DOS de 16 bits](../ghidra-dos.md). Para selecionar um provedor, consulte o [guia da CLI](../cli.md#choose-a-provider). Verifique a [disponibilidade nas versões](../installation.md#released-package-and-main) das funcionalidades adicionadas após a versão mais recente no npm.
 
 ## Casos de uso
 
@@ -272,7 +272,7 @@ Relate vulnerabilidades conforme [SECURITY.md](../../SECURITY.md).
 
 ## Histórico de estrelas
 
-🎉 **250.000 estrelas no GitHub — muito obrigado!**
+🎉 **200.000 estrelas no GitHub — muito obrigado!**
 
 Obrigado a todos que usam o REA, relatam bugs, sugerem funcionalidades, testam builds e contribuem com correções.
 

docs/readme/README_ru.md

@@ -166,7 +166,7 @@ REA требует Node.js 22.x (>=22.19), 24.x (>=24.11) или 26+, а так
 
 <a id="choosing-a-deep-analysis-provider"></a>
 
-Нативные форматы и поддерживаемые системы различаются у разных провайдеров. См. [настройку Hopper и Ghidra](../installation.md#hopper), [руководство по IDA](../ida-provider.md), [Kuna](../kuna-provider.md) и [экспериментальную поддержку Ghidra в Windows](../windows-ghidra-p0.md). Ghidra также поддерживает [анализ 16-битного DOS](../ghidra-dos.md). Выбор провайдера описан в [руководстве по CLI](../cli.md#choose-a-provider). Для функций, добавленных после последней версии в npm, проверьте [доступность в релизах](../installation.md#released-package-and-main).
+Нативные форматы и поддерживаемые системы различаются у разных провайдеров. См. [настройку Hopper и Ghidra](../installation.md#hopper), [руководство по IDA](../ida-provider.md) и [экспериментальную поддержку Ghidra в Windows](../windows-ghidra-p0.md). Ghidra также поддерживает [анализ 16-битного DOS](../ghidra-dos.md). Выбор провайдера описан в [руководстве по CLI](../cli.md#choose-a-provider). Для функций, добавленных после последней версии в npm, проверьте [доступность в релизах](../installation.md#released-package-and-main).
 
 ## Примеры
 
@@ -272,7 +272,7 @@ npx rea-agents@latest setup
 
 ## История звёзд
 
-🎉 **250 000 звёзд на GitHub — спасибо!**
+🎉 **200 000 звёзд на GitHub — спасибо!**
 
 Спасибо всем, кто использует REA, сообщает об ошибках, предлагает новые функции, тестирует сборки и помогает с исправлениями.
 

docs/readme/README_th.md

@@ -166,7 +166,7 @@ REA ต้องใช้ Node.js 22.x (>=22.19), 24.x (>=24.11) หรือ 26
 
 <a id="choosing-a-deep-analysis-provider"></a>
 
-รูปแบบไบนารีเนทีฟและแพลตฟอร์มที่รองรับแตกต่างกันตามผู้ให้บริการวิเคราะห์ ดู[การตั้งค่า Hopper และ Ghidra](../installation.md#hopper), [คู่มือ IDA](../ida-provider.md) [Kuna](../kuna-provider.md) และ[การรองรับ Ghidra บน Windows แบบทดลอง](../windows-ghidra-p0.md) Ghidra ยังรองรับ[การวิเคราะห์ DOS แบบ 16 บิต](../ghidra-dos.md) สำหรับการเลือกผู้ให้บริการ ดู[คู่มือ CLI](../cli.md#choose-a-provider) ตรวจสอบ[ความพร้อมใช้งานในแต่ละรุ่น](../installation.md#released-package-and-main) สำหรับฟีเจอร์ที่เพิ่มหลังรุ่นล่าสุดบน npm
+รูปแบบไบนารีเนทีฟและแพลตฟอร์มที่รองรับแตกต่างกันตามผู้ให้บริการวิเคราะห์ ดู[การตั้งค่า Hopper และ Ghidra](../installation.md#hopper), [คู่มือ IDA](../ida-provider.md) และ[การรองรับ Ghidra บน Windows แบบทดลอง](../windows-ghidra-p0.md) Ghidra ยังรองรับ[การวิเคราะห์ DOS แบบ 16 บิต](../ghidra-dos.md) สำหรับการเลือกผู้ให้บริการ ดู[คู่มือ CLI](../cli.md#choose-a-provider) ตรวจสอบ[ความพร้อมใช้งานในแต่ละรุ่น](../installation.md#released-package-and-main) สำหรับฟีเจอร์ที่เพิ่มหลังรุ่นล่าสุดบน npm
 
 ## ตัวอย่างการใช้งาน
 
@@ -272,7 +272,7 @@ npx rea-agents@latest setup
 
 ## ประวัติดาว
 
-🎉 **250,000 ดาวบน GitHub — ขอบคุณทุกคน!**
+🎉 **200,000 ดาวบน GitHub — ขอบคุณทุกคน!**
 
 ขอบคุณทุกคนที่ใช้ REA รายงานบั๊ก เสนอฟีเจอร์ ทดสอบบิลด์ และช่วยแก้ไข
 

docs/readme/README_tr.md

@@ -171,7 +171,7 @@ Statik JavaScript ve .NET incelemesi, uygulamayı çalıştırmadan sağlanan do
 
 <a id="choosing-a-deep-analysis-provider"></a>
 
-Yerel makine kodu içeren ikili dosya biçimleri ve ana bilgisayar desteği sağlayıcıya göre değişir. [Hopper ve Ghidra kurulumu](../installation.md#hopper), isteğe bağlı native MCP bridge'i de açıklayan [IDA rehberi](../ida-provider.md), [Kuna](../kuna-provider.md) ve [Windows için deneysel Ghidra desteği](../windows-ghidra-p0.md) belgelerine bakın. Ghidra ayrıca [16 bit DOS analizini](../ghidra-dos.md) destekler. Büyük ikili dosyalar için sağlayıcının başlatma zaman aşımını `REA_GHIDRA_STARTUP_TIMEOUT_MS` veya `REA_HOPPER_STARTUP_TIMEOUT_MS` ile artırın. Sağlayıcı seçimi için [CLI rehberine](../cli.md#choose-a-provider) bakın. En son npm sürümünden sonra eklenen özellikler için [sürümlerde kullanılabilirliği](../installation.md#released-package-and-main) kontrol edin.
+Yerel makine kodu içeren ikili dosya biçimleri ve ana bilgisayar desteği sağlayıcıya göre değişir. [Hopper ve Ghidra kurulumu](../installation.md#hopper), isteğe bağlı native MCP bridge'i de açıklayan [IDA rehberi](../ida-provider.md) ve [Windows için deneysel Ghidra desteği](../windows-ghidra-p0.md) belgelerine bakın. Ghidra ayrıca [16 bit DOS analizini](../ghidra-dos.md) destekler. Büyük ikili dosyalar için sağlayıcının başlatma zaman aşımını `REA_GHIDRA_STARTUP_TIMEOUT_MS` veya `REA_HOPPER_STARTUP_TIMEOUT_MS` ile artırın. Sağlayıcı seçimi için [CLI rehberine](../cli.md#choose-a-provider) bakın. En son npm sürümünden sonra eklenen özellikler için [sürümlerde kullanılabilirliği](../installation.md#released-package-and-main) kontrol edin.
 
 ## Örnek çalışmalar
 
@@ -277,7 +277,7 @@ Güvenlik açıklarını [SECURITY.md](../../SECURITY.md) üzerinden bildirin.
 
 ## Yıldız geçmişi
 
-🎉 **GitHub'da 250.000 yıldız — teşekkürler!**
+🎉 **GitHub'da 200.000 yıldız — teşekkürler!**
 
 REA'yı kullanan, hata bildiren, özellik talep eden, derlemeleri test eden ve düzeltmelere katkıda bulunan herkese teşekkürler.
 

docs/readme/README_uk.md

@@ -166,7 +166,7 @@ REA потребує Node.js 22.x (>=22.19), 24.x (>=24.11) або 26+, а та
 
 <a id="choosing-a-deep-analysis-provider"></a>
 
-Нативні формати й підтримка систем відрізняються залежно від провайдера. Дивіться [налаштування Hopper і Ghidra](../installation.md#hopper), [посібник IDA](../ida-provider.md), [Kuna](../kuna-provider.md) та [експериментальну підтримку Ghidra у Windows](../windows-ghidra-p0.md). Ghidra також підтримує [аналіз 16-бітного DOS](../ghidra-dos.md). Для вибору провайдера дивіться [посібник CLI](../cli.md#choose-a-provider). Для функцій, доданих після найновішої версії в npm, перевірте [доступність у випусках](../installation.md#released-package-and-main).
+Нативні формати й підтримка систем відрізняються залежно від провайдера. Дивіться [налаштування Hopper і Ghidra](../installation.md#hopper), [посібник IDA](../ida-provider.md) та [експериментальну підтримку Ghidra у Windows](../windows-ghidra-p0.md). Ghidra також підтримує [аналіз 16-бітного DOS](../ghidra-dos.md). Для вибору провайдера дивіться [посібник CLI](../cli.md#choose-a-provider). Для функцій, доданих після найновішої версії в npm, перевірте [доступність у випусках](../installation.md#released-package-and-main).
 
 ## Приклади
 
@@ -272,7 +272,7 @@ npx rea-agents@latest setup
 
 ## Історія зірок
 
-🎉 **250 000 зірок на GitHub — дякуємо!**
+🎉 **200 000 зірок на GitHub — дякуємо!**
 
 Дякуємо всім, хто використовує REA, повідомляє про помилки, пропонує нові функції, тестує збірки й допомагає з виправленнями.
 

docs/readme/README_vi.md

@@ -166,7 +166,7 @@ Kiểm tra tĩnh JavaScript và .NET đọc các tệp được cung cấp mà k
 
 <a id="choosing-a-deep-analysis-provider"></a>
 
-Định dạng mã máy và nền tảng chạy REA được hỗ trợ khác nhau tùy trình phân tích. Xem [thiết lập Hopper và Ghidra](../installation.md#hopper), [hướng dẫn IDA](../ida-provider.md), [Kuna](../kuna-provider.md) và [hỗ trợ Ghidra thử nghiệm trên Windows](../windows-ghidra-p0.md). Ghidra cũng hỗ trợ [phân tích DOS 16 bit](../ghidra-dos.md). Để chọn trình phân tích, xem [hướng dẫn CLI](../cli.md#choose-a-provider). Kiểm tra [khả năng sử dụng theo bản phát hành](../installation.md#released-package-and-main) đối với tính năng được bổ sung sau phiên bản npm mới nhất.
+Định dạng mã máy và nền tảng chạy REA được hỗ trợ khác nhau tùy trình phân tích. Xem [thiết lập Hopper và Ghidra](../installation.md#hopper), [hướng dẫn IDA](../ida-provider.md) và [hỗ trợ Ghidra thử nghiệm trên Windows](../windows-ghidra-p0.md). Ghidra cũng hỗ trợ [phân tích DOS 16 bit](../ghidra-dos.md). Để chọn trình phân tích, xem [hướng dẫn CLI](../cli.md#choose-a-provider). Kiểm tra [khả năng sử dụng theo bản phát hành](../installation.md#released-package-and-main) đối với tính năng được bổ sung sau phiên bản npm mới nhất.
 
 ## Các nghiên cứu điển hình
 
@@ -272,7 +272,7 @@ Báo cáo lỗ hổng theo [SECURITY.md](../../SECURITY.md).
 
 ## Lịch sử sao
 
-🎉 **250.000 sao trên GitHub — xin cảm ơn!**
+🎉 **200.000 sao trên GitHub — xin cảm ơn!**
 
 Cảm ơn mọi người đã sử dụng REA, báo lỗi, đề xuất tính năng, kiểm thử bản dựng và đóng góp bản sửa lỗi.
 

docs/readme/README_zh-TW.md

@@ -170,7 +170,7 @@ REA 需要 Node.js 22.x（>=22.19）、24.x（>=24.11）或 26+，以及 npm。
 
 <a id="choosing-a-deep-analysis-provider"></a>
 
-不同提供者支援的原生格式和主機系統有所不同。請參閱 [Hopper 與 Ghidra 設定](../installation.md#hopper)、[IDA 指南](../ida-provider.md)、[Kuna](../kuna-provider.md)和[實驗性 Windows Ghidra 支援](../windows-ghidra-p0.md)。Ghidra 也支援 [16 位 DOS 分析](../ghidra-dos.md)。提供者選擇見 [CLI 指南](../cli.md#choose-a-provider)。對於最新 npm 版本發佈後新增的功能，請查看[發佈可用性](../installation.md#released-package-and-main)。
+不同提供者支援的原生格式和主機系統有所不同。請參閱 [Hopper 與 Ghidra 設定](../installation.md#hopper)、[IDA 指南](../ida-provider.md)和[實驗性 Windows Ghidra 支援](../windows-ghidra-p0.md)。Ghidra 也支援 [16 位 DOS 分析](../ghidra-dos.md)。提供者選擇見 [CLI 指南](../cli.md#choose-a-provider)。對於最新 npm 版本發佈後新增的功能，請查看[發佈可用性](../installation.md#released-package-and-main)。
 
 ## 案例
 
@@ -278,7 +278,7 @@ npx rea-agents@latest setup
 
 ## Star 歷史
 
-🎉 **GitHub Star 達到 250,000 個，感謝大家！**
+🎉 **GitHub Star 達到 200,000 個，感謝大家！**
 
 感謝每一位使用 REA、報告錯誤、提出功能需求、測試建置和貢獻修復的朋友。
 

docs/readme/README_zh.md

@@ -170,7 +170,7 @@ REA 需要 Node.js 22.x（>=22.19）、24.x（>=24.11）或 26+，以及 npm。
 
 <a id="choosing-a-deep-analysis-provider"></a>
 
-不同提供方支持的原生格式和主机系统有所不同。请参阅 [Hopper 与 Ghidra 设置](../installation.md#hopper)、[IDA 指南](../ida-provider.md)、[Kuna](../kuna-provider.md)和[实验性 Windows Ghidra 支持](../windows-ghidra-p0.md)。Ghidra 也支持 [16 位 DOS 分析](../ghidra-dos.md)。提供方选择见 [CLI 指南](../cli.md#choose-a-provider)。对于最新 npm 版本发布后新增的功能，请查看[发布可用性](../installation.md#released-package-and-main)。
+不同提供方支持的原生格式和主机系统有所不同。请参阅 [Hopper 与 Ghidra 设置](../installation.md#hopper)、[IDA 指南](../ida-provider.md)和[实验性 Windows Ghidra 支持](../windows-ghidra-p0.md)。Ghidra 也支持 [16 位 DOS 分析](../ghidra-dos.md)。提供方选择见 [CLI 指南](../cli.md#choose-a-provider)。对于最新 npm 版本发布后新增的功能，请查看[发布可用性](../installation.md#released-package-and-main)。
 
 ## 案例
 
@@ -278,7 +278,7 @@ npx rea-agents@latest setup
 
 ## Star 历史
 
-🎉 **GitHub Star 达到 250,000 个，感谢大家！**
+🎉 **GitHub Star 达到 200,000 个，感谢大家！**
 
 感谢每一位使用 REA、报告错误、提出功能需求、测试构建和贡献修复的朋友。
 

docs/reconstruction-coverage.md

@@ -1,43 +0,0 @@
-# Reconstruction coverage
-
-`rea evaluate-reconstruction-coverage coverage.json --json` evaluates an inline
-coverage workspace and its selected `boundary_id`. MCP exposes the same input
-through `evaluate_reconstruction_coverage`. Results contain a status, reasons,
-recommended probes and Evidence references; the supplied bundle retains the
-complete records.
-
-Evidence IDs and bundle manifests must authenticate before evaluation. A valid
-record can still be insufficient proof: a passing verifier summary cannot
-promote inferred Evidence into a replay observation. That case returns
-`unknown`, while a missing or tampered record remains an input error.
-
-## Comparable verifier Evidence
-
-At least one record explicitly cited by the latest verifier observation must
-support the declared contract authority:
-
-| Contract authority  | Evidence source                           | Confidence              |
-| ------------------- | ----------------------------------------- | ----------------------- |
-| `shipped-artifact`  | `shipped-artifact`                        | `observed` or `derived` |
-| `controlled-replay` | `controlled-replay`                       | `observed`              |
-| `live-observation`  | `controlled-replay` or `external-service` | `observed`              |
-| `external`          | `external-service`                        | `observed`              |
-
-Contextual references can accompany qualifying proof. An unrelated observed
-record elsewhere in the bundle cannot repair a result that cites only
-inference. Older observed results cannot replace the newest weak result.
-Equivalent observations at the same instant can share qualifying proof from
-one of those observations; conflicting tied assessments remain unknown.
-
-## Package and integration proof
-
-Build, clean-install and runtime-routing claims require observed runtime
-Evidence (`controlled-replay` or `external-service`). Package-content and
-authority-independence audits can also use observed or derived
-`shipped-artifact` Evidence. Each proof must cite its qualifying records and
-cover the selected boundary's artifact digests. An inference alone establishes
-neither a passing nor a failed package workflow.
-
-The evaluator preserves Evidence provenance and returns an actionable unknown
-when qualification is unavailable. It does not change the cited records to
-make their authority match a caller's declaration.

docs/reconstruction-obligation-ledgers.md

@@ -323,6 +323,3 @@ disposition but does not silently count it as verified.
 The tool returns every obligation inline. Its `ledger_id` and `closure_digest`
 identify the complete result, including summaries, reports, ownership and
 dependency graphs, Evidence links, and limitations.
-
-For named boundaries with explicit verifier contracts and package-proof kinds,
-see [reconstruction coverage](reconstruction-coverage.md).

docs/reverse-engineering-tools.md

@@ -16,12 +16,11 @@ can run.
 
 `inspect_with_objdump` and `rea inspect-with-objdump` capture stdout and stderr as inline Evidence. Artifact inspection Evidence records SHA-256 digests before and after the provider call and whether those observed digests differ; this cannot prove the exact bytes consumed if the artifact changes during execution. Choose one artifact operation: `file_headers`, `section_headers`, `symbols`, `relocations`, `dwarf`, `disassemble`, or `disassemble_all`. `disassemble` maps to `-d`; `disassemble_all` maps to `-D` and has different symbol-boundary semantics. The pathless `inspect_with_objdump {"operation":"architectures"}` MCP call or `rea list-objdump-architectures` CLI command maps to `-i` and produces subjectless provider-capability Evidence describing BFD targets compiled into the installed binary, not a guarantee that a target is supported.
 
-For DWARF, REA does not follow local debug links by default. Set `follow_debug_links` to `true` to pass `-WK`; external debug-file identities are not bound to Evidence when following links is enabled. The CLI flag is `--follow-debug-links`; `--no-follow-debug-links` or `--follow-debug-links=false` keeps the default. A separate `true` or `false` word after the flag is not its value. REA clears `DEBUGINFOD_URLS` in the objdump child environment to disable debuginfod network access on GNU binutils versions that do not support `-WE`. The complete raw output is authoritative; REA does not normalize it into a version-independent disassembly schema.
+For DWARF, REA does not follow local debug links by default. Set `follow_debug_links` to `true` to pass `-WK`; external debug-file identities are not bound to Evidence when following links is enabled. The CLI option is `--follow-debug-links true`. REA clears `DEBUGINFOD_URLS` in the objdump child environment to disable debuginfod network access on GNU binutils versions that do not support `-WE`. The complete raw output is authoritative; REA does not normalize it into a version-independent disassembly schema.
 
 ```sh
 rea inspect-with-objdump ./program disassemble
-rea inspect-with-objdump ./program dwarf
-rea inspect-with-objdump ./program dwarf --follow-debug-links
+rea inspect-with-objdump ./program dwarf --follow-debug-links false
 ```
 
 Captured stdout and stderr are retained up to a 16 MiB combined limit; `output_truncated` marks output beyond that limit.
@@ -73,12 +72,7 @@ invocation. A signed status response also confirms completion of older bridge
 connections after its UI dispatch, preserving recovery proof for a caller whose
 receipt another caller has acknowledged. Neither receipt recovery nor a status
 probe retries the original command. Failed acknowledgements remain pending and
-block new commands until they can be retried successfully. Status proof failures
-identify `cutter_command` and retain `status` in
-`details.diagnostics.auxiliary_operation`; malformed proof still blocks dispatch.
-Descriptor failures likewise retain the requesting operation through cleanup.
-Command admission reports typed cancellation and treats the caller's abort reason
-as opaque metadata, without inferring cleanup ownership from it.
+block new commands until they can be retried successfully.
 
 ## Configuration and coverage
 

docs/sqlite-databases.md

@@ -105,20 +105,6 @@ overall native heap and total resident memory are not capped. Row limits do not
 override these byte and resource limits. Resource-limit failures do not return
 an incomplete schema as successful complete evidence.
 
-If the combined database and WAL exceed the snapshot budget, the refusal is a
-`resource_constraint` and reports both the configured byte limit and the exact
-observed combined size as a decimal string. The remediation directs callers to
-create a smaller consistent offline snapshot containing only relevant data
-through the application's supported export workflow. A generic backup or copy
-does not guarantee a smaller result; REA does not truncate or modify the
-selected source.
-
-On hosts that cannot address the derived WAL or rollback-journal path for a
-long selected database name, REA reports that the SQLite capability is
-unavailable. It does not assume an inaccessible sidecar is absent. Use the
-application's supported consistent offline export or copy workflow to place
-the complete known file set at a shorter path.
-
 MCP also applies its configured response budget to the complete Evidence
 envelope. If delivery exceeds that budget, it reports a transport constraint
 with guidance for exporting retained Evidence, requesting a matching larger

docs/testing.md

@@ -199,100 +199,6 @@ Measure slow cases before pruning capacity coverage. Retain inputs beyond the
 formerly failing size/depth and distinguish cold runs, warm builds, coverage,
 and toolchain conditions when comparing timings.
 
-## Lifecycle regressions
-
-For changes to resource acquisition, readiness, cancellation, or cleanup, select
-the affected owners and applicable scenarios below. Include temporary snapshots
-and one-shot commands. Use public CLI/MCP workflows where practical and a
-controlled production seam for interleavings that cannot be reproduced reliably.
-
-| Scenario                                                                                | Assertion and control                                                                                                                                                                                                          |
-| --------------------------------------------------------------------------------------- | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
-| Target admitted; startup still pending                                                  | Status preserves the readiness distinction and observed startup activity; readiness requires the provider's documented proof.                                                                                                  |
-| First handshake is late, absent, invalid, or recovered during close                     | Initial and recovery paths retain the same authenticated identity facts. Foreign run/token controls cannot authorize cleanup; authenticated idle/native work survives the unauthenticated listener deadline.                   |
-| Launch returns an error with a valid process handle                                     | Cover already-exited and still-live owned processes. Verify observed exit separately from creation; failed termination or unavailable identity remains unresolved.                                                             |
-| Cancellation arrives after workload exit, during result reads or temporary-root removal | Return typed cancellation with available partial observations and actual cleanup status. The non-aborted control succeeds; existing primary/cleanup failures keep their precedence.                                            |
-| Children have mixed health or cleanup outcomes                                          | Missing peer health does not erase an observed failure or activity. Idle plus unknown stays unknown. Retry a failed child without closing a successful peer again, including after a close-option change.                      |
-| Cleanup fails after success or primary failure                                          | Public output retains the completed observation or primary diagnostic, remaining resources, and owner recovery action. Restore the denied resource and verify the owning cleanup retry.                                        |
-| Target exits without an acknowledgement, or transport disappears while it stays alive   | Positive owned exit proof resolves target lifetime; other resources still need cleanup. Lost transport alone does not prove exit. Verify unrelated/attached targets survive and same-connection recovery works when supported. |
-
-Synchronize cancellation with the finalization boundary being tested; a fixed
-delay after dispatch does not establish that phase. Use markers, barriers, or
-owned cleanup seams while preserving real cleanup where feasible. Check server
-settlement and retained resources even if the MCP SDK rejects the client promise
-before the handler finishes. A cancellation during active execution does not
-cover cancellation during final cleanup.
-Use explicit abort reasons and assert their identity at admission and after
-provider completion, alongside retained observations and cleanup state.
-
-For atomic writes, exercise cancellation on both sides of the documented commit
-point and preserve any publication receipt. A late interruption does not prove
-that no output was published.
-
-For successful provider reports, test cancellation immediately before the report
-reaches the application workflow as well as during provider cleanup. Validate
-the report before classifying completion: a valid report must retain its Evidence
-on cancellation, and an invalid report must keep its output error. Exercise both
-the provider boundary and the shared CLI/MCP workflow; a downstream guard does
-not repair the provider's own completion contract. When callers share startup,
-cancel each waiter independently and verify that the last departure awaits owned
-cleanup while interested peers can still reach readiness. Repeat the same
-shutdown event after a cleanup failure to verify that its listener can retry.
-Exercise non-default lifecycle deadlines through queued requests and their
-consumers; default-only controls cannot detect dropped request options.
-
-For descriptor-backed reads, inject a close failure after a successful read and
-after a primary read or cancellation failure. Verify that the exact descriptor
-remains owned, both failures survive, and a later close retries it. Repeat
-admission attempts while close still fails: no additional descriptor or
-native command should start. Restore close and verify that the exact owner
-resolves the originating cleanup marker and allows later work, while the earlier
-failure remains available as a diagnostic. Retain errors returned by multiple
-failed retries, including admission and shutdown aggregates, and assert that
-each becomes complete after recovery. For an aggregate with multiple owners,
-release one owner while another still fails and assert that it remains incomplete.
-Cover recovery before the
-caller-specific error is bound to its retained owner, as
-another request can retry cleanup concurrently. Confirm that an already released
-owner resolves a later binding too. Include
-admission failure after opening the descriptor. If caller cancellation returns
-before an inspection settles, gate its final read or close and verify that
-session shutdown waits for the owned work and reports any retained resources.
-Gate a later read in a multi-read inspection, not only its first read. Overlap
-operations so one retains a failed descriptor while another reaches its next
-read; both the operation and shutdown must settle without nested-admission
-deadlock. Deny child close and verify its containing root survives until retry.
-
-Exercise publication on filesystems without hard links using an unsupported-link
-seam. Check exclusive destination creation, stat/write/close failures, completed
-output receipts, and cancellation at the documented cutoff. A streamed fallback
-has different visibility from an atomic hard-link commit and must report it
-accurately. For Windows command supervision, keep a descendant writing after its
-leader exits, deny cleanup observation, and verify a competing writer remains
-excluded until the exact Job Object closes. Portable doubles cover retry logic;
-the native Windows lane must establish actual process-tree behavior.
-
-Supervisor tests must observe process exit, output-pipe closure, and IPC
-disconnection separately. In the pinned Node runtime, a parent-initiated IPC
-disconnect can omit the aggregate `ChildProcess` close event. Join the actual
-resource observations before reporting completion; process exit alone does not
-establish pipe or process-tree release.
-
-When changing an internal helper contract, check its JavaScript verifier and
-subprocess-script consumers alongside TypeScript references. Source typecheck
-does not check those calls; run their orchestration tests against the built
-modules, including the verifier's failure and cleanup paths.
-
-Representative regressions include
-[process cleanup-time SIGINT](https://github.com/morluto/rea/blob/e78455338fe2d06c4cd03d59cbf33473d754998b/tests/boundary/process/processCaptureCancellationAdapters.test.ts),
-[late authenticated cleanup](https://github.com/morluto/rea/blob/e78455338fe2d06c4cd03d59cbf33473d754998b/tests/boundary/providers/hopper/hopperClient.handshakeRecovery.test.ts),
-[LLDB launch and finalization](https://github.com/morluto/rea/blob/e78455338fe2d06c4cd03d59cbf33473d754998b/tests/boundary/providers/native/lldbCallTracerFailures.test.ts),
-[composed child ownership](https://github.com/morluto/rea/blob/e78455338fe2d06c4cd03d59cbf33473d754998b/src/application/binary/CompositeProvider.test.ts),
-and [public CLI cleanup denial](https://github.com/morluto/rea/blob/e78455338fe2d06c4cd03d59cbf33473d754998b/tests/boundary/cli/wasmCleanupCli.test.ts).
-These controlled probes do not replace the matching real-provider lane. Record
-the base failure, passing control, exact host/provider, verified cleanup, and
-unavailable coverage; a missing engine is not a pass.
-
 ## Behavioral depths
 
 | Depth        | Location                | What it proves                                                                                        |
@@ -911,38 +817,6 @@ Native IDA MCP verification uses `"protocol": "native"` with an already-running
 
 The initial Linux x64 IDA Free 9.4 run used native MCP 1.1.2 with a local navigation correction. Windows x64 verification uses **IDA Pro 9.3**, the two-function public fixture, and the shipped Windows `whoami.exe` application. The native plugin was built from upstream `c9d15d98e8a143fc74f6e14037c48f63889b6d6c`, including the merged navigation fix, with a local loopback-listener change. Production CLI/MCP parity, switching, identity and cleanup passed. Correctness and performance measurements are recorded in the [Windows native verification notes](https://github.com/morluto/rea/blob/main/experiments/analysis-efficiency/ida-native-windows.md). Stock 1.1.2 switching, native macOS, and Windows IDA Free remain unverified. See the [native bridge prerequisites](ida-provider.md#optional-native-ida-mcp-bridge).
 
-## Kuna lane
-
-`npm run verify:kuna` requires a caller-supplied `kuna` in `REA_KUNA_COMMAND`
-and a host C compiler (`REA_CC`, default `cc`) with `strip` and `nm`. It builds a
-source-owned fixture with non-inlined calls, with symbols and stripped, then verifies through MCP that
-callers, callees and exact incoming xrefs agree with those calls, graph/path
-composition reaches the callee, reference-only queries leave project/staging
-entries unchanged, repeated relationships reuse the graph, and
-the first cold pseudocode answer comes from a single-function run or an export
-that already finished, assembly waits for and serves from that export, and
-pseudocode and both dossier facets match their recorded file spans and digests,
-a fresh server reuses the export without rebuilding it, staging is empty after
-a completed export, and no owned process survives. Pass
-`--targets DIR --functions a,b` to add caller-built binaries laid out as
-`DIR/<flavor>/<name>` beside `<name>.stripped`; addresses come from the
-symbol-bearing build. `--compare-ghidra` with `GHIDRA_INSTALL_DIR` runs those
-caller-built functions through Ghidra (it refuses to run without `--targets` and
-`--functions`, an empty matrix, or names missing from every supplied target) and
-reports latency, sampled process-tree CPU and peak memory, UTF-8 response size,
-and goto and warning-marker counts. Those counts are not a correctness judgement,
-and model tokens are not measured. Reference timings and response sizes are
-reported separately; reference caches expire when the server closes. `--report PATH` writes the JSON report.
-
-The first matrix run used Kuna 1.833 and Ghidra 12.1.4 with JDK 21 on macOS
-arm64. It covered zlib 1.3.2 `minigzip`, coreutils 9.9 `sort` and the sqlite
-3.54.0 shell, built at `-O2` for ELF x86-64, ELF AArch64, Mach-O arm64 and
-Mach-O x86-64, each with symbols and stripped. A separate Linux x86-64 run verified
-the fixture and system zlib 1.2.13 / SQLite 3.40.1 libraries through MCP, including
-cached byte spans and a Ghidra comparison. See the [Linux report](https://github.com/morluto/rea/pull/3854#issuecomment-6185870391)
-for measured scope and limitations. Windows, PE and universal Mach-O remain
-unverified by this lane.
-
 ## DOS Ghidra analysis
 
 `npm run verify:ghidra:dos` requires the supported Ghidra and JDK installation
@@ -976,16 +850,6 @@ and runtime cleanup. Windows additionally requires the matching native addon;
 its verifier lineage remains explicitly unavailable outside the provider's
 retained Job Object, as in the other Windows lanes.
 
-`npm run verify:ghidra:m68k` needs no assembler: its 22-byte big-endian 68000
-fixture is source-owned annotated hex in the verifier, loaded at `0x1000`. With
-an installed Ghidra 12.1.4 and full JDK on Linux or macOS, it verifies the
-`68000:BE:32:default` BinaryLoader import, real CLI/stdio MCP load-image parity,
-exact source bytes, both functions, the `bsr.b` call reference, decompilation
-through address and file offset, rejection of a misaligned entry and of a mapping
-past `0xffffffff` without replacing the active session, and runtime cleanup.
-Windows Ghidra P0 does not admit m68k, so this is not a Windows lane. The lane
-has been run on macOS; Linux has not been exercised.
-
 `npm run verify:ghidra:raw` uses a generated ARM little-endian headerless image
 through the compiled CLI and stdio MCP server. With the same Ghidra/JDK
 prerequisites, it checks preparation and bridge startup, verified load mappings,
@@ -1093,19 +957,7 @@ the Apple or Windows curated lanes invoke explicitly, which also select that
 lane. Edits to verifier entrypoints run only by manual, licensed or self-hosted
 workflows run static checks and the Linux suite. Website changes run website
 checks. Provider workflow changes validate the workflow and run that provider's
-verifier. Changes under `bridge/ghidra/` also select the `ghidra_bridge` lane,
-which compiles the packaged bridge sources against the pinned Ghidra 12.1.4
-jars with `npm run verify:ghidra:bridge-sources`. It never launches Ghidra or
-imports a target, so a missing import fails the PR instead of every Ghidra
-session. The launcher, compiler and package checks share named required source
-roles. The manifest must match the complete Java cohort, so deleting a helper
-or adding an unregistered dependency cannot silently change the shipped set.
-The preflight reuses the provider's Java Properties parser with the pinned Node
-toolchain's native type stripping, without an npm install or runtime build.
-The shared release policy owns the verified version and JDK major. CI checks
-the archive pin before downloading and verifies the extracted SDK version;
-changes to these source owners also select the compile lane.
-Manual-provider/Android workflow changes run workflow validation only.
+verifier. Manual-provider/Android workflow changes run workflow validation only.
 The four-version SQLite compatibility matrix has its own `sqlite` scope for
 SQLite implementation, contracts, CLI/MCP registration, fixtures, and shared
 runtime boundaries. SQLite and server-lifecycle test edits and the SQLite npm

docs/tool-design.md

@@ -68,93 +68,6 @@ satisfy. A plan without execution does not establish runtime behavior.
   constraints. Report pagination, truncation, cancellation, and partial failure.
   An assumed agent budget is insufficient justification for a limit.
 
-## Own the lifecycle
-
-For tools that acquire resources, identify the owner and the observations that
-establish each transition. Include temporary files and one-shot commands, as
-well as persistent engine sessions. Use the existing provider contracts;
-providers need not expose identical state machines.
-
-- Keep target admission, provider readiness, active work, observed process exit,
-  and resource release separate. A valid process handle, successful launcher,
-  or selected target establishes only its own fact. Publish available identity
-  and exit observations even when launch fails; retain unknown ownership.
-- Authenticate and capture identity through the same boundary on initial and
-  recovery handshakes. Bound abandoned unauthenticated listeners where the
-  protocol permits it; that deadline must not expire authenticated idle sessions
-  or long-running native work. Listener expiry does not prove target closure.
-- Readiness observations may await owned prerequisite commands. Status must
-  remain readable during owner finalization without starting replacement work;
-  report readiness as unknown when it cannot be re-observed.
-- Shared startup has one producer and independently cancellable caller waits.
-  Keep it running while any caller still needs it. The final departing caller
-  waits for owned cleanup and retains its failure. Provider closure is distinct
-  from caller cancellation. Retained cleanup capabilities block replacement;
-  derive readiness from the current startup's completion and live connection.
-- For cancellable observations, carry cancellation through result consumption
-  and awaited cleanup. Before returning success, check the signal after the
-  last awaited finalization step.
-  Retain collected observations under typed cancellation. Preserve an existing
-  primary failure and let incomplete cleanup retain its own classification.
-  Preserve the caller's abort reason as the typed cancellation error's cause,
-  including when cancellation is observed only after provider completion.
-  Shared command owners must retain the observed cancellation reason separately
-  from physical failures and cleanup ownership. Carry that fact through failure
-  wrapping so adapters can preserve the exact reason without interpreting it.
-  Client cancellation alone does not prove native work stopped.
-  For atomic publication, document the cancellation cutoff and preserve any
-  committed output's publication receipt.
-  Queued and retried work must retain the complete accepted execution controls,
-  including non-default lifecycle deadlines and cancellation signals.
-- Release only owned resources. Attaching owns a connection or session unless
-  the provider contract explicitly establishes target ownership. A helper exit,
-  missing reply, or missing PID does not establish target exit.
-- Retain successful child cleanup and retry only unresolved children, including
-  when close options change. Preserve observed child failure or activity when
-  another child's health is unavailable; idle plus missing coverage stays
-  unknown.
-  Bind cleanup failures to their exact resource owner. Resolve current cleanup
-  uncertainty only after that owner confirms release, while preserving the
-  original failure and completed observations. Later failure composition must
-  report only resources whose cleanup remains unresolved. Carry cleanup
-  capabilities explicitly in typed outcomes so consumers can bind returned errors
-  to exact owners without reparsing diagnostic cause chains.
-  Bind every caller-visible retry error and aggregate, including an error already
-  produced by the provider. An aggregate remains incomplete until all owners it
-  reports are released; releasing one child cannot clear another child's status.
-- Await one-shot cleanup without discarding the completed result or primary
-  diagnostic. Preserve partial observations, remaining resources, and the cleanup
-  owner's recovery instructions. CLI adapters should reuse
-  [`finishAnalysisCommand`](https://github.com/morluto/rea/blob/main/src/cli/finishAnalysisCommand.ts) where its contract
-  applies rather than duplicate close/finally handling.
-- Give descriptor-backed reads an owner before opening the file. A rejected
-  close must retain the exact handle and preserve any earlier failure. If an
-  abortable caller stops waiting, keep the underlying work in that owner's
-  lifetime so shutdown cannot report release before finalization settles.
-  Admit the entire inspection once, including later reads and finalization.
-  Helpers must borrow that admission or use an operation child scope; re-entering
-  the same draining scope can make cleanup wait for its own caller.
-  Retry retained cleanup before admitting new work and keep admission blocked
-  while it remains unresolved. Link the originating cleanup error to its exact
-  owner so confirmed release resolves its cleanup marker while preserving the
-  earlier diagnostic. Shared CLI/MCP adapters cannot infer that confirmation.
-- Provider profile selection owns every asynchronous candidate through its
-  terminal result and finalization. The registry owns profile-file cleanup,
-  joins all automatic-selection children, and closes those file owners before
-  reporting candidate shutdown. Final caller cancellation joins the selection;
-  an adapter that ignores cancellation remains active and owned until it settles.
-  Block new admission during shutdown and while cleanup remains unresolved;
-  reopen after confirmed retry. Preserve failed results before considering a
-  later signal, and retain every child's attributed cleanup in mixed outcomes.
-- Release child descriptors before removing their containing root. Retain a
-  composite owner when either stage fails so retry preserves that ordering.
-  A Windows command leader's exit does not establish Job Object closure. Keep
-  the process-tree observer and command lock alive through failed cleanup retries
-  until the owned tree's close event.
-
-Exercise the applicable [lifecycle regression scenarios](testing.md#lifecycle-regressions)
-through the producing owner and affected CLI/MCP consumers.
-
 ## Implement and evaluate
 
 Put provider protocols/parsing in adapters and shared CLI/MCP workflows in the

docs/user-visible-errors.csv

@@ -43,7 +43,7 @@ harm_rank,location,trigger,current_copy,user_risk,proposed_replacement,implement
 31,src/application/ReferenceSourceImportTypes.ts:limit,Import reports terminal limit failure,No reachable constructor found,Declared state may be unreachable; false verification risk,Remove unreachable top-level limit variant; per-entry limit guidance remains caller-visible.,removed,"verified by typecheck, exhaustive projection test, and source search"
 32,src/application/Setup.ts:configureDetectedClients(backup),Agent configuration backup fails,"{clientName} configuration backup verification failed; no successful configuration was reported.",Exposes machine client key and obscures no-write guarantee,"Agent configuration could not be backed up, so no change was made. Check file permissions, then rerun setup.",implemented,focused assertions passed
 33,src/application/Setup.ts:configureDetectedClients(write),Agent configuration write fails,"{clientName} configuration write verification failed; no successful configuration was reported.",Exposes machine client key and gives no recovery,"Agent configuration could not be updated. Check file permissions, then rerun setup.",implemented,focused assertions passed
-34,src/application/Setup.ts:configureDetectedClients(readback),Written agent configuration cannot be verified,"{clientName} configuration readback verification failed; no successful configuration was reported.",Exposes machine client key and omits backup recovery,"Agent configuration could not be verified after writing. The original was restored and its backup at {backupPath} was retained. Repair the configuration file or restore that backup, then rerun setup. Without a backup: Agent configuration could not be verified. Repair the configuration file, then rerun setup.",implemented,focused assertions passed
+34,src/application/Setup.ts:configureDetectedClients(readback),Written agent configuration cannot be verified,"{clientName} configuration readback verification failed; no successful configuration was reported.",Exposes machine client key and omits backup recovery,"Agent configuration could not be verified after writing. Repair the configuration file or restore its `.rea.backup`, then rerun setup.",implemented,focused assertions passed
 35,src/application/Setup.ts:installSkill,Skill install or semantic readback fails,Agent skill installation or readback failed.,No useful recovery action,"REA analysis skill could not be installed or verified. Check permissions for `~/.agents/skills`, then rerun setup.",implemented,focused assertions passed
 36,src/main.ts:serveStdio.onerror,Established MCP client connection reports an error,MCP stdio transport error,Exposes transport implementation and gives no recovery,REA lost its MCP client connection. Restart REA from your MCP client.,implemented,verified by injected transport onerror runtime test
 37,src/main.ts:serveStdio throw,MCP connection cannot be created,Failed to start MCP stdio transport,Exposes transport implementation and gives no recovery,REA could not start its MCP connection. Restart REA from your MCP client; run `rea doctor` if it fails again.,implemented,verified by injected transport startup-throw runtime test
@@ -55,7 +55,7 @@ harm_rank,location,trigger,current_copy,user_risk,proposed_replacement,implement
 43,src/application/Uninstall.ts:removeClient parse,Agent configuration is malformed,Malformed configuration was preserved without mutation.,Does not name required repair format or retry,"Configuration is not valid JSON/TOML and was not changed. Repair it, then rerun uninstall.",implemented,focused JSON assertion passed; TOML path uses same branch
 44,src/application/Uninstall.ts:removeClient backup,Configuration backup copy fails,Configuration backup failed; no mutation was attempted.,No recovery step,"Configuration could not be backed up, so no change was made. Check file permissions, then rerun uninstall.",implemented,verified by injected filesystem backup failure test
 45,src/application/Uninstall.ts:removeClient update,Write or semantic readback fails,Configuration update failed; the original was restored and {backupPath} was retained.,Exposes local path and lacks clear next sequence,"Report whether the original was restored; if restoration also fails, direct the user to the retained backup.",implemented,verified by injected update and restoration failure tests
-45.5,src/application/Uninstall.ts:removeClient restore,Configuration update fails and restoring the original also fails,"Configuration could not be updated or restored. Restore the backup at {backupPath} manually, then rerun uninstall.","High risk; persistent configuration may be damaged, but retained backup is authoritative",Keep new recovery copy,implemented,verified by injected restoration failure test
+45.5,src/application/Uninstall.ts:removeClient restore,Configuration update fails and restoring the original also fails,"Configuration could not be updated or restored. Restore its `.rea.backup` manually, then rerun uninstall.","High risk; persistent configuration may be damaged, but retained backup is authoritative",Keep new recovery copy,implemented,verified by injected restoration failure test
 46,src/application/Uninstall.ts:removeManagedPath symlink,Managed cache/state/skill path is a symbolic link,Refused to follow symlink {path}.,Exposes local path and does not explain manual safety check,"REA did not remove this item because its managed path is a symbolic link. Verify the link target before removing it manually.",implemented,focused assertion passed
 47,src/application/Uninstall.ts:removeManagedPath failure,Managed item removal fails,{path} could not be removed.,Exposes local path and gives no recovery,"This item could not be removed. Check file permissions, then rerun uninstall.",implemented,verified by injected managed-path removal failure test
 48,src/application/DoctorDiagnostics.ts:node,Runtime version is outside supported ranges,"Install Node.js 22.x (>=22.19), 24.x (>=24.11), or 26+.",Low risk; exact dependency recovery,Keep current copy,unchanged,verified by doctor unit test

docs/verification/electron-cancellation-2026-10-16.md

@@ -1,158 +0,0 @@
-# Electron cancellation verification, 2026-10-16
-
-[#4388](https://github.com/morluto/rea/issues/4388), existing
-[#4387](https://github.com/morluto/rea/pull/4387), umbrella
-[#4027](https://github.com/morluto/rea/issues/4027).
-
-The cancellation boundaries and retained cancellation cause are verified below.
-The complete real Linux Joplin workflow remains **partial or failed** because
-process ownership/cleanup cannot be verified. Publishing a typed reply, exiting
-the CLI, and cleaning up its application are separate observations.
-
-## Source and deterministic regressions
-
-Latest-main control is `fe2a398dd9ab290ba6cb3411403d319cec8d07a2`.
-The existing reviewed PR head `af732dd8` was integrated with that main in
-`3b094802a`. Its initial 47 focused cases passed. An unrelated compact-catalog
-test hit its unchanged 10-second CI deadline; an unchanged-source job retry
-passed. The original failed execution remains in CI history.
-
-Real CLI verification exposed an introduced regression: the PR replaced an
-already observed cancellation with success after the final snapshot. A later
-cleanup failure then lost the cancellation category and caller reason. Two
-deterministic cases reproduced this for process and transport cleanup: 20 old
-cases passed and both new cases failed. Main's public reply retained category
-`cancelled`; the reviewed PR returned `execution_failure` for the same kind of
-cancelled wait plus incomplete cleanup.
-
-Fix `73d4a712b` records cancellation before finalization and uses one constructor
-for the early and late partial-capture errors. Cleanup failure keeps precedence,
-its diagnostics and the earlier cancellation cause. Cancellation first observed
-during cleanup retains the existing precedence. The fix changes the producing
-outcome; no CLI/MCP projection repair or ownership-policy exception was added.
-
-All **49 focused cases in three files** passed after the fix. Full static checks
-passed: six tasks plus architecture guards. Documentation checks also passed
-(six tasks, including two cached, plus five README consistency cases). One intermediate build rejected an
-over-narrowed `aborted === true` comparison; the original truthiness pattern
-resolved that TypeScript error before the passing build. Recorded catalog
-metadata is byte-identical to main. No new tool, schema, cache or normal-case
-result field was added.
-
-## Real application observations
-
-The unchanged official Joplin 3.7.21 ASAR is 233,575,014 bytes, SHA-256
-`767df409b18effe60421fbefcca873de237c7e813eac744ecdeebbc5e825a33a`.
-Acquisition is linked in the [original Joplin verification](javascript-native-handoff-identity-2026-10-15.md).
-Its complete unpacked native files/assets accompany it. These trials use the
-actual application with **generic Electron 44.7.0**, fresh profiles and Xvfb.
-They exercise startup/cancellation, not a completed Joplin business workflow.
-
-Frozen verifier revision `279aa29a7` records source/runtime hashes before the
-final probes. The controlled cases hold a REA-side Playwright reply while the
-real application runs. They do not establish a naturally occurring Joplin stall.
-
-| Controlled condition                        | Observed result                                                                                        |
-| ------------------------------------------- | ------------------------------------------------------------------------------------------------------ |
-| Main: first-window reply stays pending      | Still pending 20.001 s after cancellation; verifier watchdog fails                                     |
-| Fixed: same pending first-window reply      | Cancellation returned in 5.658 s; cancelled action retained                                            |
-| Fixed: initial snapshot reply stays pending | Cancellation returned in 5.335 s; no invented partial snapshot                                         |
-| Fixed: final snapshot reply stays pending   | Cancellation returned in 10.262 s; five-second cancellation grace expiry and initial snapshot retained |
-
-Every fixed case preserves the `cancelled` category. Every real case still has
-unverified provider cleanup and a nonzero verifier exit; these are cancellation
-phase proofs, not complete runtime passes. The known Linux ownership gap is
-tracked in [#4282](https://github.com/morluto/rea/issues/4282). Ownership was not
-inferred from process names, PIDs or executable paths to make these tests pass.
-
-The public CLI trials send SIGTERM after actual Joplin startup logging. Main
-and the fixed version both publish `cleanup_incomplete` with category `cancelled`
-and a cancelled action. The fixed reply was observed about 5.268 s after SIGTERM
-(50 ms polling resolution). Both fail the verifier's 20-second first-signal exit
-deadline and require a second, explicitly recorded recovery signal. The resulting
-143 exit is not proof that the first signal completed cleanup.
-
-The official packaged Joplin executable also passed static fuse admission, but
-its initial Inspector evaluation failed with a destroyed execution context before
-the cancellation condition was reached. Those attempts remain failed diagnostics;
-they establish no bundled-runtime compatibility or cancellation result.
-
-## Costs, limits and reproducibility
-
-Costly operations run serially on one CPU 10 with an 8 GiB hard limit, 6 GiB
-early stop, no swap and 192 tasks. The passing static gate used 153.534 s wall,
-152.274161 family CPU seconds and 6,442,016,768 peak cgroup bytes. It reported
-no OOM and verified payload cleanup. Cgroup memory includes file cache, not RSS.
-Other trials' exact counters and failures are preserved in the
-[compact record](electron-cancellation-2026-10-16.json).
-
-Payload-exit counters are collected while the observer remains alive and are
-not final whole-scope counters. Some failed probes retain live app/Xvfb processes
-at that point. Every recorded scope was independently confirmed inactive/dead
-after the external owner stopped it. That recovery does not establish successful
-provider cleanup.
-
-OS/build caches are uncontrolled. A timed-out baseline and a partial fixed
-workflow do not establish a completed-task speedup. Live event sets also differ,
-so reply-size differences do not establish token savings. Model billing, peak
-agent context and complete host/tool-schema token costs are unmeasured. Historical
-diagnostic helper hashes were not captured at execution; the record marks that
-gap instead of assigning the later frozen hash to earlier runs.
-
-Build each pinned checkout, then run under the existing
-[resource observer](../../experiments/analysis-efficiency/resource-counters.md)
-and a private Xvfb instance. The shared verifier supports all four named cases:
-
-```sh
-node experiments/analysis-efficiency/electron-cancellation.mjs \
-  --runtime-root /absolute/pinned-checkout \
-  --executable /absolute/electron-44.7.0/electron \
-  --application /absolute/Joplin/resources/app.asar \
-  --profile-root /absolute/temporary-profile-parent --case window-wait
-```
-
-Use `initial-state`, `final-state` or `normal-wait` for the other boundaries.
-The public CLI probe has no injected stalled reply:
-
-```sh
-python3 experiments/analysis-efficiency/joplin-cli-cancellation.py \
-  --node /absolute/node-24.18.0/bin/node --runtime-root /absolute/pinned-checkout \
-  --executable /absolute/electron-44.7.0/electron \
-  --application /absolute/Joplin/resources/app.asar \
-  --profile-root /absolute/temporary-profile-parent
-```
-
-The scripts return failure rather than claiming complete cleanup when the real
-owned app remains unresolved. App binaries, extracted runtimes/profiles and raw
-large output are regenerable and are not committed. No macOS, Windows, full
-Joplin GUI or live-model success is claimed.
-
-## Review follow-up: verifier exit semantics
-
-Review of `beb4a47db` found a verifier false pass: the shared probe could exit
-successfully once its main process had exited even though provider cleanup was
-still unverified. The CLI probe also accepted `cleanup_incomplete`. Those are
-verifier bugs; they do not invalidate the recorded failed Joplin trials above.
-
-Revision `227217ac3` requires verified provider cleanup in both probes and the
-public `cancelled` category in the CLI. Six controlled oracle cases cover an
-exited main process with incomplete cleanup, complete cleanup, transport failure
-after process cleanup, and a wrong public category. Both old scripts fail these
-regressions; the fixed scripts pass all six. These cases substitute provider/CLI
-replies and do **not** establish real-provider compatibility or performance.
-
-The fixed, frozen scripts were then rerun on the same real Joplin artifact. The
-shared window-wait probe retained cancellation in 5.577 s and explicitly failed
-because cleanup remained unverified. The public CLI retained category `cancelled`
-and a cancelled action, published its reply about 6.335 s after SIGTERM, and
-again failed the first-signal exit deadline. Both verifiers exited nonzero; their
-externally owned scopes were stopped separately. Production source and the
-earlier historical records are unchanged. The compact record appends these
-observations under `review_followup`.
-
-Run the controlled oracle regressions separately from the real-app commands:
-
-```sh
-python3 experiments/analysis-efficiency/electron-cancellation-oracles.py \
-  --node /absolute/node-24.18.0/bin/node
-```

docs/verification/electron-ipc-listeners-2026-10-16.md

@@ -1,592 +0,0 @@
-# Electron IPC listener verification, 2026-10-16
-
-[#4390](https://github.com/morluto/rea/issues/4390), existing
-[#4389](https://github.com/morluto/rea/pull/4389), umbrella
-[#4027](https://github.com/morluto/rea/issues/4027).
-
-All 73 IPC boundary regressions pass, alongside shared projection/actions and
-converted MCP schema checks. Real draw.io operation phases succeed.
-Every real capture still **fails overall provider cleanup**. These are distinct
-results; neither completed-task acceleration nor token savings is established.
-
-## Producing boundary and regressions
-
-The existing PR `efd452948` was integrated with main `180ba03bf` in `5c3b02468`.
-It fixes removal through the caller's original function and duplicate recording
-of `once` invocations. Independent review found two further producing-boundary
-problems: wrapper recognition evaluated caller `.listener` getters, and a copied
-`removeAllListeners` snapshot loop differed from native live-array traversal when
-removal observers prepended a listener.
-
-Both new differential cases failed on that implementation (14 passed, two
-failed). Fix `3c330f259` delegates traversal to Node, translating only owned `on`
-wrappers at `removeListener`, and preserves the `off` alias. Descriptor reads
-avoid evaluating getters. A further Proxy case exposed that descriptor reflection
-can itself run a trap (16 passed, one failed); `2fb7f5523` uses Node's Proxy
-identity first and removes the superseded catch. Those initial **17 cases** pass;
-the later decorator finding and final 23-case validation are recorded below.
-The native EventEmitter controls are semantic regressions, not real-app proof.
-
-The change uses weak wrapper keys, removes the copied traversal and its snapshot
-allocation, and adds no tool, cache, schema or normal reply field. Related
-compiled provider/service modules and catalog metadata were byte-identical to
-baseline main `180ba03bf` at the initial source freeze. This does not prove
-arbitrary function introspection equivalence: custom
-`.listener` properties and raw wrapper re-registration retain the limitations
-documented in [Electron observation](../electron-observation.md).
-
-## Unchanged real application and observed scenario
-
-Official [draw.io Desktop 32.4.1](https://github.com/jgraph/drawio-desktop/releases/tag/v32.4.1)
-AppImage SHA-256 is
-`c687a9f1ddcaa146b78547452d264c03c2afcf125639cba5deeb65f3e9554c9e`;
-both the release asset digest and published checksum file match. Its unchanged
-62,941,673-byte ASAR is
-`e64b9650c0b8241ca9a7d33b56386a385bceee63270cec701d3a467347b697e6`.
-Complete accompanying resources were extracted; no application source was edited.
-
-Public fuse inspection reports the official executable's Inspector fuse disabled.
-No vendor Inspector attempt was made. The following trials explicitly select
-generic Electron **44.7.0**, Xvfb and fresh profiles; they establish no packaged
-runtime compatibility.
-
-The real renderer initially displays an **Invalid file data** dialog. A public
-CLI startup smoke and independent DOM/argv probes preserve this failure, tracked
-separately in [#4494](https://github.com/morluto/rea/issues/4494). Its exact cause
-is not proven. Two attempts to click a palette item without handling the dialog
-timed out and were cancelled; they remain failed diagnostics. An initial helper
-also incorrectly queried `application.process()` after transport closure; the
-corrected helper retains the original ChildProcess handle instead.
-
-The final scenario uses declared REA clicks to dismiss that actual error and
-insert a visible palette item, then waits for rendering. Independent DOM reads
-confirm SVG elements **0 → 2**, disappearance of the error and the real unsaved
-changes indicator. The verifier exercises the real app callbacks and channels;
-the production hook wraps their registration as described above.
-The source also registers `app-load-finished` through both `once` and `on`;
-recording its once callback twice adds a spurious event.
-
-## Initial fixed-source ABBA observations
-
-Verifier/source revision is `d02cc934c`; its hashes were recorded before all four
-trials. Baseline is main `180ba03bf`. The same script, runtime, artifact and
-declared actions run in the order baseline, candidate, candidate, baseline.
-
-| Variant/run | IPC events | `app-load-finished` | SVG change | Pipeline wall s | Family CPU s | Peak cgroup bytes |
-| ----------- | ---------- | ------------------- | ---------- | --------------- | ------------ | ----------------- |
-| Baseline 1  | 8          | 3                   | 0 → 2      | 11.084          | 6.270053     | 560,615,424       |
-| Candidate 1 | 7          | 2                   | 0 → 2      | 11.135          | 6.395461     | 550,383,616       |
-| Candidate 2 | 7          | 2                   | 0 → 2      | 11.898          | 6.907123     | 525,631,488       |
-| Baseline 2  | 8          | 3                   | 0 → 2      | 11.469          | 6.526674     | 558,456,832       |
-
-Every declared action completed, every insertion oracle passed, and no verifier
-deadline fired. Every provider returned `cleanup_failed`; the captures remain
-partial/failed, including possible dirty-editor teardown and the known Linux
-ownership gap [#4282](https://github.com/morluto/rea/issues/4282). Baseline 2 also
-reports Xvfb temporary-directory cleanup failure (payload exit 5). Its directory
-identity was not captured; no broad path-based deletion was attempted.
-
-Runs are serial on CPU 10 with one-CPU quota, 8 GiB hard memory, 6 GiB early
-stop, no swap and 192 tasks. Counters cover the cgroup family at payload exit
-while the observer remains alive; they are **not final whole-scope counters**.
-Memory includes file cache, not RSS. Some scopes still contain Xvfb at that
-point; all recorded scopes were later independently confirmed inactive/dead.
-External recovery does not establish provider cleanup.
-
-OS/build caches are uncontrolled; these are first/repeat fresh-process runs,
-not verified cold/warm system pairs. Two samples per variant and a cleanup-bound
-failed workflow cannot establish a speedup. Token billing, peak agent context,
-complete schema/call costs and actual MCP-wire parity are unmeasured. Fewer
-events alone do not establish lower token cost.
-
-Full static checks passed (two tasks, no cache hits): 89.441 s wall,
-88.630288 family CPU s and 4,337,172,480 peak cgroup bytes, with no OOM.
-Documentation checks also passed (6 tasks plus five README consistency cases).
-The [selected JSON record](electron-ipc-listeners-2026-10-16.json) retains exact
-source/input identities, failed attempts, coverage, IPC and resource receipts.
-Historical diagnostic helper hashes were not captured and remain explicitly
-unknown; the frozen hash is not assigned to them retrospectively.
-
-## Reproduction
-
-Build both pinned checkouts. Under the existing resource observer and a private
-Xvfb instance, use the committed helper for each runtime root in ABBA order:
-
-```sh
-node experiments/analysis-efficiency/drawio-electron-lifecycle.mjs \
-  --runtime-root /absolute/pinned-checkout \
-  --executable /absolute/electron-44.7.0/electron \
-  --application /absolute/drawio/resources/app.asar \
-  --profile-root /absolute/temporary-profiles --dismiss-error \
-  --selector '.geSidebar a.geItem:visible >> nth=0'
-```
-
-The helper returns failure on incomplete provider cleanup. This shared-service
-probe does not establish successful public CLI/MCP workflows. App images,
-extractions/profiles and full Result files are regenerable and excluded from Git.
-
-## Review follow-up: normalization before app decorators
-
-Fresh review of `f3bb9b9ed` found that translation inside a patched
-`removeListener` happened after an application's outer decorator had already
-seen the recording wrapper. Two native controls reproduced this with stable and
-replaced decorators (17 passed, two failed).
-
-`c8c494b5c` delegates the original Node traversal through a private forwarding
-receiver. It shares the real emitter's live state and translates owned `on`
-entries **before** invoking the current application removal method. App methods
-and getters receive the real emitter; read-only method properties remain valid.
-Native once entries pass unchanged. The public `removeListener`/`off` patches
-are removed. Five decorator variants pass: stable, replaced, read-only, getter
-and Proxy.
-
-An additional mutation case proved that reading a changed public `.listener`
-getter before delegation also changed deletion timing (22 passed, one failed).
-Final source `5a094a0df` retains canonical removal targets in the weak owner
-registry. Only unchanged data links are translated; changed getters run when
-Node performs removal, preserving the exception and state transition. All
-**23 cases** pass, including the original retention/fatal-error coverage.
-
-The same frozen draw.io verifier was reused. The follow-up ABBA attempt ran
-its first baseline, then the resource launcher refused the other three requests
-because 8 GiB plus its 4 GiB host reserve was unavailable. Those are **not
-executed**, with no performance measurements. The final source was separately
-admitted and completed dialog recovery and insertion with seven IPC events;
-overall cleanup still failed, and Xvfb teardown also returned an error. No new
-completed-task speedup or cold/warm pair is claimed.
-
-Final static checks passed: two uncached tasks, 135.173 s wall, 133.786166 family
-CPU s and 4,274,634,752 peak cgroup bytes, no OOM. The JSON record appends exact
-source pins, denial logs, final real-app/public cleanup diagnostics and checks
-under `review_followup`; the initial records were not overwritten.
-
-## Callback invocation and remaining raw-metadata limitation
-
-Source `514b73b78` invokes `handle` callbacks through captured `Reflect.apply`,
-preserving the receiver and actual arguments without reading an app-defined
-`.call` property. The added direct-call control and hook case pass; all **24
-IPC regressions** pass (3.661 s wall, 3.404 family CPU s, 318,291,968 peak cgroup
-bytes, no OOM). This is a Node boundary check, not a real Electron handle claim.
-
-An initial three-case experiment incorrectly assumed native EventEmitter avoided
-callable method-property reads. Its `on` and `once` controls themselves failed;
-they do not demonstrate hook regressions. The attempted intrinsic event-call
-change was reverted and those invalid cases removed. Both failed runs remain
-in `callable_followup`; no successful result is assigned to them.
-
-The same unchanged draw.io verifier at this source completes actual dialog
-recovery and shape insertion, with seven IPC events, SVG elements 0 → 2 and an
-unsaved-changes indicator. Overall provider cleanup still fails. Pipeline wall
-time is 12.610 s, family CPU 7.062834 s and peak cgroup memory 634,187,776 bytes;
-there is no paired performance or token claim. All recorded scopes were later
-independently inactive/dead, which does not establish provider cleanup.
-
-Fresh review also found a distinct remaining metadata case: changing a raw
-recording wrapper's writable `.listener` property can make an app decorator
-reject removal. A production-hook/native-Node probe reproduces this (plain:
-removed; hook: decorator throws and one listener remains). Exact reproduction
-and the ownership conflict are tracked in [#4513](https://github.com/morluto/rea/issues/4513).
-No affected real app has been identified. Removing the descriptor guard alone
-does not make native removal match the mutated wrapper; temporarily rewriting
-public app metadata would add further visible mutations. This limitation is
-explicit in the observation guide and is not represented as fixed by this PR.
-
-Current-source static checks also pass: two uncached tasks, 92.912 s wall,
-92.031383 family CPU s and 4,340,375,552 peak cgroup bytes, no OOM.
-
-## Native single/array dispatch follow-up
-
-Fresh review of `6fc2d2769` identified that the earlier native controls covered
-only one listener. Node 24.18.0 reads `.apply` during single-listener dispatch,
-but invokes each callback intrinsically during array dispatch. Native `once`
-uses `.call` for zero arguments and `.apply` otherwise. Unconditional `.apply`
-in the observation helper changed two of those paths: a multi-listener callback
-could throw before later callbacks ran, and zero-argument once read the wrong
-property. Four explicit native controls reproduce two failures (26 passed,
-two failed), rather than assuming all callable-property reads should disappear.
-
-Source `e8d7e8f20` keeps one observation boundary. An `on` recording wrapper
-delegates direct calls intrinsically and forwards native `.apply` calls through
-its own nonenumerable method. Node selects the route; the hook does not inspect
-or copy listener storage. `once` preserves its native zero/nonzero-argument
-invocation. All **28 cases** pass, including the prior callback identity,
-retention, reentrant-removal and fatal-error coverage. `handle` remains intrinsic.
-
-The unchanged real draw.io verifier again completes dialog recovery and shape
-insertion, with seven IPC events, SVG elements 0 → 2 and the unsaved indicator.
-Overall provider cleanup still fails; no deadline fires. Its 12.290 s pipeline
-run is a validation observation, not a paired performance comparison. Exact
-source hashes, failures, resource measurements and post-scope states are appended
-under `native_dispatch_followup`; all previous records remain unchanged.
-The separate raw metadata limitation [#4513](https://github.com/morluto/rea/issues/4513)
-remains open and is not represented as fixed.
-
-Final-source static checks pass: two uncached tasks, 171.430 s wall,
-169.139239 family CPU s and 4,091,392,000 peak cgroup bytes, no OOM.
-
-## Argument-list ownership follow-up
-
-Review of `23700fd2c` found two related representation errors. A raw callback's
-`.apply` accepts Arguments objects, other array-like objects, null or omitted
-argument lists; the recording helper assumed an Array. Native once also passes
-its actual Arguments object to a callback-defined `.apply`, whereas the hook
-passed a rest Array. Seven explicit native controls reproduce six failures
-(29 passed, six failed of 35).
-
-Source `a82d935ba` binds captured native Function apply to the method-forwarding
-function. JavaScript itself converts argument lists, treats null/undefined as
-empty and rejects invalid primitives before recording reads values. The
-array-like getter control is read exactly once. Once retains its actual
-Arguments object for invocation; recording alone takes an array slice. The
-captured slice helper is bound once, avoiding an extra helper-argument array
-on each invocation. No custom array-like parser or exception repair is added.
-
-All **35 cases** pass. The same frozen real draw.io verifier again completes
-dialog recovery and shape insertion with seven IPC events; no deadline fires,
-and overall provider cleanup still fails. Exact source identities, both failed
-boundaries, intermediate/final tests, resource costs and post-scope states are
-appended under `argument_list_followup`; previous records remain unchanged.
-
-Current-source static checks pass: two uncached tasks, 122.454 s wall,
-121.287057 family CPU s and 4,185,915,392 peak cgroup bytes, no OOM.
-The unchanged ASAR digest was checked again after the real-app trial.
-
-## Owned metadata and successful-Evidence verifier follow-up
-
-Fresh review of `41a513d99` found that `on` wrapper metadata used strict
-assignment. Native on does not write such metadata, so inherited Function or
-Object prototype setters/read-only fields could prevent registration only under
-capture. Four native controls fail before `5dcf79f29` (35 passed, four failed).
-The recording wrapper now defines its own data property directly; native once
-assignment behavior is retained. All **39 cases** pass.
-
-The verifier also incorrectly treated a successful Evidence envelope as a raw
-capture. Real cleanup failures had exercised only the separate partial path.
-`4a9a01f7a` reads successful `value.normalized_result` and preserves failed
-`error.partialObservation.capture`. The new
-`experiments/analysis-efficiency/drawio-electron-lifecycle-oracles.py` exercises
-the actual verifier with controlled success, partial cleanup, action failure,
-insertion failure and absent capture. The old verifier rejects valid successful
-Evidence before producing a summary; all five corrected controls pass.
-**These are controlled reply/exit checks, not real-provider evidence.**
-
-The corrected verifier was separately frozen before a real unchanged draw.io
-trial. Actual dialog recovery and shape insertion again complete with seven IPC
-events, no deadline and failed overall provider cleanup (pipeline 12.777 s).
-Success with real provider cleanup remains unverified. Earlier trials retain
-their earlier verifier hashes; the corrected hash is not assigned to them.
-Exact source pins, failed controls, resource costs and post-scope states are
-appended under `owned_metadata_and_verifier_followup` without replacing history.
-
-Final-source static checks pass: two uncached tasks, 99.992 s wall,
-98.956939 family CPU s and 4,237,795,328 peak cgroup bytes, no OOM.
-
-## Species-free recording and snapshot ownership
-
-Fresh review of `e2cf2d89b` found that slicing a rest Array invokes application
-`Array[Symbol.species]` before dispatch. The first control reproduced failed on
-dispatch (40 passed, one failed); once dispatch already used Arguments.
-Extending the check to retrieve the retained snapshot while the throwing getter
-remains installed exposed the same representation problem in snapshot maps
-(39 passed, two failed).
-
-Source `3141ac3f4` records from actual invocation frames while preserving native
-callback argument-list types: the method-based on path still passes an Array,
-and once passes Arguments. Group validation uses the existing recording loops
-without a filtered intermediate Array. Captured `Array.from` produces snapshots
-without species lookup, reading dropped-counter Maps directly rather than
-spreading them into another Array first. The initial **41 cases** pass, including both
-live snapshots under the throwing getter with zero getter reads.
-
-The frozen-source real unchanged draw.io operation again completes recovery and
-insertion with seven IPC events, no deadline and failed overall cleanup
-(pipeline 12.779 s). This does not establish that draw.io customizes species.
-The corrected verifier and its five previously passing controlled oracles are
-byte-identical to `4a9a01f7a`, so those unchanged oracle sources were reused.
-Exact hashes, failures, resource receipts and scope states are appended under
-`array_species_followup`; earlier records remain unchanged. There is no new
-completed-task performance or token/context claim.
-
-The native multiple-listener route was then included in the same live-species
-control: all **42 cases** pass. Only test coverage expanded; production hook
-and verifier bytes remain identical to `3141ac3f4`. Exact validation identities
-and the additional result are recorded under `all_native_dispatch_paths`.
-
-A fresh-profile real negative control omits `--selector` while retaining dialog
-recovery and the same 500 ms wait. SVG elements remain **0 → 0** and unsaved
-changes remain false; insertion gives **0 → 2** and unsaved true. This supports
-the operation oracle rather than attributing startup rendering to the click.
-The control also returns seven IPC events and failed provider cleanup. These
-are different tasks, not a performance pair or a model-cell-count proof.
-
-Final 42-case source validation includes two uncached static tasks passing in
-94.234 s wall, 93.308800 family CPU s and 4,406,538,240 peak cgroup bytes,
-with no OOM. These are verification costs, not an application speedup.
-
-## Opaque apply inputs and iterator-free snapshots
-
-Fresh review of `84d9cf5db` found two producing-boundary regressions: native
-array-like conversion replaced the argument-list object before a custom
-listener `.apply` received it, and `Array.from` snapshots consulted application
-iterators on retained arrays/Maps. Four exact-input native controls and two
-snapshot controls fail before correction (42 passed, six failed of 48).
-
-Source `e442ca27f` forwards custom `.apply` the original receiver and method
-arguments without interpreting its opaque list. Custom apply may transform
-arguments or skip callback execution, so the hook emits a bounded
-`ipc-observation-gap` timeline record with the known registration channel. It
-does not fabricate a main-event invocation, argument shapes or callback result.
-The shared result projection retains explicit uncertainty and counts dropped
-gaps through existing retention. The canonical timeline enum adds that kind;
-the captured-IPC subset does not. Native apply still performs its own conversion
-before an actual callback frame is observed.
-
-Snapshots now copy arrays through private null-prototype indexed views and
-counters through captured native Map traversal. Neither retained buffers nor
-counter Maps are exposed to application iterators; returned records and shape
-arrays remain independent copies. No cache, tool or normal-dispatch metadata
-is added. The raw-wrapper metadata limitation in #4513 remains unfixed.
-
-The focused hook/projection/actions gate passes **68 cases** (48 + 4 + 16).
-The separate MCP/schema gate passes **23 cases**: an actual SDK client receives
-the gap alongside ordinary IPC Evidence, and Ajv2020 validates the advertised
-converted output; all canonical tool schemas also pass their existing checks.
-These tests use controlled providers and establish no real-provider success.
-The verifier and its five controlled exit/summary oracles are hash-identical to
-the earlier passing source and are reused without another redundant run.
-
-## Unrelated CI baseline failure
-
-CI run `38935598884` tested synthetic merge `eedae92d406015895a6d0eced5035da1b9ead07a`
-(head `84d9cf5db`, base `9d940c2f2`). Two firmware cleanup tests failed; another
-shard was cancelled by fail-fast. A fresh, unmodified detached checkout of that
-exact base reproduces the same failures: **33 passed, two failed** in
-`tests/boundary/firmware/firmwareIntegration.test.ts`. Evidence is posted on
-[the PR](https://github.com/morluto/rea/pull/4389#issuecomment-6221054273) and
-[existing #4475](https://github.com/morluto/rea/issues/4475#issuecomment-6221054775).
-This establishes that these failures predate the Electron changes; it does not
-resolve whether the firmware producer or its expectations need correction. No
-firmware code or assertions are changed here, and required CI is not bypassed.
-
-The first final-source real request fails before application launch because the
-previous `/tmp` runtime is absent. It is retained as an input-resolution failure,
-not a provider measurement. The cached Electron 44.7.0 archive is verified against
-the official release SHASUMS256 and extracted into a new owned task directory;
-its executable/archive digests are pinned before the next request. No target
-source, vendor fuse or scenario success requirement is changed.
-
-The recovered-runtime real operation completes all three declared actions:
-SVG elements **0 → 2**, unsaved changes true, seven IPC events, no deadline.
-Overall provider cleanup still fails. Current-source static validation passes
-two uncached tasks in **94.646 s wall, 93.878644 family CPU s and 4,300,570,624
-peak cgroup bytes**, no OOM. The initial static attempt's test-only SDK/Ajv type
-error is retained; parsing that boundary fixes it, and 12 affected client and
-projection cases pass again. `opaque_apply_and_iterator_followup` preserves all
-source pins, failures, resource receipts and independently checked scope states
-without replacing earlier measurements. Draw.io does not establish that real
-applications exercise the synthetic custom-apply/iterator cases.
-
-The final documentation gate also passes six tasks and five README consistency
-cases. Source and unchanged ASAR hashes are checked again after validation.
-
-## Borrowed apply receivers
-
-Fresh review of `7541a900c` supplied the borrowed custom-method case
-`raw.apply.call(g, emitter, list)`: the plain emitter runs `g`, while the hook
-hard-coded its registered callback as the method receiver. The same hard-coded
-receiver also affected borrowed native apply. Both native differential controls
-fail before correction (48 passed, two failed of 50).
-
-Source `da04465fe` maps only the hook wrapper itself to the original listener
-when forwarding custom apply; other method receivers pass unchanged. Native
-apply uses its actual receiver, preserving both ordinary wrapper recording and
-borrowed-call dispatch. The hook does not fabricate a registered callback
-invocation when another callable is selected. The method-forwarding boundary is
-corrected directly; no new helper, state, tool or schema is added. All **70**
-hook/projection/actions cases pass (50 + 4 + 16). Shared schema/client, projection
-and verifier/oracle sources are byte-identical to the prior passing versions,
-so their checks are reused by verified hash.
-
-CI run `38943919946` is confirmed by the successful build checkout log and Git
-parents to use merge `98c14dfc01fe4698a50eedc8b1cd1ac9cd03267d`
-(head `7541a900c`, main `4838f4449`). Its fifth shard fails the same two firmware
-cleanup tests as the unmodified `9d940c2f2` base control. The relevant firmware
-source/test and package paths have no changes between these main revisions.
-The REST PR `base.sha` remains stale at `2c7583599`; it is not used as the CI
-identity. No firmware code/assertion or required-check bypass is included.
-
-The frozen-source unchanged draw.io operation completes recovery/insertion
-again with seven IPC events, SVG **0 → 2**, unsaved changes true and failed
-overall provider cleanup. Pipeline: **12.038 s wall, 6.662295 family CPU s,
-598,835,200 peak cgroup bytes**. This remains a partial workflow, not a speedup
-claim. Final static checks pass two uncached tasks in **108.067 s wall,
-106.996233 family CPU s and 4,430,647,296 peak cgroup bytes**, no OOM.
-All prior measurements remain unchanged under `borrowed_apply_followup`.
-
-The final documentation gate also passes six tasks and five README consistency
-cases. Current source digests are checked again after validation.
-
-## Listener-owner intrinsic lifetime
-
-Fresh review of `f5b489c1b` found that late application replacement of
-`Object.defineProperty` prevents the hook's new wrapper properties from being
-created, while a plain native emitter still registers/invokes its callbacks.
-Inspection of this same new registration/removal owner found its other late
-property/constructor lookups. Seven independent native controls replace
-`Object.defineProperty`, `Object.getOwnPropertyDescriptor`, `Object.create`,
-`Reflect.get`, `Reflect.set`, global `Set` or global `Proxy`; each fails before
-correction (50 passed, seven failed of 57). The controls include both on/once
-execution and complete removal, with globals restored after the scenario.
-
-Source `a9c5611d0` captures the owner's descriptor/property operations and private
-constructors before application startup. The private receiver uses a direct
-null-prototype object literal instead of looking up Object.create. All **77**
-hook/projection/actions cases pass (57 + 4 + 16). Application-owned callback
-methods and actual receivers retain their existing semantics. No tool, schema,
-state, target authority or general-purpose hardening layer is introduced; this
-is not complete JavaScript introspection equivalence. Unchanged schema/client,
-projection and verifier/oracle checks are reused by verified source hashes.
-
-The preceding CI run `38946503183` tests confirmed merge
-`fcd7a9d92a2e64d6eb96d4fabfed7fc7f44b0d45` (head `f5b489c1b`, main `4838f4449`).
-Its 36 jobs finish with 29 successes, the same two firmware failures causing
-three failed jobs including summaries, and four fail-fast cancellations. The
-fifth-shard log again names the two cases reproduced on untouched main. No
-firmware code/assertions or required checks are altered.
-
-Frozen-source real unchanged draw.io actions complete again with seven IPC
-events, SVG **0 → 2**, unsaved changes true, no deadline and failed overall
-provider cleanup. Pipeline wall is **11.429 s**. Observed payload-exit cgroup
-counters are 6.441029 CPU s and 550,363,136 peak bytes, but the observer still
-sees one additional scope descendant: **family resource observation is
-unverified**, not a complete-family performance measurement. The scope is later
-inactive/dead after external recovery; this does not verify provider cleanup.
-No identity or cleanup cause is inferred from the remaining PID.
-
-Final static checks pass two uncached tasks in **90.980 s wall, 90.119351 family
-CPU s and 4,338,749,440 peak cgroup bytes**, no OOM. Source identities, all seven
-failures and resource limitations are appended under `listener_intrinsics_followup`
-without replacing any previous measurements.
-
-The final docs gate passes six tasks and five README consistency cases; source
-digests are checked again after validation.
-
-## Private collection method lifetime
-
-Fresh review of `e6c373d0` found that replacing `WeakMap.prototype.has` after
-hook initialization still intercepts its private wrapper registry. Inspecting
-the same owner found analogous get/set and visited-Set has/add lookups. All five
-independent native controls fail before correction (57 passed, five failed of
-62); plain EventEmitter registration, on/once calls and complete removal succeed.
-
-Source `774ed6aa6` binds these private WeakMap/Set methods before application
-startup and reuses captured Set membership for event-family classification.
-One initialization-only binding helper replaces duplicated binding construction
-for existing Map traversal/argument slicing too. It adds no helper argument
-arrays per invocation, cache, schema, tool or target authority. Application-owned
-callback methods/receivers remain dynamic. All **82** hook/projection/actions
-cases pass (62 + 4 + 16). The previous seven global-binding controls also remain
-green, and unchanged schema/client/projection/verifier/oracle checks are reused
-by verified source hashes. Arbitrary introspection and #4513 remain unsupported.
-
-Frozen-source unchanged draw.io actions complete again with seven IPC events,
-SVG **0 → 2**, unsaved changes true and failed overall provider cleanup. Pipeline
-wall **11.238 s**; observed payload-exit cgroup CPU **6.285321 s**, peak
-**556,285,952 bytes**. Another scope descendant remains at payload exit, so complete-family resource observation is unverified. Later external scope teardown does not prove provider cleanup.
-
-Final static checks pass two uncached tasks in **92.999 s wall, 92.227652 family
-CPU s and 4,371,951,616 peak cgroup bytes**, no OOM. Preceding CI38949129899 checks
-confirmed e6c3 + main4838, repeats the same two firmware failures and finishes
-31 successful /3 failed jobs including summaries /2 fail-fast cancellations.
-Sources, failures and resource limitations are appended under
-`private_collection_methods_followup`; prior fields remain unchanged.
-
-The final docs gate passes six tasks and five README consistency cases; source
-digests are verified again afterward.
-
-## Unknown listener-chain ownership
-
-Fresh review of `0b4f2e81` found that the bounded Boolean chain test treats a
-still-unexamined function as fresh when 17 app decorators hide an owned once
-wrapper. Two emits then produce three invocation records for one actual once
-callback. The same unknown-as-fresh error affects accessor/Proxy links. Four
-native controls fail before correction (63 passed, four failed of 67); the
-16-decorator boundary already passes. A deep ordinary on control confirms
-missing ownership cannot justify fabricated captured IPC either.
-
-Source `ef46b8f0b` classifies metadata as owned, unowned or unknown. Bounded-walk
-exhaustion, accessor links and Proxies preserve native registration without
-adding another recording wrapper. Successful unknown registrations retain a
-bounded `listener-chain` gap; this is not proof of IPC delivery. An existing
-inner wrapper may still report its actual once invocation. Shared native
-data-descriptor parsing preserves accessor uncertainty at recognition/removal
-and avoids inherited descriptor-value interpretation. The superseded Boolean
-classification is removed.
-
-The shared projection explains both gap boundaries and retention/coverage, and
-an actual MCP SDK client receives custom-apply and listener-chain gaps alongside
-ordinary IPC Evidence, validated by its converted advertised schema. All **96**
-hook/projection/actions/MCP cases pass (67 + 5 + 16 + 8). A test-only lint length
-failure is corrected by generating repeated fixture rows from one table without
-relaxing rules; all **13** affected client/projection cases pass again. The
-canonical schema and unchanged verifier/five controlled oracle sources retain
-their earlier passing checks by verified hashes; the changed projection/client
-are freshly tested rather than claimed unchanged.
-
-Prior CI run `38951509761` uses confirmed merge
-`fa090a6bde3a5dadeb71066824477292520fb43b` (0b4f + mainf31b231a). All **36 jobs
-succeed**. The earlier unrelated firmware failures do not recur in this
-combination; their cause is not inferred or claimed fixed here. Current-source
-CI/review remain required. No firmware code/assertions were modified.
-
-Frozen-source unchanged draw.io recovery/insertion again completes with seven
-IPC events, SVG **0 → 2**, unsaved true, no deadline and failed overall provider
-cleanup. Pipeline wall **11.163 s**; observed payload-exit cgroup CPU **6.203177 s**,
-peak **547,418,112 bytes**. An extra scope descendant leaves complete-family
-resource observation unverified; later inactive/dead scope after external
-recovery does not establish provider cleanup.
-
-Final static checks pass two uncached tasks in **88.383 s wall, 87.726306 family
-CPU s and 4,399,632,384 peak cgroup bytes**, no OOM. All source identities, failed
-controls, corrected fixture-only lint failure and resource caveats are appended
-under `chain_ownership_followup`; historical fields are unchanged.
-
-Final docs validation passes six tasks and five README consistency cases;
-current source digests are verified again afterward.
-
-## Inherited listener-link coverage
-
-Fresh review of `ae2cd8d4` found that a missing own descriptor is not absence:
-an app decorator can inherit its data link to an owned once wrapper. Native
-removal follows that link and removes the decorator; the hook hid it under
-another recorder, left a listener installed and produced three invocation
-records for one callback. Five native inherited-link cases fail before correction
-(68 passed, five failed of 73): data/getter/Proxy prototypes and prototype
-depths16/17. A late Object.getPrototypeOf replacement control already passes.
-
-Source `e22ce9aaf` completes bounded native prototype lookup at the descriptor
-owner, capturing getPrototypeOf before startup. Data links retain their actual
-source value. A setter-only property has a known undefined read that shadows
-ancestors; a getter, Proxy or incomplete walk remains unknown. Missing metadata becomes absent only after the prototype chain ends; found
-properties retain native read/shadowing semantics. Registration and removal consume
-the same parsed descriptor, and redundant outer Proxy interpretation is removed.
-Neither existing resource bound is raised. All **102** hook/projection/actions/
-MCP cases pass (73 + 5 + 16 + 8). Projection/client are freshly tested unchanged
-sources; canonical schema and verifier/oracles retain prior checks by hash.
-
-Prior CI run38955237255 tests confirmed merge9c0ceb152c902c1339806608f8b4a010c3d22fc6
-(ae2c + main8116dc06). All36 jobs succeed; current-head CI/review remain required.
-
-Frozen-source unchanged draw.io recovery/insertion again completes with seven
-IPC events, SVG **0 → 2**, unsaved true and failed overall provider cleanup.
-Pipeline: **11.264 s wall /6.376574 family CPU s /557,068,288 peak cgroup bytes**.
-Payload-exit observation is verified at that phase while the observer lives;
-these are not final whole-scope counters or provider cleanup proof.
-
-Final static checks pass two uncached tasks in **90.797 s wall, 90.096799 family
-CPU s and 4,335,267,840 peak cgroup bytes**, no OOM. All source identities, native
-failures and current results are appended under `inherited_listener_links_followup`;
-previous fields and earlier resource caveats remain unchanged.
-
-Final docs validation passes six tasks and five README consistency cases;
-current source digests are verified again afterward.

docs/verification/electron-native-once-2026-10-16.md

@@ -1,142 +0,0 @@
-# Native Electron once dispatch — 2026-10-16
-
-#4593 was reported by review of #4562, but its source was already in main from
-#4389. The initial report was explicitly source-only; subsequent paired controls
-confirmed the bug. This change delegates `once` creation, firing and callable
-selection to the actual runtime and observes only established callback entry.
-CLI and MCP continue to share the same hook, event model, projection and retained
-Evidence. No new tool, schema, execution authority or analysis cache is introduced.
-
-## Paired native controls
-
-The baseline is `709b5cbdc15aa757f89c38ecd12e5a47710747a6`. Final source is
-`4ebd0f60e860daa57a7033c6e77ea7f5f4b8ac97`, including the two review-gap fixes below. Earlier source cohort
-`c0b52b5408fa97013798e6ecee885ccac08e7356` contains the fix; the final cleanup
-commit is `e60c4a1098321ed2a7f564ae35909a31d707694f`, which removes the obsolete fifth helper argument and
-unreachable copied call/apply dispatch branches after inspecting every caller.
-The pre-review gap-owner follow-up is `7f05f476c52498adba41d943ead1a86e7216ca76`. The adjacent JSON preserves
-source hashes and separate measurement cohorts, including the initial 93-row prefix.
-The final review JSONL contains 117 paired rows (39 inputs × 3 runtimes). The
-earlier 96-row JSONL remains unchanged, including its initial 93-row prefix. Both
-comparisons have identical native
-control facts in each before/after pair. Regenerable binaries, apps, profiles
-and multi-MB raw captures are excluded from Git.
-
-| Actual engine                                              | Cases | Baseline behavioral differences | Fixed differences |
-| ---------------------------------------------------------- | ----: | ------------------------------: | ----------------: |
-| Node 24.18.0 (pinned)                                      |    39 |                               4 |                 0 |
-| Official Node 24.21.0                                      |    39 |                              16 |                 0 |
-| Generic Electron 44.7.0 embedded Node 24.21.0, run as Node |    39 |                              16 |                 0 |
-
-The original 21-case reproduction found 0/9/9 differences respectively. The
-pre-review 32-case cohort found 1/13/13. The final 39-case suite adds readonly
-callback methods, emitter method invariants, native metadata writes, failure
-recovery and non-callable callback methods. The extra pinned-runtime difference is registration
-metadata ordering. On the newer runtimes, opaque callback methods can suppress
-callbacks under the old hook although native dispatch executes them. The pinned
-runtime also catches false invocation records when an opaque method legitimately
-skips the callback. The added regression fails on the baseline for that false fact.
-
-These are **controlled producer cases with a minimal Electron module**, including
-the actual embedded Node binary, not a real GUI application's natural callback
-loss. Native traces, receiver checks, failures and remaining listeners are compared
-exactly. Expected property reads are derived from each runtime rather than copied
-from one Node implementation. The custom-apply guard still checks its original
-Arguments representation when the runtime actually invokes that method.
-
-## Ownership and uncertainty
-
-Native once wrappers keep their public callback identity and descriptor attributes.
-The registration receiver forwards methods/getters to the original emitter and
-supports readonly method descriptors. A private callable receives an actual
-Arguments frame, avoiding application Array species/iterators when recording.
-Metadata recognition and admission share one bounded descriptor lookup.
-
-An application-selected opaque call/apply can bypass observation; a bounded
-`custom-call`/`custom-apply` gap replaces invented invocation facts. Opaque native
-metadata writes or registration lookups keep the exact original callback/native
-operation and emit `once-metadata` gaps. The temporary unobserved scope is restored
-even if registration throws. The 39-case suite checks this recovery, including a native alias that bypasses
-patched `on`; the once owner retains the observation gap for that path. #4513 raw
-recording-wrapper mutation remains explicitly unfixed.
-
-Review found two missing failure facts: a decorator can register through an
-unhooked alias and then throw, and a runtime can read a non-callable call/apply
-property before dispatch fails. Both new regressions fail on the pre-review
-source. The once owner now finalizes its missing gap in `finally`, after restoring
-the scope; the callable metadata owner records a failed gap while preserving the
-exact non-callable value. Error identity and native callback behavior are retained.
-
-Two short-lived proxies are used for an observable once registration. Metadata
-remains weakly retained, and existing event/serialization budgets remain in force.
-The added registration cost was not isolated; no speed or token improvement is
-claimed. The saved producer comparison is a correctness experiment, not a whole
-application performance benchmark. Its runner reports differences instead of
-exiting unsuccessfully for an expected bad baseline; the regression tests assert
-that fixed behavior matches native behavior and observation claims are truthful.
-
-## Real application verification
-
-Unchanged Joplin Desktop 3.7.21 ASAR and explicit generic Electron 44.7.0 run the
-shipped welcome note/1075×666 PNG → actual resource context menu → app bridge →
-blocked reveal workflow. The image stays visible, page errors remain empty,
-reveal events increase 0→1, and the shared retained capture contains the exact
-event. Both staged hook files are hashed against the selected source before launch.
-No synthetic application IPC channels or replacement app callbacks are added.
-
-The argv shim is an explicit test adapter for the still-failing standard startup
-#2974. **Overall provider cleanup remains failed (#4282)** and the verifier exits
-nonzero. External scope teardown is not provider cleanup. The first frozen real
-pipeline takes 17.680 s; observed payload-exit CPU 16.272793 s and peak 1,395,253,248 B
-have an extra descendant, so complete-family observation is **unverified**. The
-cleanup cohort is recorded separately. The pre-review 32-case source repeats the real
-operation successfully, but overall cleanup still fails: 18.074 s pipeline, observed
-CPU 17.011774 s / peak 1,422,839,808 B; complete-family measurement remains unverified. No completed public CLI/MCP workflow,
-real Windows/macOS run, natural app callback-loss reproduction or full check:pr
-is claimed.
-
-The final review source repeats the same real operation: 18.353 s pipeline,
-observed CPU 17.098599 s / peak 1,387,556,864 B; complete-family measurement remains
-unverified and overall provider cleanup fails. An earlier trial failed to initialize
-the display because the provider environment omits XAUTHORITY. That launch is
-preserved separately; the fresh final trial uses local Xvfb with `-nolisten tcp -ac`,
-not a production provider change.
-
-Frozen local validation: 75 hook cases on both Node versions; 5 projection + 8 MCP
-cases on the unchanged shared contracts; static checks pass (final 118.946 s wall / 117.752622 s CPU / 4,282,826,752 B
-cgroup peak, verified payload-exit family observation). The pinned final run uses
-`test:focused`; an attempted `test:local` invocation was rejected before tests ran
-and is recorded as not executed. See JSON for exact
-commands/cohorts, failed candidate attempts, source pins and measured resources.
-Failures include the Array-species frame, readonly receiver invariants, metadata
-setter identity, on-getter ordering, a lint/interoperability correction and helper
-preparation failures. They are not relabeled as results from the final source.
-
-All heavy work runs serially with CPU 10/quota 1, 8 GiB hard/6 GiB early/no swap/192 tasks.
-Counters are captured at payload exit with the observer alive, not final whole-scope
-counters; cgroup peak includes file cache. Each final Joplin run has a new private
-configuration mount. Filesystem/runtime/build caches are warm; cold-system and
-warm-repeat costs are unmeasured. Agent/billed tokens and public reply/context
-costs are unmeasured. The broad internal error capture size is not an agent-token
-measurement. All owned scopes are checked inactive/dead independently.
-
-## Reproduce the producer comparison
-
-Use the pinned project toolchain and explicitly provided alternate runtimes.
-The alternate Node 24.21 archive is checked against [official checksums](https://nodejs.org/download/release/v24.21.0/SHASUMS256.txt);
-its archive/binary hashes are recorded. No global toolchain is upgraded.
-
-```sh
-python3 experiments/analysis-efficiency/electron-once-runtimes.py \
-  --hook-root /absolute/checkout-to-measure \
-  --node /absolute/pinned-node \
-  --node /absolute/node24.21 \
-  --electron /absolute/generic-electron44.7 \
-  --output /absolute/owned-output
-```
-
-Run this under the recorded resource wrapper. For a baseline comparison, use a
-clean checkout of 709b5cbd as hook-root while keeping the same current oracle/runner.
-The runner retains full JSON and prints a compact summary. The real Joplin recipe
-is in [the shell verifier record](electron-shell-sync-2026-10-16.md); select the
-current runtime-root. That workflow must remain nonzero while cleanup fails.

docs/verification/electron-native-once-2026-10-16.review.rows.jsonl

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-{"runtime":2,"mode":"apply-throwing-getter","arguments":3,"native":{"body_calls":1,"correct_receiver":true,"trace":["body:3"],"error":null,"listeners_after":0},"baseline_hooked":{"body_calls":0,"correct_receiver":true,"trace":["get:apply"],"error":"Error: getter:apply","listeners_after":0},"candidate_hooked":{"body_calls":1,"correct_receiver":true,"trace":["body:3"],"error":null,"listeners_after":0},"baseline_observation":[{"kind":"main-event-invocation","event":null,"error":true}],"candidate_observation":[{"kind":"main-event-invocation","event":null,"error":false}]}
-{"runtime":2,"mode":"inherited-listener-setter","arguments":0,"native":{"body_calls":1,"writes":[true],"public_identity":false,"error":null},"baseline_hooked":{"body_calls":1,"writes":[true],"public_identity":false,"error":null},"candidate_hooked":{"body_calls":1,"writes":[true],"public_identity":false,"error":null},"baseline_observation":[{"kind":"main-event-invocation","event":null,"error":false}],"candidate_observation":[{"kind":"ipc-observation-gap","event":"once-metadata","error":false}]}
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-{"runtime":2,"mode":"readonly-emitter-methods","arguments":0,"native":{"body_calls":1,"seen":["on:true","removeListener:true"],"error":null},"baseline_hooked":{"body_calls":1,"seen":["on:true","removeListener:true"],"error":null},"candidate_hooked":{"body_calls":1,"seen":["on:true","removeListener:true"],"error":null},"baseline_observation":[{"kind":"main-event-invocation","event":null,"error":false}],"candidate_observation":[{"kind":"main-event-invocation","event":null,"error":false}]}
-{"runtime":0,"mode":"on-getter-native-alias","arguments":0,"native":{"body_calls":1,"reads":1,"listeners_after":0},"baseline_hooked":{"body_calls":1,"reads":1,"listeners_after":0},"candidate_hooked":{"body_calls":1,"reads":1,"listeners_after":0},"baseline_observation":[{"kind":"main-event-invocation","event":null,"error":false}],"candidate_observation":[{"kind":"ipc-observation-gap","event":"once-metadata","error":false}]}
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-{"runtime":2,"mode":"on-getter-native-alias","arguments":0,"native":{"body_calls":1,"reads":1,"listeners_after":0},"baseline_hooked":{"body_calls":1,"reads":1,"listeners_after":0},"candidate_hooked":{"body_calls":1,"reads":1,"listeners_after":0},"baseline_observation":[{"kind":"main-event-invocation","event":null,"error":false}],"candidate_observation":[{"kind":"ipc-observation-gap","event":"once-metadata","error":false}]}

docs/verification/electron-shell-sync-2026-10-16.md

@@ -1,91 +0,0 @@
-# Electron synchronous shell boundary verification — 2026-10-16
-
-Fix #4393 reuses Nitin13-git's existing PR #4562. The boundary owns a fixed
-method/return table: existing asynchronous blocks still reject, while
-`showItemInFolder` returns `undefined` and `writeShortcutLink` returns `false`.
-Both new blocks use the existing shape-only event recorder, shared by CLI/MCP.
-No tool, schema, capture authority, analysis cache or launch behavior is added.
-
-## Source and controlled regression
-
-The fresh main base is `f26973a52918a938631e90fdc9116f7b85a62a52`;
-implementation integration is `0386b60fb` and frozen verifier source is
-`3f231735c3fbc28918590ddc61461871c8a2aa4d`.
-The adjacent JSON records frozen final script/runtime/input hashes and all attempts;
-unpinned exploratory helper revisions are explicitly identified.
-Original contributor attribution remains in Git ancestry.
-
-Using the candidate test with the base boundary produces **73 passes / 1 failure**:
-the fake native shortcut implementation executes and returns true. With the
-candidate boundary, **87 cases pass** (74 staged-hook, 5 projection, 8 MCP).
-These test native dispatch suppression, synchronous results, shape-only
-retention and the shared event schema. The fake Electron cases and controlled
-MCP provider do not prove a real Windows shell implementation was exercised.
-`npm run check:fast` passes both uncached tasks. Build-cache differences and
-different case counts make the red/green timings unsuitable as a speed comparison.
-
-## Real Joplin workflow and limits
-
-Inputs: unchanged Joplin Desktop **3.7.21** ASAR (233,575,014 bytes), and the
-explicit generic Electron **44.7.0** runtime. Acquisition/checksum references
-are in `javascript-native-handoff-identity-2026-10-15.json` and
-`electron-cancellation-2026-10-16.json`; this is not vendor-executable compatibility.
-No executable fuse is changed. Large downloadable inputs and generated profiles
-are not committed or retained as an experiment bundle.
-
-The verifier opens Joplin's shipped **1. Welcome to Joplin!** note and real PNG
-attachment. It selects Joplin's actual editor layout and resource context-menu
-callbacks; Joplin's existing bridge calls the real patched shell method. The
-native popup presentation is captured for automation; its application callbacks
-are not replaced. Before any app actions, the verifier requires the active hook.
-It requires zero earlier reveal events, one new blocked shape-only reveal event,
-a still-rendered attachment and an identical event in the shared retained capture.
-
-**Standard launch remains unsuccessful.** The earlier standard probe reports
-`Unknown flag: -r` in Joplin's start-flag parser; the frozen standard verifier
-times out waiting for the application search input. This is relevant to #2974,
-not fixed here. A discarded NODE_OPTIONS experiment was invalid: Playwright
-removes that variable, so no hook was installed. Those attempts are never used
-as interception or performance evidence.
-
-The explicit `--argv-shim-transport` test adapter loads the provider's staged
-canonical hook and removes only its own exact `-r`/shim pair from app argv before
-Joplin starts. It does not modify the ASAR or production provider. Its successful
-operation phase is not a successful standard public CLI/MCP workflow. Provider
-cleanup still fails (#4282); the verifier exits nonzero, preserving the distinction.
-External owned-scope teardown does not establish provider cleanup.
-
-The first valid shim probe reaches one blocked reveal, visible 1075×666 PNG,
-no page errors and retained capture evidence. The final frozen rerun additionally
-checks event causality and exact capture equality. Detailed measured results and
-whole-family observation status are in the JSON. The final controlled pipeline
-takes16.989s wall /16.055812 family CPU s /1,376,382,976 peak cgroup bytes
-with verified payload-exit observation; the overall workflow still fails cleanup. Each final trial has a new
-private config mount; earlier exploratory shared-config trials are not independent
-cold runs. Filesystem/runtime/build caches are warm; no cold-system or warm-repeat
-speedup is claimed. Agent/billed tokens are unmeasured; there is no token benefit claim.
-
-## Reproduction
-
-Use the pinned Node/npm toolchain. Install dependencies and build with
-`npm ci` and `npm run build:cached`. Create an owned writable packet directory
-with `tmp`, `profiles`, and `config/joplin-desktop`. On Linux, bind that private
-config over the actual user config directory in a disposable `bwrap` mount
-namespace (do not change HOME), keep the application resources read-only and
-run under Xvfb. Set TMPDIR to the owned writable packet `tmp` directory. Run:
-
-```sh
-node experiments/analysis-efficiency/joplin-shell-boundary.mjs \
-  --runtime-root /absolute/rea-checkout \
-  --executable /absolute/generic-electron \
-  --application /absolute/Joplin/resources/app.asar \
-  --profile-root /absolute/owned-packet/profiles \
-  --argv-shim-transport
-```
-
-Omit the last flag for the failing standard launch. Run heavy work serially under
-`resource-run.py --memory-gib 8 --observe-payload-exit`, one CPU, no swap, the
-6 GiB early-stop margin and 192-task ceiling. CPU/peak memory receipts are at
-payload exit with the observer alive; memory includes file cache, not just RSS.
-Unverified complete-family observations are explicitly marked. No Windows host,
-macOS host, vendor packaged runtime or full `check:pr` was executed here.

docs/verification/javascript-analysis-effects-2026-10-15.json

@@ -1,249 +0,0 @@
-{
-  "base_revision": "e598b4656ad90d59ede2d10454a0ac34f3813558",
-  "scope": "Canonical effect metadata only; real static Obsidian reads, no target execution",
-  "baseline_source_sha256": {
-    "src/contracts/toolEffects.ts": "39505b5f1501768515229a37ff67e8a1a512faedfb6669aee7a690a2ac3ac633",
-    "src/javascript/analysis/JavaScriptAnalysisWorker.ts": "49ea4e6344060fae3529ffe6e14bfadc534132067cfa5c370263dc7476375be0",
-    "scripts/verify/javascript/module-references.mjs": "9d5f0b8b35ed2ebb4591f9dc3baea0fc116a0c3fd7d8e5ce30ec476c84671ed1"
-  },
-  "final_source_sha256": {
-    "src/contracts/toolEffects.ts": "feb66f1b71c4a6849d1730227c9c74e4efbb67b4537d75fd41ce9ff615c25753",
-    "src/javascript/analysis/JavaScriptAnalysisWorker.ts": "49ea4e6344060fae3529ffe6e14bfadc534132067cfa5c370263dc7476375be0",
-    "scripts/verify/javascript/module-references.mjs": "9d5f0b8b35ed2ebb4591f9dc3baea0fc116a0c3fd7d8e5ce30ec476c84671ed1",
-    "tests/boundary/mcp/electronMcp.test.ts": "e483bec8512cfeafa7f951c8faf25e1aecd6e6987ea74aead14230501912928d",
-    "tests/boundary/mcp/toolSchemaValidity.test.ts": "ab6d9ba37035a6ff9279b820aa8660c50a3ef9f31d25f838c0ba40929148e89c"
-  },
-  "cohorts": {
-    "baseline": {
-      "metadata": {
-        "tool": "analyze_javascript_application",
-        "advertised_annotations": {
-          "readOnlyHint": false,
-          "destructiveHint": false,
-          "idempotentHint": true,
-          "openWorldHint": false
-        },
-        "session_effects": ["mutatesSession", "idempotent"],
-        "session_annotations": ["idempotent"],
-        "catalog_tool_count": 207
-      },
-      "metadata_probe_resources": {
-        "elapsed_seconds": 10.711,
-        "cpu_seconds": 10.503415,
-        "peak_cgroup_bytes": 842891264,
-        "payload_cleanup_verified": true,
-        "events_at_payload_exit": {
-          "memory.events": {
-            "low": 0,
-            "high": 0,
-            "max": 0,
-            "oom": 0,
-            "oom_kill": 0,
-            "oom_group_kill": 0
-          },
-          "pids.events": {
-            "max": 0
-          }
-        }
-      },
-      "real_workflow": {
-        "artifact": {
-          "path": "/tmp/rea-codemode-experiment-20261015/artifacts/obsidian-1.14.4.asar",
-          "sha256": "146ef8470d8cbb4a6db209bdc19bf2bad13350444186c0fd93c31087b142b92f"
-        },
-        "parent_evidence_id": "ev_73ef06e3b9b944f54c5257f7960279127d8518d2a73cd8618bd045dbe44e6b5a",
-        "samples": [
-          {
-            "round": 0,
-            "mode": "references",
-            "elapsed_ms": 109.19401700000162,
-            "calls": 1,
-            "structured_reply_bytes": 22158,
-            "facts_sha256": "d3be5e91d2ec3fd9a95851cfbbdef9c168bb4c7153f78810b8b235e005401299",
-            "matching_modules": 23,
-            "coverage": {
-              "status": "page",
-              "examined": 23,
-              "total": 23,
-              "next_offset": null,
-              "exhausted": true
-            }
-          }
-        ],
-        "token_costs": {
-          "tokenizer": "cl100k_base",
-          "tiktoken_version": "0.12.0",
-          "costs": {
-            "references": {
-              "selected_catalog": 7977,
-              "full_catalog": 195522,
-              "common_request": 53,
-              "common_summary": 2675,
-              "requests": 102,
-              "structured_replies": 5741,
-              "selected_catalog_task_total": 16548,
-              "full_catalog_task_total": 204093
-            }
-          }
-        },
-        "cli_parity": {
-          "evidence_id": "ev_b3586dfdf7d4f01157f8f2978326aaa7103987110f2df4fa5bf3331ff2898749",
-          "facts_sha256": "d3be5e91d2ec3fd9a95851cfbbdef9c168bb4c7153f78810b8b235e005401299",
-          "exact_cli_mcp_view_parity": true
-        }
-      },
-      "real_workflow_resources": {
-        "elapsed_seconds": 30.47,
-        "cpu_seconds": 29.939807,
-        "peak_cgroup_bytes": 1551282176,
-        "payload_cleanup_verified": true,
-        "events_at_payload_exit": {
-          "memory.events": {
-            "low": 0,
-            "high": 0,
-            "max": 0,
-            "oom": 0,
-            "oom_kill": 0,
-            "oom_group_kill": 0
-          },
-          "pids.events": {
-            "max": 0
-          }
-        }
-      }
-    },
-    "final": {
-      "metadata": {
-        "tool": "analyze_javascript_application",
-        "advertised_annotations": {
-          "readOnlyHint": false,
-          "destructiveHint": false,
-          "idempotentHint": true,
-          "openWorldHint": true
-        },
-        "session_effects": [
-          "mutatesSession",
-          "writesFilesystem",
-          "launchesProcess",
-          "idempotent"
-        ],
-        "session_annotations": ["idempotent", "open_world"],
-        "catalog_tool_count": 207
-      },
-      "metadata_probe_resources": {
-        "elapsed_seconds": 10.909,
-        "cpu_seconds": 10.664997,
-        "peak_cgroup_bytes": 853958656,
-        "payload_cleanup_verified": true,
-        "events_at_payload_exit": {
-          "memory.events": {
-            "low": 0,
-            "high": 0,
-            "max": 0,
-            "oom": 0,
-            "oom_kill": 0,
-            "oom_group_kill": 0
-          },
-          "pids.events": {
-            "max": 0
-          }
-        }
-      },
-      "real_workflow": {
-        "artifact": {
-          "path": "/tmp/rea-codemode-experiment-20261015/artifacts/obsidian-1.14.4.asar",
-          "sha256": "146ef8470d8cbb4a6db209bdc19bf2bad13350444186c0fd93c31087b142b92f"
-        },
-        "parent_evidence_id": "ev_73ef06e3b9b944f54c5257f7960279127d8518d2a73cd8618bd045dbe44e6b5a",
-        "samples": [
-          {
-            "round": 0,
-            "mode": "references",
-            "elapsed_ms": 110.17946600000141,
-            "calls": 1,
-            "structured_reply_bytes": 22158,
-            "facts_sha256": "d3be5e91d2ec3fd9a95851cfbbdef9c168bb4c7153f78810b8b235e005401299",
-            "matching_modules": 23,
-            "coverage": {
-              "status": "page",
-              "examined": 23,
-              "total": 23,
-              "next_offset": null,
-              "exhausted": true
-            }
-          }
-        ],
-        "token_costs": {
-          "tokenizer": "cl100k_base",
-          "tiktoken_version": "0.12.0",
-          "costs": {
-            "references": {
-              "selected_catalog": 7977,
-              "full_catalog": 195522,
-              "common_request": 53,
-              "common_summary": 2675,
-              "requests": 102,
-              "structured_replies": 5741,
-              "selected_catalog_task_total": 16548,
-              "full_catalog_task_total": 204093
-            }
-          }
-        },
-        "cli_parity": {
-          "evidence_id": "ev_b3586dfdf7d4f01157f8f2978326aaa7103987110f2df4fa5bf3331ff2898749",
-          "facts_sha256": "d3be5e91d2ec3fd9a95851cfbbdef9c168bb4c7153f78810b8b235e005401299",
-          "exact_cli_mcp_view_parity": true
-        }
-      },
-      "real_workflow_resources": {
-        "elapsed_seconds": 31.059,
-        "cpu_seconds": 30.663163,
-        "peak_cgroup_bytes": 1584574464,
-        "payload_cleanup_verified": true,
-        "events_at_payload_exit": {
-          "memory.events": {
-            "low": 0,
-            "high": 0,
-            "max": 0,
-            "oom": 0,
-            "oom_kill": 0,
-            "oom_group_kill": 0
-          },
-          "pids.events": {
-            "max": 0
-          }
-        }
-      }
-    }
-  },
-  "conditions": "Separate fresh MCP sessions, uncontrolled warm filesystem/build and shared-host scheduling. One CPU, 8 GiB hard cap, 6 GiB early stop, no swap. Resource counters are at payload exit with the observer alive, not final whole-scope counters; memory includes charged file cache, not summed RSS. Whole real-verifier resources include analysis, export, CLI parity and tokenizer; metadata probe resources are separate. Static BPE uses name/description/inputSchema catalog projections plus requests/structured replies, excludes annotations, metadata-probe calls, rendering/replay/reasoning/final-answer/model usage. No performance improvement or equivalence bound established by one before/after pair.",
-  "regressions": {
-    "baseline": "20 executed: 2 expected metadata failures, 18 passed",
-    "final": "27 passed after the test ownership cleanup across canonical effects and MCP/catalog boundaries",
-    "interim_correction": "26 passed before metadata assertions were split into their own target-free case to satisfy function-size lint"
-  },
-  "selected_input": {
-    "input_path": "/tmp/rea-codemode-experiment-20261015/artifacts/obsidian-1.14.4.asar",
-    "detail": "summary",
-    "source_paths": ["package.json", "main.js"]
-  },
-  "selected_view": {
-    "kind": "javascript",
-    "collection": "modules",
-    "projection": "references",
-    "where": {
-      "path": "main.js",
-      "kind": "javascript-module"
-    }
-  },
-  "observer_sources_sha256": {
-    "resource-run.py": "7728862171415e7dee2c11af2ead2b9a54265fccaf82a7113956d36b29065e33",
-    "resource_payload.py": "6f089e645459eba80c5d73e39c21606c78173a44daf49fabc3b88c4631ce51c6"
-  },
-  "runtime": {
-    "platform": "Linux x64",
-    "node": "24.18.0",
-    "npm": "11.16.0",
-    "tiktoken": "0.12.0"
-  }
-}

docs/verification/javascript-analysis-effects-2026-10-15.md

@@ -1,121 +0,0 @@
-# JavaScript analysis effect metadata verification
-
-Tracks #3867 under #4027. The canonical effect record omitted existing internal
-worker launches and source staging. `CapabilityInventory` and SDK registration
-already consume that owner directly; no adapter override is required. The
-[worker](../../src/javascript/analysis/JavaScriptAnalysisWorker.ts) creates a
-private runtime root, stages `.source` files and launches an owned REA worker.
-These are source-derived facts; the analyzed application code is not executed.
-
-## Executed results
-
-Public stdio MCP before/after:
-
-| Surface                      | Before                         | After                                      |
-| ---------------------------- | ------------------------------ | ------------------------------------------ |
-| `tools/list` `openWorldHint` | `false`                        | `true`                                     |
-| `binary_session` effects     | `mutatesSession`, `idempotent` | also `writesFilesystem`, `launchesProcess` |
-| Session annotation flags     | `idempotent`                   | also `open_world`                          |
-| Advertised tools             | 207                            | 207                                        |
-
-Regression assertions failed on the original contract: **2 failed,
-18 passed**. After correction and separating the target-free metadata case, **27 passed** across canonical effects, public
-Electron/JavaScript MCP and SDK-converted catalog validity. The tests retain the
-non-destructive, idempotent hints and exact session effects; no foreign target
-execution is declared.
-
-The existing real verifier analyzed official Obsidian 1.14.4 with `package.json`
-and `main.js` selected, then read the typed module references and verified exact
-public CLI/MCP parity. Both revisions returned the same parent/view Evidence
-identities and 23-row fact digest. Query replies remained 22,158 bytes and the
-selected-schema task remained 16,548 `cl100k_base` BPE tokens (204,093 with the full
-name/description/inputSchema catalog projection). These are static counts, not
-model billing; annotations, the separate metadata probe, host rendering/replay,
-reasoning and final answers are outside this projection. No hosted agent was run.
-
-| Complete real verifier |        Before |         After |
-| ---------------------- | ------------: | ------------: |
-| Elapsed seconds        |        30.470 |        31.059 |
-| CPU seconds            |     29.939807 |     30.663163 |
-| Peak cgroup bytes      | 1,551,282,176 | 1,584,574,464 |
-
-The scope includes shared analysis, temporary export, CLI parity and tokenizer.
-The metadata-only probe separately used 10.711/10.909 s wall,
-10.503415/10.664997 s CPU and 842,891,264/853,958,656 B peak cgroup memory.
-All scopes used one CPU, an 8 GiB hard cap, 6 GiB early stop and no swap; cleanup
-was verified with no OOM. Memory includes charged file cache, not summed RSS.
-Counters were observed at payload exit while the observer remained alive.
-Fresh MCP sessions do not establish an OS-cold cache. Shared-host scheduling and
-filesystem/build warmness were uncontrolled; one pair establishes neither a
-performance improvement nor an equivalence bound. Linux x64 static ASAR analysis
-was executed; live Electron and other platforms were not exercised locally.
-[Compact records and source hashes](javascript-analysis-effects-2026-10-15.json)
-preserve these distinctions without archiving the downloadable application.
-
-## Reproduce
-
-Use pinned Node/npm, `npm ci`, then `npm run build:cached`. Run the following as
-an ES module from the checkout root (`node --input-type=module < probe.mjs`):
-
-```javascript
-import assert from "node:assert/strict";
-import { Client } from "@modelcontextprotocol/client";
-import { StdioClientTransport } from "@modelcontextprotocol/client/stdio";
-import { toolAvailabilityInventory } from "./dist/contracts/toolOutputSchemaPrimitives.js";
-import { closeVerifierResources } from "./scripts/lib/verifier-cleanup.mjs";
-
-const client = new Client({
-  name: "javascript-effect-verification",
-  version: "1",
-});
-const transport = new StdioClientTransport({
-  command: process.execPath,
-  args: ["scripts/rea.mjs", "mcp"],
-  stderr: "pipe",
-});
-let primaryError;
-try {
-  await client.connect(transport);
-  transport.stderr?.resume();
-  const { tools } = await client.listTools();
-  const tool = tools.find(
-    ({ name }) => name === "analyze_javascript_application",
-  );
-  assert.ok(tool);
-  const response = await client.callTool({
-    name: "binary_session",
-    arguments: {},
-  });
-  assert.notEqual(response.isError, true);
-  const inventory = toolAvailabilityInventory.parse(
-    response.structuredContent?.result?.tool_availability,
-  );
-  const group = inventory.groups.find(({ names }) => names.includes(tool.name));
-  assert.ok(group);
-  console.log(
-    JSON.stringify({
-      tool: tool.name,
-      advertised_annotations: tool.annotations,
-      session_effects: group.effects,
-      session_annotations: group.annotations,
-      catalog_tool_count: tools.length,
-    }),
-  );
-} catch (cause) {
-  primaryError = cause;
-  throw cause;
-} finally {
-  await closeVerifierResources(
-    [() => client.close(), () => transport.close()],
-    primaryError,
-  );
-}
-```
-
-For the real workflow, follow the artifact acquisition/digest instructions in
-[module-reference verification](javascript-module-references-2026-10-15.md).
-Run its existing command with `--mode references --rounds 1 --cli-parity` and the
-same selected source paths and tokenizer. That verifier is unchanged by this
-fix. The preserved 8 GiB cgroup observer and its source hashes are documented in
-the same guide. The machine-readable records separate metadata-probe resources
-from the complete real-workflow resources.

docs/verification/javascript-interruption-applicability-2026-10-15.md

@@ -1,245 +0,0 @@
-# Interrupted application processing: applicability and Evidence
-
-Tracks #3948 under #4027. Measured baseline:
-`c7f6b8bad1a34d5efb30ff2a017672dea1fcdabb`.
-
-The question is which processing phases remain unavailable after a source
-interruption, while keeping native inventory and already collected facts.
-Native identity and provider linkage must stay independent of application-wide
-partial coverage. This is static artifact analysis; no target application or
-native provider runs.
-
-## Observed failure and correction
-
-The interruption producer previously attached one generic failure to every
-remaining relevant file. Graph projection interpreted it as JavaScript AST work.
-Real Joplin reproduced an `analyze-javascript-source` / `ast-static-analysis`
-unavailable scope on keytar's native binary and on unvisited package, HTML and
-source-map files. Public CLI/MCP controls reproduced the same applicability
-problem. Deterministic cancellation before native metadata additionally produced
-a phantom JavaScript semantic module for the binary.
-
-The producer now records the applicable operation/authority and whether the
-phase was entered. `analysis_status: interrupted` includes worker startup and
-does not imply parsing completed; `not-started` identifies unvisited phases.
-Native add-ons need no post-inventory source-processing phase, so neither interrupted
-nor caller-excluded native files acquire AST scopes or semantic modules.
-Actual JavaScript failures, structured-file unknowns, caller selection and byte
-identity remain available. The graph consumes these produced facts.
-
-The AST-only unavailable Evidence helper is replaced by an explicitly typed
-static helper. Normal package/JSON/map gaps also retain their artifact-byte
-authority. Per-file progress uses the same applicability owner: JavaScript keeps
-its source phase, and metadata uses `process_javascript_artifact_metadata`.
-Remaining parsers do not run after interruption. Failure sharing is limited to
-five applicable phases during one interruption; no persistent cache is added.
-
-A second review found the alternate full-analysis semantic builder still
-created modules for every excluded file kind. An actual filesystem-producer
-regression on revision `323fae8cbf3e36677bcb7b22ba31fa1a7e3c5cd4` reproduced
-phantom native/JSON/HTML/package/source-map modules, while selected and excluded
-JavaScript were positive controls. Semantic applicability now belongs to the
-shared `recordUnavailableFile` projection entry point, before retaining limits,
-nodes, roots or unknowns. Three duplicate caller checks are removed. Both full
-and incremental construction use this boundary; actual excluded JavaScript
-continues to carry source-bound unknowns and partial semantic coverage.
-
-## Real input and reproduction
-
-Use the [official Joplin v3.7.21 acquisition and extraction instructions](https://github.com/morluto/rea/blob/c7f6b8bad1a34d5efb30ff2a017672dea1fcdabb/docs/verification/javascript-native-handoff-identity-2026-10-15.md).
-The AppImage SHA-256 is
-`5d202dcaca31e14206826aa3f04125e7c218dbc3dc3d98479d811efbd6b856c1`;
-ASAR SHA-256 is
-`767df409b18effe60421fbefcca873de237c7e813eac744ecdeebbc5e825a33a`.
-The 6,324-file inventory includes 46 unpacked entries. Both cohorts stage all
-three native companions; the other 43 unpacked entries remain unavailable.
-
-Build with pinned Node 24.18.0/npm 11.16.0 and locked dependencies. The extended
-existing verifier also runs against the baseline runtime; copy the verifier and
-`scripts/lib/javascript-file-scope-oracle.mjs` from the fixed revision into a
-built baseline checkout when reproducing the failure.
-
-```bash
-artifact_path="/absolute/path/to/cases/available/app.asar"
-common=(
-  --artifact "$artifact_path"
-  --addon-path node_modules/keytar/build/Release/keytar.node
-  --native-sha256 0700016bcd761cbe02d275f2046c7cc42f39f730a50d66e3d3307aa9d413373a
-  --source-path ElectronAppWrapper.js
-  --source-path ElectronAppWrapper.js.map
-  --source-path index.html
-  --source-path package.json
-  --source-path node_modules/keytar/build/Release/keytar.node
-  --structured-path ElectronAppWrapper.js.map
-  --structured-path index.html
-  --structured-path package.json
-  --structured-expectations '{"ElectronAppWrapper.js.map":{"operation":"parse-local-source-map","analysis_status":"not-started"},"index.html":{"operation":"parse-html-script-references","analysis_status":"not-started"},"package.json":{"operation":"parse-package-json","analysis_status":"not-started"}}'
-  --rounds 3 --cli-parity
-  --tokenizer-python /absolute/path/to/python-with-tiktoken-0.12.0
-)
-node scripts/verify/javascript/native-handoffs.mjs "${common[@]}" \
-  --analysis-timeout-ms 1 --expect-timeout --require-safe
-node scripts/verify/javascript/native-handoffs.mjs "${common[@]}" \
-  --validate-structured-from-export --require-safe
-```
-
-Omit `--require-safe` on the baseline timeout run to record its incorrect
-applicability. Its diagnostic exit 0 is not a passing analyst task. A supported
-1 ms deadline includes worker startup; the verifier requires a typed timeout
-and retained partial reference for that cohort. Each structured path supplies an
-independent expected operation and phase-entry status; the safety oracle matches
-all gaps exactly, including unavailable state and unknown confidence. Missing or
-conflicting expectations do not pass.
-
-The native path is explicitly selected. An earlier structured-only run excluded
-it and therefore did not reproduce the native interruption. Input selections
-and that preliminary result remain recorded. Both final cohorts preserve
-partial coverage for unselected/unavailable scopes.
-
-The supplied native Evidence is simulated solely to check exact subject linkage.
-The verifier checks physical companion bytes and the exported parent's root
-digest, validates public CLI/MCP native-trace parity, and reports only after
-owned transport/command/private-file cleanup. Applications and large Evidence
-are regenerable and are not archived.
-
-## Two distinct task projections
-
-The **timeout task** includes the expected typed-timeout preparation, one inline
-native trace and three inline structured-path traces. It checks that native has
-no AST failure and that each unvisited structured phase remains unavailable with
-the appropriate artifact-byte authority and `not-started` status.
-
-The **default-deadline control** models the summary plus one inline native trace.
-Its named structured paths are additionally validated from the already exported
-complete parent, explicitly labelled `exported-parent-validation`. Those checks
-are diagnostic overhead outside the modeled native-task tokens and inside total
-verifier resources. They are not presented as inline metadata answers.
-
-A control that also requested the complete outgoing `package.json` feature trace
-hit stdio admission twice: at least 10,587,373 bytes against a 10,484,736-byte
-result budget, with identical retained parent/trace identities. It is not a
-completed equivalent task or an efficiency baseline. [#4190](https://github.com/morluto/rea/issues/4190)
-records the separate need for exact retained metadata/native fact views. Complete
-export remains available. Do not compare costs across these different tasks.
-
-## Measurements
-
-| Cohort                         | Revision |  Wall s |      CPU s | Peak cgroup bytes | Applicability |
-| ------------------------------ | -------- | ------: | ---------: | ----------------: | ------------- |
-| Timeout, four inline traces    | baseline |  60.738 |  60.289464 |     3,092,045,824 | wrong scope   |
-| Timeout, four inline traces    | final    |  57.515 |  57.089883 |     2,763,276,288 | pass          |
-| Default control, native inline | baseline |  61.542 |  61.135522 |     2,808,336,384 | pass          |
-| Default control, native inline | final    | 186.085 | 142.371100 |     2,959,585,280 | pass          |
-
-| Defined task   | Selected catalog + parsed/structured replies BPE | Selected catalog + complete tool replies BPE |
-| -------------- | -----------------------------------------------: | -------------------------------------------: |
-| Timeout        |                                  21,136 → 20,161 |                              36,468 → 34,471 |
-| Native control |                                  11,776 → 11,720 |                              17,738 → 17,632 |
-
-The full-catalog alternatives and per-query samples are preserved in JSON.
-Native content identity, observed byte provenance, source selection and handoff
-provider Evidence remain equal. Corrected global provenance changes derived
-parent/trace identities; null partial-Evidence subjects remain null. Both final
-runs have exact CLI/MCP native-trace parity and match the earlier post-fix
-controls in every recorded non-timing field.
-
-The whole verifier includes input hashing, analysis, three native trace rounds,
-applicable structured queries, export, CLI parity and tokenization. Every heavy
-run uses the preserved [resource observer](https://github.com/morluto/rea/blob/b3bdabab694af1f9801eff7caf75001b92314a58/experiments/analysis-efficiency/resource-run.py):
-one CPU, 8 GiB hard cap, 6 GiB early stop and no swap. Cgroup peaks include charged
-file cache, not summed RSS. Counters are observed at payload exit while the
-observer remains alive, not final whole-scope counters. Completed runs verify
-owned cleanup and report no OOM.
-
-Each MCP process is fresh, but input hashing warms its file cache. Build/OS caches
-and shared-host scheduling are uncontrolled. First and repeated retained-query
-wall samples remain separate; isolated query CPU/memory are unmeasured. An
-earlier fixed timeout took 150.173 s wall / 119.468013 s CPU; its exact unchanged
-runtime repeat took 58.827 s / 58.482996 s, with identical non-timing facts,
-Evidence and BPE. Both receipts are retained. The final default control also took 186.085 s wall / 142.371100 s CPU; its
-unchanged-runtime repeat took 62.651 s / 62.240964 s with identical non-timing
-results. The slow final row remains reported. Attribution remains unresolved;
-these runs establish no speedup or performance-equivalence bound.
-
-The stricter post-review verifier reruns also passed without changing production
-code: timeout 162.645 s wall / 125.876114 s CPU / 2,809,643,008 B peak; default
-control 61.367 s / 60.970077 s / 2,526,949,376 B. Both preserve the original final
-analytical fields, identities, coverage and BPE exactly; only timings and the new
-explicit oracle-input field differ. These additional receipts do not replace the
-slower rows above.
-
-After centralizing semantic applicability, both real public controls passed again:
-timeout 60.443 s wall / 59.970344 s CPU / 3,078,295,552 B peak; default control
-63.574 s / 63.177884 s / 3,189,719,040 B. Analytical results, identities, coverage,
-BPE and exact CLI/MCP parity remain unchanged. JSON identifies the runtime and
-verifier source manifests for each cohort and keeps all earlier receipts.
-
-Static `cl100k_base`/tiktoken 0.12.0 projections include the selected or complete
-name/description/inputSchema catalog, requests and structured Evidence or parsed
-text errors. Complete-tool-reply alternatives include MCP text/structured
-duplication. The selected two-tool catalog is 5,570 BPE; the complete projection
-is 195,522. Output schemas, host rendering/replay, notifications, model reasoning,
-final answers and billing are unmeasured. Repeated rounds, export, CLI parity,
-tokenization and exported-parent diagnostics are validation overhead outside the
-defined task tokens but inside resource receipts. Removing unsupported claims
-from the incorrect timeout baseline earns no efficiency credit.
-
-## Verification and limitations
-
-The initial production fix had 49 distinct passing cases across eight files. The initial
-pre-progress-cleanup seven-file selection passed 44/44. After progress cleanup,
-the same selection passed 43 and hit the existing 30-second test deadline in one
-native identity case; an unchanged two-file rerun passed both native cases and
-five public CLI cancellation cases. The original deadline was not increased.
-The runtime verifier collects interruption-bearing scopes; separate regressions
-cover native caller exclusion and malformed structured data. Source selection,
-malformed structures, actual worker resource constraints,
-retained large partial observations, cancellation/publication/cleanup, native
-identity and both public adapters remain covered.
-
-The first review found that the real verifier previously accepted any non-JavaScript
-operation with artifact-byte authority and ignored phase-entry status. The
-scenario now supplies exact operation/status expectations independently of the
-production phase map. Six additional oracle cases use the actual retained
-Joplin snapshots and reject wrong metadata operations, entered or missing
-statuses, and absent or conflicting gaps. They passed, bringing the distinct
-coverage to 55 cases across nine files. The production implementation did not
-change during this review correction.
-
-After the shared semantic-boundary correction from the second review, 78
-distinct cases passed across ten files: the nine-file selection passed 65/65,
-and the original root reconstruction file passed 13/13. This includes the
-alternate-builder owning test file's 23 cases. The new producer-boundary
-regression checks both construction paths, all five excluded metadata/native
-kinds, and selected/excluded JavaScript controls. Real Joplin controls exercise
-the public incremental workflow; the alternate full-builder path has filesystem
-boundary verification rather than a separately measured real-app workflow.
-
-Recorded attempts also include the verifier's initial non-null-subject assumption
-and an invalid top-level semantic-module-path absence check. Both were corrected
-before their assertions were used as proof. Corrected cancellation reproduction
-shows the actual native AST scope and phantom module on the baseline. Final
-source and execution-driver versions, source pins, input digests, prior attempts
-and resource receipts are in the [compact JSON record](javascript-interruption-applicability-2026-10-15.json).
-
-Before review, `npm run check && npm run docs:check` passed, including five consistency
-tests: 165.553 s wall / 150.247257 s CPU /
-4,232,491,008 B peak cgroup memory, clean owned exit and no OOM.
-The first full check stopped on a 172-line test callback exceeding the 150-line
-rule. A named assertion helper now shares scope lookup across all four public
-results; the strengthened six-case file passed again before the final gates.
-After the review correction, the full static/docs gate passed again, including
-the five consistency tests: 111.395 s wall / 110.979710 s CPU /
-4,347,125,760 B peak, with clean owned exit and no OOM.
-After centralizing semantic applicability, the final full static/docs gate also
-passed, including five consistency tests: 117.636 s wall / 117.194118 s CPU /
-4,263,153,664 B peak, clean owned exit and no OOM.
-
-At the initial PR revision, 36 CI checks passed; macOS `hdiutil create` failed
-while creating its DMG fixture before REA verification, also failing the aggregate
-check. No Apple fixture/workflow code changed. That attempt provides no passing
-Apple runtime evidence.
-
-Live Electron/application execution, real native-provider behavior, other-platform
-runtime coverage and hosted-agent costs are **NOT_ENOUGH_INFO**. The verification
-does not claim them.

docs/verification/javascript-literal-byte-budget-2026-10-15.json

@@ -1,547 +0,0 @@
-{
-  "base_revision": "e9a71efa31d6c3675b67938b8a79fa4ddf01604c",
-  "scope": "Semantic per-value string-byte normalization; real static shipped-application control, no hosted-model performance claim",
-  "runtime": {
-    "platform": "Linux x64",
-    "node": "24.18.0",
-    "npm": "11.16.0",
-    "tiktoken": "0.12.0"
-  },
-  "baseline_source_sha256": {
-    "src/domain/javascript/javascriptSemanticValues.ts": "df3fc30b5ba91901a85fe56f200355930da32d054bb026a747e3414af233b6b5",
-    "src/domain/javascript/javascriptSemanticPrimitives.ts": "c12b29f0faf4b6511777cba7ed8ac007c6d6170d657f01e43e194feacb3e0601",
-    "src/domain/javascript/javascriptSemanticResourceLimits.ts": "0203d207e0d6bb8aaa17746090f008876a11653afd660fce3dc44f3fda646a6c",
-    "scripts/verify/javascript/module-references.mjs": "9d5f0b8b35ed2ebb4591f9dc3baea0fc116a0c3fd7d8e5ce30ec476c84671ed1"
-  },
-  "final_source_sha256": {
-    "scripts/verify/javascript/module-references.mjs": "9d5f0b8b35ed2ebb4591f9dc3baea0fc116a0c3fd7d8e5ce30ec476c84671ed1",
-    "src/application/javascript/JavaScriptSemanticGraphDataProjection.ts": "844d4639401a9f050ce42c80192572a6d0d74fe4f81b37e93a2c20aaca9fb9a6",
-    "src/domain/javascript/javascriptSemanticAnalysis.ts": "a3f802ca3446c2b5376cc58b19d818eff318e6775bd47752793c3f649994f8a2",
-    "src/domain/javascript/javascriptSemanticAnalysis.unions.test.ts": "2e78717d30e637b5fc5bab6d0eff063f7a62e0199d33697c1cdfaf8317baa698",
-    "src/domain/javascript/javascriptSemanticDataEffectHelpers.ts": "8f9cf1a36f05b03dd816eaf9a6cdba0160d34ad7d17a961206e1bc32444d2ccc",
-    "src/domain/javascript/javascriptSemanticDataEffects.ts": "e69408f2f5910a0107fd5d0cae0ff60ed706448857bc8e535c37cac1a0cd4d37",
-    "src/domain/javascript/javascriptSemanticIr.ts": "68dad360d0a9e6bd72108b2717cae756b84ca1efb48455248ded2ff699d2c113",
-    "src/domain/javascript/javascriptSemanticPrimitives.ts": "899eeb6ccdf666f504f8b722327599997c924c8e4fb13a1cbd13edaf08c96640",
-    "src/domain/javascript/javascriptSemanticResourceLimits.ts": "0993a397f2a2a48c2b6c35494e940b3fce5c2c9032cfe33c7cf0401128c79dde",
-    "src/domain/javascript/javascriptSemanticState.ts": "bfcface5dcda22594f47ed390efa15f9140fe41cb2d5995896e52dd0ee31b978",
-    "src/domain/javascript/javascriptSemanticValues.ts": "a4ba51cc60fff38ef11fd5af35a2e1ad753cdb2dea9d44895f91d89320c5ddeb",
-    "tests/acceptance/applications/javascriptEndpointPayload.test.ts": "b3cfcde1c5b5e0698f84afd51f4b53e42e56101267707c20c0d038320f5cfbd2",
-    "tests/boundary/mcp/javascriptLiteralBudget.test.ts": "070106115b482269794799e448bd20b8e02df1f511f4ceb2b8fa75612c7f78e4",
-    "tests/boundary/mcp/javascriptLiteralPayload.test.ts": "03618272c605f8877ed171ab39e037e4d80eac72b7478421640076f739adfb50"
-  },
-  "artifact": {
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-        "baseline_domain_corrected": "2 over-bound failures, 16 passed. Initial combined-run domain assertions had incorrectly required an empty optional resourceLimits array; corrected before using the domain reproduction as evidence.",
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-      "validation": {
-        "original_main": "Quoted/template oversized literals failed through public CLI/MCP; addition/small controls passed. Corrected domain boundary reproduced 2 failures/16 passes.",
-        "review_head": "8 failed/25 passed before fixes for projection tags, encountered-but-discarded limits and bare quoted/template defaults; includes exact null default control.",
-        "interim_review_fix": "65/66 focused passed; old doubling-chain expectation omitted a genuine expression-depth limit now observed. Adjusted that assertion to preserve the byte-limit requirement while allowing other observed classes.",
-        "final_focused": "66 passed in five files.",
-        "final_semantic_suite": "932 passed in 36 files.",
-        "arithmetic": "Computed 174762*6+2=1048574 and 174763*6+2=1048580. Corrected the erroneous published 1048578 total.",
-        "final_grouped_domain": "27 passed after grouping observations/defaults/allocation within function-size rules; no scenarios removed.",
-        "endpoint_review_baseline": "Production at 38d263a: 7 failed/14 passed across 13 new domain and 8 CLI/MCP cases before endpoint normalization. The later public linked-response case was not in this baseline run. Regression tests were uncommitted; final formatted test hashes are preserved, not claimed as the baseline test bytes.",
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-      "validation": {
-        "original_main": "Quoted/template oversized literals failed through public CLI/MCP; addition/small controls passed. Corrected domain boundary reproduced 2 failures/16 passes.",
-        "review_head": "8 failed/25 passed before fixes for projection tags, encountered-but-discarded limits and bare quoted/template defaults; includes exact null default control.",
-        "interim_review_fix": "65/66 focused passed; old doubling-chain expectation omitted a genuine expression-depth limit now observed. Adjusted that assertion to preserve the byte-limit requirement while allowing other observed classes.",
-        "final_focused": "81 passed in six files; the same CLI/MCP file then passed 9/9 after adding a linked-response case. That follow-up replaces its earlier 8-case coverage; 82 distinct cases across the final six-file selection, not one 82-case invocation.",
-        "final_semantic_suite": "945 passed in 37 files, overlapping focused domain coverage.",
-        "arithmetic": "Computed 174762*6+2=1048574 and 174763*6+2=1048580. Corrected the erroneous published 1048578 total.",
-        "final_grouped_domain": "27 passed after grouping observations/defaults/allocation within function-size rules; no scenarios removed.",
-        "endpoint_review_baseline": "Production at 38d263a: 7 failed/14 passed across 13 new domain and 8 CLI/MCP cases before endpoint normalization. The later public linked-response case was not in this baseline run. Regression tests were uncommitted; final formatted test hashes are preserved, not claimed as the baseline test bytes.",
-        "endpoint_selection_attempt": "First six-file selection exited before execution because a signed-zero test filename was mistyped; corrected the exact path. No test result claimed for that attempt.",
-        "endpoint_typecheck_attempt": "Full static gate found the inferred optional dataField in the public test computed key. Replaced the in-property check with an explicit bare === true discriminant; scenario inputs and runtime implementation unchanged. Corrected static/public checks recorded separately.",
-        "final_gates": "Full static gate passed after the explicit test discriminant; final public file passed 9/9 again, then docs gate passed including 5 consistency tests. Runtime implementation unchanged after the 945-test semantic suite and real control."
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-      "ci_failure": {
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-        "test": "tests/acceptance/applications/javascriptEndpointPayload.test.ts",
-        "result": "1 failed/1573 passed/19 skipped; request endpoint no longer matched its complete source value. Other local tests and real Obsidian control passed but did not establish this compatibility contract.",
-        "aggregate_result": "Merged source/built report: 1 failed/15625 passed/138 skipped. Portable tests and CI required failed as aggregates of the same endpoint assertion; no separate additional failed test."
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-    }
-  ],
-  "review_baseline_revision": "40b9d3c5b9cbeae7661d8e351e1b5ef6e5338931",
-  "review_baseline_source_sha256": {
-    "scripts/verify/javascript/module-references.mjs": "9d5f0b8b35ed2ebb4591f9dc3baea0fc116a0c3fd7d8e5ce30ec476c84671ed1",
-    "src/application/javascript/JavaScriptSemanticGraphDataProjection.ts": "ee541e634264363822bf4ce05c42c72272029c7e8da72bbeed643ad1341d0756",
-    "src/domain/javascript/javascriptSemanticAnalysis.ts": "a1cf791a61ee4742c351c006b69b64eba6bef3068f7a8450ed8f9366bfe4ff88",
-    "src/domain/javascript/javascriptSemanticAnalysis.unions.test.ts": "747d893d6ddd91cf24d3b62b7eb50e0af9b1715ab355bbfc2e10ed0dc171ec17",
-    "src/domain/javascript/javascriptSemanticDataEffectHelpers.ts": "5ee7af18dd847726d8fe1828ea25f386ff9ef317d996a3f7969253bf73973cfa",
-    "src/domain/javascript/javascriptSemanticDataEffects.ts": "4c62462016246bc7198294a74a60e87598fc009c53f1601abc2d4662d41b5bd1",
-    "src/domain/javascript/javascriptSemanticIr.ts": "14955cb4b7912ed6a4f26f804a2480f841dcb6084dbddd15856375fa62cdcfa1",
-    "src/domain/javascript/javascriptSemanticPrimitives.ts": "899eeb6ccdf666f504f8b722327599997c924c8e4fb13a1cbd13edaf08c96640",
-    "src/domain/javascript/javascriptSemanticResourceLimits.ts": "0203d207e0d6bb8aaa17746090f008876a11653afd660fce3dc44f3fda646a6c",
-    "src/domain/javascript/javascriptSemanticState.ts": "d94c5a88bb105284fab192406a8c88860d59f80c93394ed3ee7264969df254a6",
-    "src/domain/javascript/javascriptSemanticValues.ts": "2debbb4f32d7d189819f2413f0f7d05b9bdcf497451a1c578475e3f2ec6c8554",
-    "tests/boundary/mcp/javascriptLiteralBudget.test.ts": "46ceb5a169de3eec3a335b05ef4aa7b1b341a5ac06ad325bd191e862c5b6be70",
-    "tests/boundary/mcp/javascriptLiteralPayload.test.ts": "03618272c605f8877ed171ab39e037e4d80eac72b7478421640076f739adfb50"
-  },
-  "implementation": "Per-analysis state records encountered resource classifications at expression/default normalization; final coverage consumes those facts. Slot projection preserves tagged unknown values. Removed retained-value recursive coverage scan and duplicate raw default reader. Defaults retain optional valueResourceLimit and graph value_resource_limit plus an anchored resource-limit unknown; known null/false/0/empty remain exact. Endpoint identities intentionally remain exact lookup values, outside the normalized primitive lattice; rejected endpoint normalization and its CI failure are preserved separately.",
-  "restored_production_revision": "38d263a369e7853ccfae1c8e0a3bd387f920c7cf",
-  "final_corrected_resource_receipts": {
-    "public_7": {
-      "elapsed_seconds": 43.621,
-      "cpu_seconds": 43.097453,
-      "peak_cgroup_bytes": 1520324608,
-      "payload_cleanup_verified": true,
-      "events_at_payload_exit": {
-        "memory.events": {
-          "low": 0,
-          "high": 0,
-          "max": 0,
-          "oom": 0,
-          "oom_kill": 0,
-          "oom_group_kill": 0
-        },
-        "pids.events": {
-          "max": 0
-        }
-      }
-    },
-    "static_and_docs": {
-      "elapsed_seconds": 111.403,
-      "cpu_seconds": 110.830839,
-      "peak_cgroup_bytes": 4268244992,
-      "payload_cleanup_verified": true,
-      "events_at_payload_exit": {
-        "memory.events": {
-          "low": 0,
-          "high": 0,
-          "max": 0,
-          "oom": 0,
-          "oom_kill": 0,
-          "oom_group_kill": 0
-        },
-        "pids.events": {
-          "max": 0
-        }
-      }
-    }
-  }
-}

docs/verification/javascript-literal-byte-budget-2026-10-15.md

@@ -1,86 +0,0 @@
-# Semantic literal byte-budget verification
-
-Tracks #3933 under #4027. All normalized semantic literals and configuration
-defaults use the primitive owner. Its singleton path validates strings/nonfinite
-numbers/negative zero without a Set, sorting or canonical-key serialization.
-Each source analysis owns a bounded set of encountered limit classifications;
-coverage consumes these observations after evaluation. This replaces a recursive
-scan that only saw retained binding/return values. No persistent cache is added.
-
-## Correctness and coverage
-
-Public CLI and actual stdio MCP cases cover quoted strings, cooked templates,
-equivalent concatenation, member receivers, a configuration-only expression
-statement and a small exact control. Direct/default oversized values become
-`resource-limit` unknowns with partial application coverage and
-`javascript_semantic_primitive_bytes = 1048576`. Defaults carry
-`value_resource_limit` inline and an unknown anchored to their config node.
-Known null/false/zero/empty defaults remain exact. Original source/digests and
-CLI/MCP identity parity are preserved.
-
-Member and destructuring projections use the shared slot owner's tagged value.
-An encountered limit stays visible even when a subsequent projection selects a
-healthy sibling: the selected value remains exactly `7`, while file coverage is
-partial. This avoids inferring completeness from the final retained values alone.
-The duplicate raw default reader and superseded retained-value scan are removed.
-
-Boundary controls admit 174,762 UTF-16 units (1,048,574 estimated JSON bytes)
-and reject 174,763 (1,048,580 bytes). Actual arithmetic corrected the earlier
-published 1,048,578 total; the unit-count boundary assertions were already correct.
-The estimate counts six bytes per unit plus two quotes. It does not establish
-actual ASCII JSON size above 1 MiB or an observed OOM.
-
-The initial main baseline reproduced both public literal failures, with addition
-and small controls passing. A mistaken optional-limit-array control was corrected
-before the separate domain reproduction (2 failed/16 passed). Review head
-`40b9d3c5` then reproduced the additional projection/default gaps (8 failed,
-25 passed). The first review correction passed 65/66 focused tests; a doubling
-chain now truthfully retains an additional encountered expression-depth limit,
-so its byte-growth assertion was updated to allow other recorded limits.
-Prior validation on the restored runtime: **66 focused tests** in five files and **932 semantic tests**
-in 36 files, with overlapping domain coverage. The large-wire fixture retains
-16 individually admitted values and at least the former aggregate UTF-16 payload,
-plus complete CLI/MCP delivery, typed identities, empty strings and retained
-tracing. Inputs regenerate from the tests.
-
-## Endpoint identity compatibility
-
-An attempted endpoint normalization at `5808872` passed its new local cases and real Obsidian control, but failed the existing CI endpoint-payload acceptance workflow (1 failed/1,573 passed/19 skipped in that shard). It violated the established full endpoint lookup/trace contract. This extension was reverted; endpoint values are lookup identities, outside the normalized primitive lattice. The original large endpoint is preserved. Corrected public validation passed **7/7** across two files; this adds one acceptance workflow to the previous 66-case focused selection (**67 distinct cases**, not one 67-case invocation). Its acceptance workflow now also normalizes that identical string as an exported primitive, requiring the typed value bound while endpoint lookup, both trace workflows and version comparison remain usable. Prior measurements and failed attempts remain in the JSON record. Production source is restored byte-identical to `38d263a`; the 932-test semantic run belongs to that state. Final full static and documentation gates (five consistency tests) passed after the compatibility correction.
-
-## Real application control and costs
-
-Official Obsidian 1.14.4 ASAR, selected `package.json` and `main.js`. Follow the
-acquisition/digest and existing verifier command in
-[module-reference verification](javascript-module-references-2026-10-15.md).
-Use three alternating-order query pairs with CLI parity on each revision.
-Application code is not executed.
-
-The final correction retains the exact baseline full parent/view Evidence IDs,
-23-row fact digest, source coverage and unknowns. Static `cl100k_base` task costs
-remain 16,548 with selected name/description/inputSchema contracts, or 204,093
-with the full catalog projection, for the reference workflow. Serial legacy
-reads also keep their original costs. The query projection improvement belongs
-to #4097; these are controls for semantic normalization and coverage.
-
-| Complete real verifier |        Before | Final correction |
-| ---------------------- | ------------: | ---------------: |
-| Elapsed seconds        |        33.394 |           32.949 |
-| CPU seconds            |     33.016802 |        32.559187 |
-| Peak cgroup bytes      | 1,979,863,040 |    1,880,096,768 |
-
-Includes initial analysis, both query arms, export, CLI parity and tokenizer.
-One CPU, 8 GiB hard cap, 6 GiB early stop, no swap; cleanup verified and no OOM.
-Memory includes charged file cache, not summed RSS. Counters are at payload exit
-while the observer remains alive. Fresh MCP sessions do not establish OS-cold
-cache conditions. Shared-host scheduling and filesystem/build warmness were
-uncontrolled. This one before/after control establishes neither a speedup nor
-an equivalence bound. Static BPE excludes annotations/output schemas, client
-rendering/replay, reasoning and final answers; no hosted agent was run. Linux
-static ASAR analysis was exercised, not live Electron or other platforms.
-
-[Compact records, samples, source hashes and prior attempts](javascript-literal-byte-budget-2026-10-15.json)
-preserve the initial incomplete correction separately from the final measurements.
-No downloadable application or complete bundle is archived. Reproduce boundary
-outcomes through the listed public tests and reuse the existing real verifier
-and preserved 8 GiB observer linked above. Observer hashes and result-affecting
-touched source hashes are pinned in the records.

docs/verification/javascript-module-references-2026-10-15.json

@@ -1,691 +0,0 @@
-{
-  "base_revision": "c9f9b83c6f5878f1d5b102ab206a2ce214749258",
-  "source_sha256": {
-    "scripts/verify/javascript/module-references.mjs": "9d5f0b8b35ed2ebb4591f9dc3baea0fc116a0c3fd7d8e5ce30ec476c84671ed1",
-    "src/contracts/analysisViewToolContracts.ts": "f7c64b3472e7ec1090f9d47ede864b8c9630d506d896454a800747f2c90a8960",
-    "src/domain/analysisView/analysisView.ts": "854b03988791c19642b01d17813b379b51d8edc10d2190a3c236c9a1b2feb365",
-    "src/domain/analysisView/javascriptApplicationView.ts": "f2c41ad15fdc9f891412c9161a832b60baf3dae55e3c4d60159098d07f7d1ef1",
-    "src/domain/analysisView/javascriptModuleReferences.ts": "34c7a7ff466e9c49d43f1b11b72f878041de61a1bc09086ec190a5833b454806",
-    "scripts/fixtures/tokenizer-family-wrapper.py": "2e9b7092ee539ae1c6a477492f05bb6007d4612dadfff9b90051d621de43049b"
-  },
-  "verification": {
-    "scope": "Completed module-fact reads from identical retained Evidence; no hosted-model performance claim",
-    "artifact": {
-      "path": "/tmp/rea-codemode-experiment-20261015/artifacts/obsidian-1.14.4.asar",
-      "sha256": "146ef8470d8cbb4a6db209bdc19bf2bad13350444186c0fd93c31087b142b92f"
-    },
-    "parent_evidence_id": "ev_73ef06e3b9b944f54c5257f7960279127d8518d2a73cd8618bd045dbe44e6b5a",
-    "source_selection": {
-      "requested_paths": ["package.json", "main.js"],
-      "unselected_files": 36
-    },
-    "source_coverage": {
-      "application": {
-        "status": "partial",
-        "truncated": false,
-        "omitted_count": null,
-        "limits": []
-      },
-      "semantic": {
-        "status": "partial",
-        "truncated": false,
-        "omitted_nodes": null,
-        "omitted_relations": null,
-        "limits": [],
-        "families": [
-          {
-            "family": "boundary",
-            "status": "partial",
-            "retained_relations": 14,
-            "omitted_relations": null,
-            "unknown_count": 31
-          },
-          {
-            "family": "call-flow",
-            "status": "partial",
-            "retained_relations": 845,
-            "omitted_relations": null,
-            "unknown_count": 1278
-          },
-          {
-            "family": "child-process",
-            "status": "partial",
-            "retained_relations": 0,
-            "omitted_relations": null,
-            "unknown_count": 31
-          },
-          {
-            "family": "closure",
-            "status": "partial",
-            "retained_relations": 1187,
-            "omitted_relations": null,
-            "unknown_count": 31
-          },
-          {
-            "family": "configuration",
-            "status": "partial",
-            "retained_relations": 0,
-            "omitted_relations": null,
-            "unknown_count": 31
-          },
-          {
-            "family": "data-flow",
-            "status": "partial",
-            "retained_relations": 9388,
-            "omitted_relations": null,
-            "unknown_count": 1135
-          },
-          {
-            "family": "event",
-            "status": "partial",
-            "retained_relations": 127,
-            "omitted_relations": null,
-            "unknown_count": 89
-          },
-          {
-            "family": "object-flow",
-            "status": "partial",
-            "retained_relations": 1462,
-            "omitted_relations": null,
-            "unknown_count": 2292
-          },
-          {
-            "family": "promise-ownership",
-            "status": "partial",
-            "retained_relations": 80,
-            "omitted_relations": null,
-            "unknown_count": 98
-          },
-          {
-            "family": "request",
-            "status": "partial",
-            "retained_relations": 0,
-            "omitted_relations": null,
-            "unknown_count": 31
-          },
-          {
-            "family": "resource-lifecycle",
-            "status": "partial",
-            "retained_relations": 4,
-            "omitted_relations": null,
-            "unknown_count": 31
-          },
-          {
-            "family": "timer",
-            "status": "partial",
-            "retained_relations": 8,
-            "omitted_relations": null,
-            "unknown_count": 31
-          }
-        ]
-      },
-      "application_unknowns": 36,
-      "semantic_unknowns": 5109
-    },
-    "where": {
-      "path": "main.js",
-      "kind": "javascript-module"
-    },
-    "preparation_ms": 20978.249922,
-    "samples": [
-      {
-        "round": 0,
-        "mode": "legacy",
-        "elapsed_ms": 363.02500200000213,
-        "calls": 24,
-        "structured_reply_bytes": 325201,
-        "facts_sha256": "d3be5e91d2ec3fd9a95851cfbbdef9c168bb4c7153f78810b8b235e005401299",
-        "matching_modules": 23,
-        "coverage": {
-          "status": "page",
-          "examined": 55,
-          "total": 55,
-          "next_offset": null,
-          "exhausted": true
-        }
-      },
-      {
-        "round": 0,
-        "mode": "references",
-        "elapsed_ms": 14.895039999999426,
-        "calls": 1,
-        "structured_reply_bytes": 22158,
-        "facts_sha256": "d3be5e91d2ec3fd9a95851cfbbdef9c168bb4c7153f78810b8b235e005401299",
-        "matching_modules": 23,
-        "coverage": {
-          "status": "page",
-          "examined": 23,
-          "total": 23,
-          "next_offset": null,
-          "exhausted": true
-        }
-      },
-      {
-        "round": 1,
-        "mode": "references",
-        "elapsed_ms": 12.951290000000881,
-        "calls": 1,
-        "structured_reply_bytes": 22158,
-        "facts_sha256": "d3be5e91d2ec3fd9a95851cfbbdef9c168bb4c7153f78810b8b235e005401299",
-        "matching_modules": 23,
-        "coverage": {
-          "status": "page",
-          "examined": 23,
-          "total": 23,
-          "next_offset": null,
-          "exhausted": true
-        }
-      },
-      {
-        "round": 1,
-        "mode": "legacy",
-        "elapsed_ms": 232.7533779999976,
-        "calls": 24,
-        "structured_reply_bytes": 325201,
-        "facts_sha256": "d3be5e91d2ec3fd9a95851cfbbdef9c168bb4c7153f78810b8b235e005401299",
-        "matching_modules": 23,
-        "coverage": {
-          "status": "page",
-          "examined": 55,
-          "total": 55,
-          "next_offset": null,
-          "exhausted": true
-        }
-      },
-      {
-        "round": 2,
-        "mode": "legacy",
-        "elapsed_ms": 235.16672899999685,
-        "calls": 24,
-        "structured_reply_bytes": 325201,
-        "facts_sha256": "d3be5e91d2ec3fd9a95851cfbbdef9c168bb4c7153f78810b8b235e005401299",
-        "matching_modules": 23,
-        "coverage": {
-          "status": "page",
-          "examined": 55,
-          "total": 55,
-          "next_offset": null,
-          "exhausted": true
-        }
-      },
-      {
-        "round": 2,
-        "mode": "references",
-        "elapsed_ms": 10.566158999998152,
-        "calls": 1,
-        "structured_reply_bytes": 22158,
-        "facts_sha256": "d3be5e91d2ec3fd9a95851cfbbdef9c168bb4c7153f78810b8b235e005401299",
-        "matching_modules": 23,
-        "coverage": {
-          "status": "page",
-          "examined": 23,
-          "total": 23,
-          "next_offset": null,
-          "exhausted": true
-        }
-      }
-    ],
-    "token_costs": {
-      "tokenizer": "cl100k_base",
-      "tiktoken_version": "0.12.0",
-      "costs": {
-        "legacy": {
-          "selected_catalog": 7977,
-          "full_catalog": 195446,
-          "common_request": 53,
-          "common_summary": 2675,
-          "requests": 2836,
-          "structured_replies": 71761,
-          "selected_catalog_task_total": 85302,
-          "full_catalog_task_total": 272771
-        },
-        "references": {
-          "selected_catalog": 7977,
-          "full_catalog": 195446,
-          "common_request": 53,
-          "common_summary": 2675,
-          "requests": 102,
-          "structured_replies": 5741,
-          "selected_catalog_task_total": 16548,
-          "full_catalog_task_total": 204017
-        }
-      }
-    },
-    "cli_parity": {
-      "evidence_id": "ev_b3586dfdf7d4f01157f8f2978326aaa7103987110f2df4fa5bf3331ff2898749",
-      "facts_sha256": "d3be5e91d2ec3fd9a95851cfbbdef9c168bb4c7153f78810b8b235e005401299",
-      "exact_cli_mcp_view_parity": true
-    },
-    "conditions": "First query is after shared artifact analysis; subsequent queries share one MCP session. Legacy item reads are serial; a concurrent legacy baseline is unmeasured. Filesystem/build warmness uncontrolled. Token costs count one post-change catalog, preparation request/summary and each request/structured reply once; client rendering, replay, reasoning, final answer and model latency are unmeasured. Preparation and parity/tokenization overhead are outside per-query elapsed times; external family-resource receipts include the complete verifier and children."
-  },
-  "resources": {
-    "scope": "Complete verifier, MCP/analysis descendants, temporary export, CLI parity and tokenizer; cgroup memory includes charged file cache and is not summed RSS",
-    "elapsed_seconds": 35.797,
-    "cpu_seconds": 35.197074,
-    "peak_cgroup_bytes": 1938313216,
-    "memory_max_bytes": 8589934592,
-    "memory_early_stop_bytes": 6442450944,
-    "cpu_quota_percent": 100,
-    "payload_exit_code": 0,
-    "payload_cleanup_verified": true,
-    "events_at_payload_exit": {
-      "memory.events": {
-        "low": 0,
-        "high": 0,
-        "max": 0,
-        "oom": 0,
-        "oom_kill": 0,
-        "oom_group_kill": 0
-      },
-      "pids.events": {
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-    },
-    "observer_sources_sha256": {
-      "resource-run.py": "7728862171415e7dee2c11af2ead2b9a54265fccaf82a7113956d36b29065e33",
-      "resource_payload.py": "6f089e645459eba80c5d73e39c21606c78173a44daf49fabc3b88c4631ce51c6"
-    }
-  },
-  "prior_attempts": [
-    {
-      "scope": "Initial verifier incorrectly requested full MCP delivery; completed analysis exceeded existing response admission",
-      "elapsed_seconds": 21.971,
-      "cpu_seconds": 21.78546,
-      "peak_cgroup_bytes": 1080860672,
-      "outcome": "resource_constraint transport; verifier corrected to summary-first; no performance credit"
-    },
-    {
-      "scope": "Interim successful parity run before eliminating verifier assertion serialization and counting the bootstrap request",
-      "elapsed_seconds": 31.335,
-      "cpu_seconds": 31.07044,
-      "peak_cgroup_bytes": 1652293632,
-      "outcome": "parity passed; superseded measurement, not pooled with final samples"
-    },
-    {
-      "scope": "Successful three-pair probe before adding the shared analyze_javascript_application schema to selected-catalog accounting",
-      "preparation_ms": 18317.110148,
-      "samples": [
-        {
-          "round": 0,
-          "mode": "legacy",
-          "elapsed_ms": 313.59318599999824,
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-            "next_offset": null,
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-          }
-        },
-        {
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-        },
-        {
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-        },
-        {
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-        },
-        {
-          "round": 2,
-          "mode": "legacy",
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-        },
-        {
-          "round": 2,
-          "mode": "references",
-          "elapsed_ms": 13.734700000000885,
-          "calls": 1,
-          "structured_reply_bytes": 22158,
-          "facts_sha256": "d3be5e91d2ec3fd9a95851cfbbdef9c168bb4c7153f78810b8b235e005401299",
-          "matching_modules": 23,
-          "coverage": {
-            "status": "page",
-            "examined": 23,
-            "total": 23,
-            "next_offset": null,
-            "exhausted": true
-          }
-        }
-      ],
-      "elapsed_seconds": 31.037,
-      "cpu_seconds": 30.786998,
-      "peak_cgroup_bytes": 1886543872,
-      "outcome": "Facts and CLI/MCP parity passed. Selected-catalog totals omitted the common analysis-tool schema; superseded, not pooled. Shared-host timing differed substantially from the final run."
-    },
-    {
-      "scope": "Completed three-pair probe with full token accounting before the review-added tokenizer deadline",
-      "preparation_ms": 66696.731143,
-      "samples": [
-        {
-          "round": 0,
-          "mode": "legacy",
-          "elapsed_ms": 1114.080965000001,
-          "calls": 24,
-          "structured_reply_bytes": 325201,
-          "facts_sha256": "d3be5e91d2ec3fd9a95851cfbbdef9c168bb4c7153f78810b8b235e005401299",
-          "matching_modules": 23,
-          "coverage": {
-            "status": "page",
-            "examined": 55,
-            "total": 55,
-            "next_offset": null,
-            "exhausted": true
-          }
-        },
-        {
-          "round": 0,
-          "mode": "references",
-          "elapsed_ms": 46.572758999987855,
-          "calls": 1,
-          "structured_reply_bytes": 22158,
-          "facts_sha256": "d3be5e91d2ec3fd9a95851cfbbdef9c168bb4c7153f78810b8b235e005401299",
-          "matching_modules": 23,
-          "coverage": {
-            "status": "page",
-            "examined": 23,
-            "total": 23,
-            "next_offset": null,
-            "exhausted": true
-          }
-        },
-        {
-          "round": 1,
-          "mode": "references",
-          "elapsed_ms": 37.09324900001229,
-          "calls": 1,
-          "structured_reply_bytes": 22158,
-          "facts_sha256": "d3be5e91d2ec3fd9a95851cfbbdef9c168bb4c7153f78810b8b235e005401299",
-          "matching_modules": 23,
-          "coverage": {
-            "status": "page",
-            "examined": 23,
-            "total": 23,
-            "next_offset": null,
-            "exhausted": true
-          }
-        },
-        {
-          "round": 1,
-          "mode": "legacy",
-          "elapsed_ms": 675.7124039999908,
-          "calls": 24,
-          "structured_reply_bytes": 325201,
-          "facts_sha256": "d3be5e91d2ec3fd9a95851cfbbdef9c168bb4c7153f78810b8b235e005401299",
-          "matching_modules": 23,
-          "coverage": {
-            "status": "page",
-            "examined": 55,
-            "total": 55,
-            "next_offset": null,
-            "exhausted": true
-          }
-        },
-        {
-          "round": 2,
-          "mode": "legacy",
-          "elapsed_ms": 777.2660329999926,
-          "calls": 24,
-          "structured_reply_bytes": 325201,
-          "facts_sha256": "d3be5e91d2ec3fd9a95851cfbbdef9c168bb4c7153f78810b8b235e005401299",
-          "matching_modules": 23,
-          "coverage": {
-            "status": "page",
-            "examined": 55,
-            "total": 55,
-            "next_offset": null,
-            "exhausted": true
-          }
-        },
-        {
-          "round": 2,
-          "mode": "references",
-          "elapsed_ms": 36.31178899999941,
-          "calls": 1,
-          "structured_reply_bytes": 22158,
-          "facts_sha256": "d3be5e91d2ec3fd9a95851cfbbdef9c168bb4c7153f78810b8b235e005401299",
-          "matching_modules": 23,
-          "coverage": {
-            "status": "page",
-            "examined": 23,
-            "total": 23,
-            "next_offset": null,
-            "exhausted": true
-          }
-        }
-      ],
-      "elapsed_seconds": 108.372,
-      "cpu_seconds": 81.551676,
-      "peak_cgroup_bytes": 1884962816,
-      "outcome": "All facts/costs and CLI/MCP parity passed. Superseded execution source after adding a tokenizer deadline; retained separately, not pooled."
-    },
-    {
-      "scope": "Successful data comparison with direct-child tokenizer timeout before adopting shared owned-process supervision",
-      "preparation_ms": 19051.368892000002,
-      "samples": [
-        {
-          "round": 0,
-          "mode": "legacy",
-          "elapsed_ms": 330.7313439999998,
-          "calls": 24,
-          "structured_reply_bytes": 325201,
-          "facts_sha256": "d3be5e91d2ec3fd9a95851cfbbdef9c168bb4c7153f78810b8b235e005401299",
-          "matching_modules": 23,
-          "coverage": {
-            "status": "page",
-            "examined": 55,
-            "total": 55,
-            "next_offset": null,
-            "exhausted": true
-          }
-        },
-        {
-          "round": 0,
-          "mode": "references",
-          "elapsed_ms": 13.62184999999954,
-          "calls": 1,
-          "structured_reply_bytes": 22158,
-          "facts_sha256": "d3be5e91d2ec3fd9a95851cfbbdef9c168bb4c7153f78810b8b235e005401299",
-          "matching_modules": 23,
-          "coverage": {
-            "status": "page",
-            "examined": 23,
-            "total": 23,
-            "next_offset": null,
-            "exhausted": true
-          }
-        },
-        {
-          "round": 1,
-          "mode": "references",
-          "elapsed_ms": 12.475999999998749,
-          "calls": 1,
-          "structured_reply_bytes": 22158,
-          "facts_sha256": "d3be5e91d2ec3fd9a95851cfbbdef9c168bb4c7153f78810b8b235e005401299",
-          "matching_modules": 23,
-          "coverage": {
-            "status": "page",
-            "examined": 23,
-            "total": 23,
-            "next_offset": null,
-            "exhausted": true
-          }
-        },
-        {
-          "round": 1,
-          "mode": "legacy",
-          "elapsed_ms": 187.18667300000016,
-          "calls": 24,
-          "structured_reply_bytes": 325201,
-          "facts_sha256": "d3be5e91d2ec3fd9a95851cfbbdef9c168bb4c7153f78810b8b235e005401299",
-          "matching_modules": 23,
-          "coverage": {
-            "status": "page",
-            "examined": 55,
-            "total": 55,
-            "next_offset": null,
-            "exhausted": true
-          }
-        },
-        {
-          "round": 2,
-          "mode": "legacy",
-          "elapsed_ms": 293.4882039999975,
-          "calls": 24,
-          "structured_reply_bytes": 325201,
-          "facts_sha256": "d3be5e91d2ec3fd9a95851cfbbdef9c168bb4c7153f78810b8b235e005401299",
-          "matching_modules": 23,
-          "coverage": {
-            "status": "page",
-            "examined": 55,
-            "total": 55,
-            "next_offset": null,
-            "exhausted": true
-          }
-        },
-        {
-          "round": 2,
-          "mode": "references",
-          "elapsed_ms": 8.146389999998064,
-          "calls": 1,
-          "structured_reply_bytes": 22158,
-          "facts_sha256": "d3be5e91d2ec3fd9a95851cfbbdef9c168bb4c7153f78810b8b235e005401299",
-          "matching_modules": 23,
-          "coverage": {
-            "status": "page",
-            "examined": 23,
-            "total": 23,
-            "next_offset": null,
-            "exhausted": true
-          }
-        }
-      ],
-      "elapsed_seconds": 30.742,
-      "cpu_seconds": 30.425218,
-      "peak_cgroup_bytes": 1592938496,
-      "outcome": "Fact and cost parity passed. That harness only killed its immediate tokenizer child; superseded by process-family supervision and detached-helper verification."
-    }
-  ],
-  "prior_tokenizer_timeout_verifications": [
-    {
-      "artifact_sha256": "146ef8470d8cbb4a6db209bdc19bf2bad13350444186c0fd93c31087b142b92f",
-      "scenario": "Real Obsidian references plus CLI parity, then a deliberately stalled tokenizer",
-      "injected_tokenizer_source": "#!/bin/sh\nexec /bin/sleep 30\n",
-      "timeout_ms": 20,
-      "observed_error_code": "ETIMEDOUT",
-      "expected_payload_exit_code": 1,
-      "payload_cleanup_verified": true,
-      "remaining_owned_temporary_files": 0,
-      "elapsed_seconds": 31.258,
-      "cpu_seconds": 31.00025,
-      "peak_cgroup_bytes": 1644077056,
-      "events_at_payload_exit": {
-        "memory.events": {
-          "low": 0,
-          "high": 0,
-          "max": 0,
-          "oom": 0,
-          "oom_kill": 0,
-          "oom_group_kill": 0
-        },
-        "pids.events": {
-          "max": 0
-        }
-      },
-      "scope": "Robustness check; no efficiency credit",
-      "limitation": "Immediate child only; did not test detached descendants and is superseded by the owned-family check."
-    }
-  ],
-  "tokenizer_timeout_verification": {
-    "artifact_sha256": "146ef8470d8cbb4a6db209bdc19bf2bad13350444186c0fd93c31087b142b92f",
-    "scenario": "Real Obsidian references and CLI parity, then an owned tokenizer wrapper with a detached SIGTERM-ignoring helper",
-    "fixture": "scripts/fixtures/tokenizer-family-wrapper.py",
-    "fixture_sha256": "2e9b7092ee539ae1c6a477492f05bb6007d4612dadfff9b90051d621de43049b",
-    "timeout_ms": 2000,
-    "observed_failure_type": "OwnedCommandFailure",
-    "observed_reason": "timeout",
-    "cleanup_failure": null,
-    "expected_payload_exit_code": 1,
-    "payload_cleanup_verified": true,
-    "remaining_owned_temporary_files": 0,
-    "helper_observation": {
-      "pid": 2871108,
-      "group": 2871108,
-      "parent": 2871107,
-      "run_id": "rea-module-token-f139b74a-dd83-498b-b663-e765104159ec",
-      "detached": true,
-      "ignores_sigterm": true
-    },
-    "elapsed_seconds": 55.08,
-    "cpu_seconds": 45.245603,
-    "peak_cgroup_bytes": 1563475968,
-    "events_at_payload_exit": {
-      "memory.events": {
-        "low": 0,
-        "high": 0,
-        "max": 0,
-        "oom": 0,
-        "oom_kill": 0,
-        "oom_group_kill": 0
-      },
-      "pids.events": {
-        "max": 0
-      }
-    },
-    "scope": "Robustness check; no efficiency credit. PIDs are observations; signaling authority comes from the shared process owner."
-  }
-}

docs/verification/javascript-module-references-2026-10-15.md

@@ -1,123 +0,0 @@
-# Retained JavaScript module-reference verification
-
-Tracks #4092 under #4027 and the decision in #4091. This verifies an existing
-tool's data projection, without a code-mode host or SDK. [Machine-readable
-results](javascript-module-references-2026-10-15.json) pin the base revision,
-executed source hashes, samples, tokenizer and resource observations.
-
-## Real application and question
-
-Official Obsidian 1.14.4 ASAR, 27,477,966 bytes, SHA-256
-`146ef8470d8cbb4a6db209bdc19bf2bad13350444186c0fd93c31087b142b92f`.
-The [official gzip](https://github.com/obsidianmd/obsidian-releases/releases/download/v1.14.4/obsidian-1.14.4.asar.gz)
-has SHA-256 `d1ed428c363968774f0f3906e67d8a53a058ece0b6cdd924b07865977b2ada21`.
-Select `package.json` and `main.js`; the other 36 inventoried files remain
-explicitly unselected. No target code is executed.
-
-Question: retrieve every retained `javascript-module` identity at exact path
-`main.js`, its retained source-range observation count, and distinct support
-states. Compare the existing module page plus full item reads with one filtered
-typed reference view. All six completed query samples use one identical retained
-parent. All 23 selected rows, identities, counts and support states match. Public
-CLI inline input and MCP retained input produce the exact same view and Evidence
-ID. This establishes producer-fact consistency, not independent extractor
-correctness or proof of runtime loading.
-
-## Completed read costs
-
-| Measurement                                                   | Existing page + items | Typed reference view |
-| ------------------------------------------------------------- | --------------------: | -------------------: |
-| Calls per query task                                          |                    24 |                    1 |
-| Structured reply bytes                                        |               325,201 |               22,158 |
-| First query in its arm, after preparation                     |             363.03 ms |             14.90 ms |
-| Subsequent same-session query times                           |    232.75 / 235.17 ms |     12.95 / 10.57 ms |
-| Request + structured-reply BPE tokens                         |                74,597 |                5,843 |
-| With selected tool catalog + shared bootstrap request/summary |                85,302 |               16,548 |
-| With complete tool catalog + shared bootstrap request/summary |               272,771 |              204,017 |
-
-Order alternates: existing/reference, reference/existing, existing/reference.
-Times include verifier-side fact normalization and equality checks; byte/token
-accounting follows the timed reads. The initial artifact analysis and summary
-took 20.978 seconds and is shared preparation, not a query-speed improvement.
-The retained source remains partial; unknown counts and source selection are
-preserved independently of exhausted pages. No query cache was introduced.
-
-Tokens are `cl100k_base` counts with tiktoken 0.12.0 over serialized values, not
-hosted-model usage. Catalog projections contain name/description/inputSchema;
-both workflows use the same post-change catalog. Each request/reply is counted
-once. Output schemas, host-specific rendering/replay, reasoning, final answers,
-agent success rates and model latency are unmeasured. This is a completed
-data-retrieval comparison; it does not establish a whole-agent speedup or a
-before/after catalog-size improvement. Legacy item reads are serial; a concurrent
-legacy baseline was not measured. Selected discovery includes both the
-analysis and view tool schemas. Builds/filesystem are warm or uncontrolled,
-so the first query is not an OS-cold analysis measurement. Shared-host scheduling
-was uncontrolled: an earlier successful probe had substantially higher wall/CPU
-times. Its samples are retained separately; neither run establishes a portable
-latency guarantee.
-
-The complete final verifier scope used 35.797 seconds elapsed, 35.197 seconds
-CPU and 1,938,313,216 bytes peak cgroup memory. This includes shared analysis,
-both query arms, temporary export, CLI parity and tokenization; CPU/memory were
-not isolated by arm. Cgroup memory includes charged file cache and is not summed
-process RSS. The whole scope had one CPU, an 8 GiB hard memory cap, 6 GiB early
-stop and no swap. Payload cleanup was verified; no OOM/capacity event occurred.
-An earlier full-response transport failure and interim probes are recorded
-separately in the JSON and earn no performance credit.
-
-A review follow-up exercised a stalled tokenizer after real Obsidian reference
-reads and CLI parity. The committed POSIX fault fixture forks a helper into a
-separate process group, ignores SIGTERM and stalls. With a caller-selected
-2,000 ms deadline, the shared owned-command supervisor reported
-`OwnedCommandFailure` with reason `timeout` and no cleanup failure. The verifier
-failed as expected, its complete owned scope was cleaned, and its selected
-temporary root was empty. The separate robustness run used 55.080 s wall /
-45.246 s CPU / 1,563,475,968 B peak cgroup memory, with cleanup verified and no
-OOM. It earns no efficiency credit. An earlier 20 ms immediate-child timeout
-probe did not establish descendant cleanup; it remains a separate prior attempt.
-The detached-helper scenario was executed on Linux, not Windows or macOS.
-
-A deterministic CI regression also asserts two retained
-observations at the same source range, excludes an unavailable location, and
-checks agreement with the full item view; the count deliberately measures
-observations rather than unique source sites.
-
-## Reproduce
-
-Use the pinned Node/npm toolchain and `npm ci`, then `npm run build:cached`.
-Download/decompress the versioned application outside the checkout and check its
-digest. Run with an operator-selected absolute artifact path:
-
-```bash
-node scripts/verify/javascript/module-references.mjs \
-  --artifact /absolute/path/obsidian-1.14.4.asar \
-  --source-path package.json --source-path main.js \
-  --path main.js --kind javascript-module --rounds 3 --cli-parity \
-  --tokenizer-python /absolute/path/to/tiktoken-venv/bin/python
-```
-
-The optional Python interpreter needs tiktoken 0.12.0; omit that flag to skip
-token accounting. It has a 60-second wall-time deadline, configurable with the
-positive integer `--tokenizer-timeout-ms`. The tokenizer uses the existing
-owned-command supervisor, with native identity checks and inherited run-token
-sweeping for descendants. Inputs and temporary Evidence use the existing private
-runtime root. Cleanup attempts preserve the primary error; incomplete command
-cleanup retains its owner and private files for recovery. `--mode legacy` or
-`--mode references` runs one arm. Fresh runs
-reanalyze the artifact and can produce different parent identities/resource
-coverage; the verifier requires equal facts within its paired run. The measured
-run additionally used the preserved [8 GiB cgroup observer](https://github.com/morluto/rea/blob/b3bdabab694af1f9801eff7caf75001b92314a58/experiments/analysis-efficiency/resource-run.py)
-and its adjacent `resource_payload.py`; observer hashes are in the JSON.
-No application, complete bundle, raw observations or ambient environment is
-archived. Temporary exported/inline Evidence files are removed after successful
-owned-command cleanup.
-
-For the Linux descendant-timeout check, create an operator-selected private
-directory and set `REA_TOKENIZER_PROBE_RECORD` to a file within it. Run the same
-real-artifact command with `--mode references --rounds 1`, replace the tokenizer
-with the absolute path to `scripts/fixtures/tokenizer-family-wrapper.py`, and add
-`--tokenizer-timeout-ms 2000`. Expect a timeout failure. The explicit marker
-confirms the detached helper started; the resource observer must separately
-verify the complete owned scope is empty, and the selected temporary root must
-contain no verifier files. The recorded PID is an observation, not authority to
-signal that process.

docs/verification/javascript-native-handoff-identity-2026-10-15.md

@@ -1,179 +0,0 @@
-# Native handoff byte-identity verification
-
-Tracks #3926 under #4027. Baseline: `9f8659e0536e4e50a438f5b9d5661f3c9624f6ac`.
-Final integration base: `62bf09809ef7bb224028916424f8f07652a20f4f`.
-
-The analyst already knows an ASAR-relative native path and supplies prior native
-Evidence. The question is which Evidence can be linked to that component's exact
-bytes. Discovery and native-provider execution are outside this task.
-
-## Observed behavior and correction
-
-The native-node producer distinguishes a content digest from a canonical path
-whose bytes are unavailable. Its unavailable observation legitimately cites the
-containing archive. The handoff consumer previously treated that supporting
-artifact digest as the native component's digest.
-
-Public CLI/stdio MCP regression: the missing-companion case failed and the
-available-byte control passed. Real Joplin reproduced the same result: missing
-keytar bytes produced an `evidence-linked` handoff with the ASAR digest and the
-simulated container observation. CLI/MCP agreed on that incorrect answer.
-
-The consumer now uses only the node owner's content-digest identity. The fallback
-observation scan is removed. Unavailable native nodes retain their canonical
-path, availability, container-backed provenance and partial coverage in the
-inline graph; they yield no false actionable handoff or native Evidence link.
-An empty handoff list describes eligibility, not absence of native components.
-The per-query node index is allocated only after an eligible target exists; no
-persistent cache, schema, tool or target authority is added.
-
-Final real checks passed both cases with exact CLI/MCP trace parity. The available
-control preserved the complete parent/trace Evidence IDs, native facts, links,
-coverage and all token projections. The missing control preserved its parent,
-native node, source provenance and coverage, while removing the wrong handoff
-and container Evidence link.
-
-## Real input and scope
-
-[Official Joplin v3.7.21 Linux AppImage](https://github.com/laurent22/joplin/releases/download/v3.7.21/Joplin-3.7.21.AppImage),
-published 2026-09-25, 201,462,481 bytes, SHA-256
-`5d202dcaca31e14206826aa3f04125e7c218dbc3dc3d98479d811efbd6b856c1`.
-
-Read-only 7z 26.02 inspection found 6,324 ASAR files, 46 unpacked entries and
-three `.node` components. Extract only the ASAR and those three binaries:
-
-```sh
-input_root="$(mktemp -d -t rea-native-handoff-XXXXXX)"
-curl --fail --location --output "$input_root/Joplin-3.7.21.AppImage" \
-  https://github.com/laurent22/joplin/releases/download/v3.7.21/Joplin-3.7.21.AppImage
-sha256sum "$input_root/Joplin-3.7.21.AppImage"
-7z x -mmt=1 "-o$input_root/extracted" "$input_root/Joplin-3.7.21.AppImage" \
-  resources/app.asar \
-  resources/app.asar.unpacked/node_modules/keytar/build/Release/keytar.node \
-  resources/app.asar.unpacked/node_modules/sqlite3/lib/binding/napi-v6-linux-glibc-x64/node_sqlite3.node \
-  resources/app.asar.unpacked/node_modules/onnxruntime-node/bin/napi-v6/linux/x64/onnxruntime_binding.node
-python3 - "$input_root" <<'PY'
-import os, sys
-from pathlib import Path
-root = Path(sys.argv[1])
-source = root / 'extracted/resources'
-for mode in ('available', 'missing'):
-    case = root / 'cases' / mode
-    case.mkdir(parents=True)
-    os.link(source / 'app.asar', case / 'app.asar')
-    if mode == 'available':
-        for native in (source / 'app.asar.unpacked').rglob('*.node'):
-            target = case / native.relative_to(source)
-            target.parent.mkdir(parents=True, exist_ok=True)
-            os.link(native, target)
-PY
-```
-
-Verify the asset digest above before extraction. The ASAR is 233,575,014 bytes,
-SHA-256 `767df409b18effe60421fbefcca873de237c7e813eac744ecdeebbc5e825a33a`.
-Keytar is 76,960 bytes, SHA-256
-`0700016bcd761cbe02d275f2046c7cc42f39f730a50d66e3d3307aa9d413373a`.
-All extracted component hashes are in the JSON record. 7z reported one
-trailing-data warning for the AppImage's embedded SquashFS and exited 0.
-
-Both cases select only `package.json` for static source analysis while retaining
-the inventory. The available case stages all three native companions; the other
-43 unpacked entries are not staged. The missing case stages none. Whole-application
-coverage is therefore partial in both cases, independently of the selected
-native component's known or unknown byte identity. Neither the application nor
-a native analysis provider is executed. Native Evidence is explicitly simulated
-to test exact subject linkage. Live Electron, real Ghidra/Hopper/IDA behavior and
-Windows/macOS verification are **NOT_ENOUGH_INFO**.
-
-## Reproduce the public workflow
-
-Use pinned Node 24.18.0/npm 11.16.0, `npm ci`, then `npm run build:cached`.
-The verifier returns compact records and deletes its private exported parent and
-CLI input after owned cleanup. No downloadable application or large Evidence is
-archived.
-
-```sh
-for mode in available missing; do
-  node scripts/verify/javascript/native-handoffs.mjs \
-    --artifact "$input_root/cases/$mode/app.asar" \
-    --addon-path node_modules/keytar/build/Release/keytar.node \
-    --native-sha256 0700016bcd761cbe02d275f2046c7cc42f39f730a50d66e3d3307aa9d413373a \
-    --source-path package.json --rounds 3 --cli-parity --require-safe
-done
-```
-
-Add `--tokenizer-python /absolute/path/to/python-with-tiktoken-0.12.0` for the
-reported BPE projections. The npm alias `verify:javascript:native-handoffs`
-builds first; recorded costs use the direct Node invocation above after building.
-For a pre-fix observation, run the saved verifier on the baseline build without
-`--require-safe`; `safe_identity: false` is an incorrect answer, not a passing
-analyst task. Paths affect serialized requests and some Evidence identities.
-
-The exact resource runs additionally used the preserved
-[8 GiB observer](https://github.com/morluto/rea/blob/b3bdabab694af1f9801eff7caf75001b92314a58/experiments/analysis-efficiency/resource-run.py)
-and adjacent `resource_payload.py`; both hashes are pinned in the JSON.
-
-## Completed workflow costs and limits
-
-| Case                   | Revision |  Wall s |      CPU s | Peak cgroup bytes | Identity oracle            |
-| ---------------------- | -------- | ------: | ---------: | ----------------: | -------------------------- |
-| Native bytes available | Before   |  60.369 |  59.806670 |     2,662,629,376 | pass                       |
-| Native bytes available | After    | 258.885 | 106.221003 |     2,678,456,320 | pass, exact baseline facts |
-| Native bytes missing   | Before   |  57.930 |  57.479109 |     2,719,457,280 | wrong identity/linkage     |
-| Native bytes missing   | After    |  59.738 |  59.254776 |     2,571,235,328 | pass, unknown retained     |
-
-Whole-verifier resources include input hashing, analysis, three retained trace
-queries, export, CLI parity and tokenization. One CPU, 8 GiB hard cap, 6 GiB early
-stop, no swap; cleanup verified and no OOM. Memory includes charged file cache,
-not summed RSS. Counters are at payload exit while the observer remains alive.
-The available control's final wall and CPU times are substantially higher than
-baseline. Earlier post-fix controls on the original base took 61.657/74.956 s wall
-and 61.135962/60.352428 s CPU for available/missing cases; their complete receipts
-remain separately recorded. The final missing case took 59.738 s wall. This
-variability is unresolved and cannot be attributed to the native consumer change.
-These runs establish neither speedup nor performance equivalence. Input hashing warms the ASAR
-cache, build/OS caches and shared-host scheduling are uncontrolled. Fresh MCP
-sessions do not establish OS-cold conditions. First post-analysis and repeated
-warm-query samples are preserved separately; query CPU/memory are unmeasured.
-
-One defined task is one analysis summary plus one retained trace, with the path
-and prior Evidence already supplied. Static `cl100k_base`/tiktoken 0.12.0 counts
-include both requests, replies and name/description/inputSchema contracts:
-
-| Available-byte task, unchanged before/after     | BPE tokens |
-| ----------------------------------------------- | ---------: |
-| Selected catalog + structured replies           |     12,340 |
-| Selected catalog + complete tool replies        |     18,906 |
-| Full catalog projection + structured replies    |    202,292 |
-| Full catalog projection + complete tool replies |    208,858 |
-
-These are alternative reply/catalog projections. The selected catalog alone is
-5,570 BPE; the full projection is 195,522. Output schemas, annotations, host
-rendering/replay, reasoning, final answers and model billing are unmeasured.
-Repeated queries/export/CLI/tokenization are validation overhead outside this
-one-task token count, but inside resource receipts. Missing-case structured-task
-counts change 11,372 → 11,103 by removing unsupported claims; the incorrect
-baseline earns no efficiency credit.
-
-## Regression and verification record
-
-The initial four-file focused selection passed 24 tests. The two public cases
-were rerun after adding named summary-result parsing and correcting an optional
-architecture factory input. Omitting that field instead of passing null produced
-byte-identical normalized simulated Evidence in all four real-case inputs.
-The initial CLI-selector harness error and first typecheck failure are retained
-as harness/validation attempts, not product reproductions.
-
-After syncing the reviewed upstream changes, the updated application workflow
-CLI acceptance file passed 34 tests, bringing the focused selection to 58 distinct
-cases across five files. Both Joplin controls were then repeated on the final
-integration base. Canonical byte identity is also used by the related version
-matching/content comparison consumers; no equivalent observation-digest fallback
-was found there.
-
-Final `npm run check && npm run docs:check` passed on the integration base,
-including five documentation consistency tests: 128.732 s wall, 115.518920 s CPU,
-4,301,684,736 B peak cgroup memory, clean owned exit and no OOM.
-
-Final public and static/docs outcomes are recorded in the
-[compact measurements and source pins](javascript-native-handoff-identity-2026-10-15.json).

docs/verification/javascript-retained-facts-2026-10-15.md

@@ -1,450 +0,0 @@
-# Selected retained JavaScript observations
-
-Tracks #4190 under #4027. Base:
-`85eac7b92bac39bf2da6c00ebf6ba1b11b4c8d1f`. Initial working version:
-`f70b8c0bc512094938e817c083921e69aaacfcbe`; the final version additionally
-supports opt-in property-name discovery. Exact source hashes, all measured
-attempts and compact agent answers/operations are in the adjacent JSON record.
-
-The analyst knows several application-relative metadata/native paths and needs
-selected facts with their original identities and provenance. The previous
-module-reference view excludes those kinds. A full feature trace answers a
-broader relationship question; a real Joplin package trace exceeded the 10 MiB
-reply limit twice in #4190. Exporting retained Evidence and projecting it locally
-is a valid alternative, and is used as the completed baseline here.
-
-## Contract and ownership
-
-`inspect_analysis_view` / `rea inspect-analysis-view` accept
-`view.kind: "javascript-facts"`. `where.paths` matches only original Evidence
-artifact-path or source-range source strings; no filesystem lookup, normalization
-or property/display-path fallback. Omission includes unknown locations; `[]`
-matches none. Optional `where.kinds` selects original node kinds.
-
-Required `property_keys` selects original observation properties; `[]` returns
-identity and provenance only. Missing keys remain omitted, distinct from null.
-`include_available_property_keys: true` lists sorted original property names for
-returned rows without unselected values. It defaults to false. There is no
-cross-observation merging or semantic inference. Each row preserves its node ID,
-identity, observation ID, source-map reference and complete original Evidence.
-
-A single scan retains only the requested page. Caller-selected offset/limit are
-preserved; existing transport admission still applies. Coverage counts matching
-observations, while shared application/semantic source coverage, unknown counts
-and caller source selection describe the retained parent. Exhausting a page is
-not a claim of globally complete analysis. Full Evidence remains exportable.
-The domain projector and shared application service own both CLI/MCP behavior;
-no new provider, executor, persistent cache or live-state freshness claim exists.
-
-## Real input and reproduction
-
-Use the official [Joplin v3.7.21 Linux AppImage](https://github.com/laurent22/joplin/releases/download/v3.7.21/Joplin-3.7.21.AppImage).
-Acquisition and exact selective 7z extraction are documented in
-[native handoff verification](javascript-native-handoff-identity-2026-10-15.md#real-input-and-scope).
-Asset SHA-256:
-`5d202dcaca31e14206826aa3f04125e7c218dbc3dc3d98479d811efbd6b856c1`.
-ASAR: 233,575,014 bytes, SHA-256
-`767df409b18effe60421fbefcca873de237c7e813eac744ecdeebbc5e825a33a`.
-Stage all three native companions as in that procedure; the other 43 unpacked
-entries remain unstaged. No downloadable app or large Evidence is archived.
-
-The five selected sources are `ElectronAppWrapper.js`, its `.map`, `index.html`,
-`package.json` and `node_modules/keytar/build/Release/keytar.node`. Inventory
-covers 6,324 files; whole-application analysis remains partial. Normal processing
-retains package `@joplin/app-desktop` / `3.7.21`; keytar's observed physical bytes
-hash to `0700016bcd761cbe02d275f2046c7cc42f39f730a50d66e3d3307aa9d413373a`.
-That digest does not establish runtime execution. Deliberate `analysis_timeout_ms:1`
-retains native identity and unavailable `not-started` phases for
-`parse-local-source-map`, `parse-html-script-references`, and `parse-package-json`.
-Missing source-map original content is distinct from failure to parse the map.
-
-After pinned Node/npm installation, `npm ci` and `npm run build:cached`:
-
-```sh
-query='{"kind":"javascript-facts","where":{"paths":["ElectronAppWrapper.js.map","index.html","package.json","node_modules/keytar/build/Release/keytar.node"]},"property_keys":["path","bytes","file_kind","text_status","parse_status","json_parse_status","availability","operation","analysis_status","limitation","name","version","main","renderer"],"offset":0,"limit":64}'
-for mode in export view; do
-  node scripts/verify/javascript/retained-facts.mjs \
-    --artifact "$input_root/cases/available/app.asar" --mode "$mode" \
-    --query "$query" --rounds 3 \
-    --source-path ElectronAppWrapper.js \
-    --source-path ElectronAppWrapper.js.map --source-path index.html \
-    --source-path package.json \
-    --source-path node_modules/keytar/build/Release/keytar.node
-done
-```
-
-Add `--analysis-timeout-ms 1` to both modes for the interruption control,
-`--cli-parity` to view mode for exact complete Evidence comparison, and
-`--tokenizer-python /absolute/python-with-tiktoken-0.12.0` for BPE projections.
-For field discovery, use `property_keys: []` and
-`include_available_property_keys: true` in both modes. The export baseline runs
-the recorded independent selector as an owned shell/Node caller program; it does
-not import the production projector. Later export samples reuse the same
-immutable export. View samples precede diagnostic export and CLI verification.
-
-All costly commands run serially with the preserved
-[resource observer](https://github.com/morluto/rea/blob/b3bdabab694af1f9801eff7caf75001b92314a58/experiments/analysis-efficiency/resource-run.py)
-using `--memory-gib 8 --observe-payload-exit`: one CPU, 8 GiB hard limit,
-6 GiB early stop, no swap, 192 tasks; Node heap 2 GiB, `UV_THREADPOOL_SIZE=1`,
-`GOMAXPROCS=1`, `GOMEMLIMIT=3GiB`. Observer hashes and cleanup receipts are in JSON.
-Memory is peak process-family cgroup memory including file cache. At-answer
-counters include observer/startup, before repeat/parity/tokenization work; final
-external receipts include that verification work and are explicitly measured at
-payload exit while the observer remains alive, not final whole-scope counters.
-
-## Costs and interpretation
-
-The original completed normal baseline retrieved the selected facts in 2.981 s
-(first export plus projection), versus 0.157 s for the initial view; warm reads
-were 1.475/1.146 s versus 0.056/0.046 s. Both returned the same 12 observations,
-properties, original Evidence and parent coverage. The 1 ms interruption control
-returned the same 11 observations. CLI/MCP complete view Evidence matched exactly.
-The earlier slow baseline interruption run is preserved, rather than discarded.
-
-This is **not an established token improvement**. Counting selected input
-contracts, preparation, requests and structured replies, normal baseline BPE was
-8,887 versus 17,289 for the initial view. The existing general view contract and
-Evidence wrapper cost more than the caller code saved. Counting the full
-name/description/input-schema catalog instead gives 188,206 versus 189,954.
-These are `cl100k_base` counts, not billing or model context measurements; output
-schemas, exec schema and host rendering are unmeasured. Final same-backend
-controls and optional-discovery measurements are recorded separately in JSON.
-
-Actual Codex CLI trials use the runnable
-[agent harness](../../experiments/analysis-efficiency/javascript-facts-agent.mjs),
-installed CLI 0.161.0, requested alias `gpt-5.6-terra` / high, unchanged questions
-per pair, and fresh processes/MCP. Restricted baseline tools are analysis and
-export; candidate adds the existing `inspect_analysis_view`. Both can reach the
-same backend information through export. Shell projection is allowed only on
-retained exports; target execution, raw ASAR shell inspection, downloads,
-repository investigation and other agents are forbidden in both.
-
-```sh
-node experiments/analysis-efficiency/javascript-facts-agent.mjs \
-  --repository /absolute/rea --artifact "$input_root/cases/available/app.asar" \
-  --arm view --task direct --output /absolute/new-result-directory
-```
-
-Run each `direct`, `partial`, `negative` task with both `export` and `view` arms,
-serially under the same resource observer. The negative task tests the claim
-that a static byte digest establishes native execution. Existing normal auth is
-used with `--ignore-user-config`; no credential copying or HOME/CODEX_HOME
-mutation. The installed CLI requires `code_mode_host: true` for all dispatch;
-that frontend setting is identical in both arms and is not a new REA executor.
-Experimental `code_mode` / `code_mode_only` remain disabled. MCP tool allowlists
-and per-tool settings use the [official Codex configuration](https://developers.openai.com/codex/mcp).
-Historical harness patches preserve the invalid disabled-host attempt and the
-initial working harness; the former is excluded as a harness failure.
-
-Initial direct baseline: 332.9 s, 741,744 cumulative input tokens, 17 operations;
-initial candidate: 182.2 s, 405,267 input tokens, 10 operations. The candidate
-still exported, guessed several property names, and gave a qualified phase
-answer that mixed missing original content with processing gaps. The follow-up
-with opt-in field-name discovery used it correctly but still exported: 343.1 s,
-835,185 input tokens and 17 operations. Its normal phase answer was correct.
-All attempts remain recorded; selecting only the better initial candidate would
-misrepresent the result. Cumulative input includes repeated cached context and
-is not peak context. Requested model alias does not prove the underlying model;
-USD, peak context, model scheduling and cache effects are unmeasured.
-
-The capability is useful as a precise, bounded retained-data interface for
-clients that know their question. These small agent trials do not justify a
-universal recommendation, a token-saving claim, or production code mode.
-Property discovery is opt-in because even field-name metadata costs context.
-No cross-platform/live-browser/native-provider compatibility is established by
-these static Linux Joplin checks.
-
-## Validation and retained failures
-
-The final focused source set has 85 passing cases across four files, including
-public MCP real-filesystem selection/paging/null/identity semantics, portable vs
-retained complete Evidence parity, advertised SDK schema validation, malformed
-selectors, literal artifact/source-range/URL distinctions, unknown locations,
-empty filters and opt-in names without large unselected values. Distinct SDK
-schema/presentation checks, full static/docs gates and real final controls are
-listed with their final executed results in JSON.
-
-Initial test fixtures incorrectly encoded invalid artifact/unknown locations and
-omitted a required partial-graph limitation; these were fixture failures, not
-product reproductions, and were corrected without relaxing the domain contract.
-The initial static gate found two unreferenced verifier files; a real npm
-verification entrypoint fixed discoverability without ignores. Later full V1
-static/docs and 16 SDK schema/presentation tests passed. The final-version gates
-are recorded separately; prior checks are not substituted for them.
-
-## All actual agent attempts
-
-One valid trial per surface/task/version; no aggregate success rate or causal speedup.
-Resource columns cover the whole payload, including cleanup.
-
-| Task / interface / version |  Wall s |      CPU s | Peak cgroup B | Cumulative input / cached | Operations |
-| -------------------------- | ------: | ---------: | ------------: | ------------------------: | ---------: |
-| direct-export-host (v1)    | 332.921 | 141.004989 | 1,750,212,608 |         741,744 / 675,072 |         17 |
-| direct-view-host (v1)      | 182.183 |  58.726775 | 1,976,950,784 |         405,267 / 353,024 |         10 |
-| direct-view-discovery (v2) | 343.080 | 151.271793 | 1,808,695,296 |         835,185 / 766,464 |         17 |
-| partial-export (v2)        | 170.297 |  67.062935 | 1,807,712,256 |         412,200 / 346,624 |         12 |
-| partial-view (v2)          | 192.489 | 100.813091 | 1,175,404,544 |         256,075 / 214,528 |          4 |
-| negative-view (v2)         |  93.970 |  42.553715 | 1,869,479,936 |         188,514 / 148,736 |          5 |
-| negative-export (v2)       | 132.727 |  53.359974 | 1,801,166,848 |         269,529 / 229,632 |          8 |
-
-The partial candidate returned exact retained phase entries using four MCP calls,
-without export or shell. It used less input context but more CPU and wall time
-than the corresponding export baseline. Both negative-task arms preserved runtime
-execution as unknown; the candidate still exported once. The one invalid
-disabled-host attempt (37.679 s / 5.070758 CPU s / 880,414,720 B) is preserved
-as a harness failure, with unavailable operation counts.
-
-Use the [specific artifact oracle](../../experiments/analysis-efficiency/javascript-facts-grade.py) on the compact JSON:
-
-```sh
-python3 experiments/analysis-efficiency/javascript-facts-grade.py \
-  docs/verification/javascript-retained-facts-2026-10-15.json
-```
-
-It checks actual receipt IDs, caller selection/deadline, exact native facts and
-processing entries. Its coverage check recognizes a partial declaration rather
-than validating arbitrary prose. Read the preserved original answers and
-qualifications: some trials cite a correct physical-byte observation plus an
-ASAR-entry observation outside the named native node. The initial candidate
-also mixed true missing original content with unavailable processing phases.
-The API itself preserves node/observation pairs; these are qualified agent
-composition outcomes, not a claim of product provenance corruption.
-
-Pre-integration V2 source validation passed: full `npm run check`, generated metadata/docs
-checks, five documentation consistency cases, test discovery, and 18 MCP cases
-(two expanded facts cases plus 16 SDK schema/presentation cases). Together with
-the unchanged 83 domain/application/MCP cases passed on V2, this establishes
-101 distinct focused cases across six files. The final combined gate took
-182.620 s wall / 182.170929 s CPU / 4,288,471,040 B peak cgroup memory, with no
-OOM and verified cleanup. Exact command and receipts are in JSON. That pre-integration
-runtime tree matches the V2 agent-trial runtime tree exactly; formatting and
-added validation did not change that built backend.
-
-## All pre-integration scripted workflows
-
-Each row uses a fresh MCP process; warm samples reuse its retained parent or export.
-The first-answer wall clock includes input hashing/catalog/preparation; CPU and memory
-are scope counters at that answer, before repeat/diagnostic/CLI/tokenization work.
-
-| Run                      | First retrieval ms |   Warm retrieval ms | First-answer wall s | CPU s at answer | Peak B at answer | Selected / full-catalog structured BPE |
-| ------------------------ | -----------------: | ------------------: | ------------------: | --------------: | ---------------: | -------------------------------------: |
-| baseline-export-control  |           2980.631 | 1474.954 / 1146.062 |              46.429 |       46.473136 |    2,021,326,848 |                        8,887 / 188,206 |
-| baseline-export-timeout  |           6882.206 | 4004.294 / 3943.480 |              99.212 |       77.790901 |    1,962,766,336 |                        6,300 / 185,619 |
-| initial-view-control     |            157.188 |     56.020 / 45.719 |              40.802 |       41.025768 |    1,516,302,336 |                       17,289 / 189,954 |
-| initial-view-timeout     |            145.577 |     55.958 / 38.476 |              39.705 |       39.915172 |    1,533,857,792 |                       14,601 / 187,266 |
-| final-export-control     |           2930.118 | 1208.993 / 1255.474 |              45.338 |       45.409611 |    1,754,632,192 |                        8,928 / 188,805 |
-| final-view-control       |            160.185 |     49.180 / 44.121 |              41.925 |       42.154669 |    1,327,824,896 |                       17,393 / 190,058 |
-| final-export-timeout     |           2664.126 | 1158.068 / 1170.790 |              42.200 |       42.291057 |    2,010,955,776 |                        6,341 / 186,218 |
-| final-view-timeout       |            154.183 |     65.214 / 44.951 |              39.734 |       39.963850 |    1,438,531,584 |                       14,707 / 187,372 |
-| discovery-export-control |           2704.045 | 1290.199 / 1157.228 |              45.407 |       45.484008 |    2,030,903,296 |                        9,049 / 188,926 |
-| discovery-view-control   |            167.756 |     55.904 / 52.628 |              42.266 |       42.491752 |    1,309,347,840 |                       17,467 / 190,132 |
-
-All ten workflows passed their independent export oracle. Known-field normal pairs
-return the same 12 observations; interrupted pairs return the same 11. Opt-in
-field-discovery pairs return the same original property names for 12 observations
-without selected values. All four measured view workflows passed exact complete
-CLI/MCP Evidence parity (initial normal/timeout and final normal/timeout), and
-the final discovery view passed it too. Canonical selected-answer digests agree
-across corresponding export/view pairs; raw serialization digests may differ by
-JSON property order. Final runtime/source and payload cleanup receipts are in JSON.
-
-Final normal selected-contract cost is 8,928 BPE for export/projection versus
-17,393 for the view. The full catalog projection is identical between final
-arms; view Evidence wrapping still adds cost. Faster retrieval is useful, but
-fewer bytes/calls alone cannot establish lower whole-agent tokens or latency.
-
-After the final documentation clarification and measurement tables, generated
-docs/checks passed again (including five consistency cases). Duplicate scanning
-and TODO checks passed; final runner/grader syntax and all three historical
-harness reconstructions were verified against their recorded SHA-256 values.
-No tech-debt markers were introduced. These final audit receipts are retained
-separately from backend task performance.
-
-## Main integration on 2026-10-15
-
-The measured V2 checkpoint is
-`d32547f9ac7769049a8ee6fbc8a27abcb2285a54`. Main advanced during the trials;
-merge `5f0b1fa47ffdf25b3775d87c2e07aea6cff26f31` integrates pinned current main
-`2202e3f0ba556d40cc6e598df1ecbdf1eda56c13`, including independent semantic
-value/lifecycle fixes. Historical cohorts remain valid for their pinned backend,
-not measurements of the later integrated backend. Integrated normal/interruption
-export/view controls and the complete focused/static/docs gates are recorded
-separately below and in JSON when executed. No agent pilot rerun or universal
-token/latency benefit is inferred from that source update.
-
-Integrated checks passed: all **101 focused cases in six files**, full static
-checks, generated docs/metadata, five consistency cases and test discovery.
-The combined gate took **247.955 s wall / 247.425940 s CPU / 4,303,970,304 B**
-peak cgroup memory; no OOM and verified cleanup.
-
-| Integrated run            | First retrieval ms |             Warm ms | First-answer wall s | CPU s at answer | Peak B at answer | Structured selected / full-catalog BPE |
-| ------------------------- | -----------------: | ------------------: | ------------------: | --------------: | ---------------: | -------------------------------------: |
-| integrated-export-control |           3231.861 | 1224.159 / 1155.725 |              45.631 |       45.728169 |    1,959,448,576 |                        8,936 / 188,813 |
-| integrated-view-control   |            148.705 |     45.964 / 37.995 |              41.674 |       41.896616 |    1,527,902,208 |                       17,393 / 190,058 |
-| integrated-export-timeout |           2503.346 | 1159.864 / 1232.282 |              41.260 |       41.350087 |    1,963,479,040 |                        6,341 / 186,218 |
-| integrated-view-timeout   |            138.893 |     53.395 / 35.014 |              37.307 |       37.530088 |    1,483,386,880 |                       14,707 / 187,372 |
-
-All four integrated controls passed their independent export oracle; both view
-cases passed exact complete CLI/MCP Evidence parity. Normal/timeout selected
-facts and source coverage also match the V2 checkpoints. Temporary export paths
-can change a few request BPE tokens; exact requests are measured, not normalized.
-The new runtime contains 1,633 JS files, tree SHA-256
-`6a5763452c1522a782e531e6dda227ea10140f9f9d52148fc1602a6ecf3cea5a`
-under the explicit compact sorted path/hash algorithm in JSON. Agent-trial
-runtime pins remain separate. These controls do not justify a causal speedup
-or whole-agent token claim.
-
-## Review: experiment metadata and failure ownership
-
-Greptile review on `7238fd080` found two valid runner defects: a hardcoded CLI
-version, and a `finally` error which hid command/diagnostic failures. The runner
-now probes `codex --version` through the existing owned-command boundary before
-starting an agent, and records the observed output in successful/failed trials.
-Probe failure or empty output stops the trial. The local real-command smoke
-returned `codex-cli 0.161.0`; historical trials retain their original metadata.
-
-Cleanup retains the original `OwnedCommandFailure` or diagnostic-write aggregate,
-its cleanupResult/resources, the unresolved cleanup owner and private workspace.
-Shared `closeVerifierResources` combines a separate root-cleanup failure with
-the primary error. Snapshot diagnostics use actual retained/observed byte counts,
-not nonexistent stream `truncated` fields. Signal handlers remain installed
-through final cleanup; late cancellation preserves completed trial data and
-returns typed cancellation. Success is printed after finalization.
-
-Eight deterministic cases exercise the real experiment entrypoint, production
-private-root creation/removal and `OwnedCommandFailure`, with controlled command
-and cleanup outcomes: observed version, failed/empty version, retained owner,
-recording failure, root cleanup failure, ordinary timeout, nonzero exit and late
-cleanup-time cancellation. No model, application or orphan process is launched
-by these cases. The baseline exposed the original errors; an intermediate failed
-assertion assumed Node omitted `[Error]` when printing the class and was corrected
-to check the original class/message independently. All attempts remain in JSON.
-
-The final eight cases passed, followed by the complete Python suite (35 bridge
-plus71 experiment cases:106 total, including the eight new cases). Full static,
-docs/five consistency and test-discovery checks passed again; all four historical
-harness patches reconstruct their recorded hashes. At that review-fix checkpoint, the backend remained the integrated 1,633-file
-tree above; no model trial or real-app analysis was rerun for those runner-only
-corrections. The following lifecycle integration is a separate backend version.
-The fourteen historical real-app answers retain their original versions.
-
-```sh
-python3 -m unittest discover -s experiments/analysis-efficiency \
-  -p test_javascript_facts_agent.py -v
-npm run test:python
-```
-
-## Lifecycle-main integration on 2026-10-16
-
-Upstream #4274 merged as `1b97b0f3707b1cf78ac98bd4ae81638b33cc286f`.
-Merge `2ca63f4d9f2e489ce3b5cbccdc204ad0be39551c` integrates it without
-changing the retained-facts implementation. Locked dependencies were reinstalled.
-The current runtime contains **1,645 JS files**, compact sorted path/hash tree
-`311fd78c7ca4717e56253413bc2725097929e0d6656efca69c9b3646a65ca348`.
-The JSON preserves both earlier runtime/source manifests and all historical
-trials. No model trials were rerun.
-
-Full static, generated docs/metadata, five documentation-consistency cases,
-test discovery and all **106 Python cases** passed. The initial combined command
-returned exit 1: **113 focused cases passed and one contract-order fixture hit its
-20-second subprocess budget**. It took 483.978 s wall / 386.555153 s CPU /
-5,169,971,200 B peak cgroup memory, with no OOM and verified cleanup. An isolated
-CPU-15 retry also failed at that deadline. These attempts remain failures in JSON.
-The original unmodified test then passed on one CPU 10 in 11.446 s, retaining its
-20-second deadline; its complete wrapper took 13.545 s wall / 13.272853 s CPU /
-920,023,040 B peak. Thus **114 distinct focused cases across seven files passed
-across the documented invocations**, including the previously failing ADB case.
-This does not describe the initial combined command as successful.
-
-Four fresh controls use the same one-CPU/8-GiB wrapper, explicitly selecting CPU
-10 because CPU 15 was observed fully busy while this task was idle. Memory
-includes file cache. First-answer counters precede diagnostic exports, repeated
-queries, CLI parity and tokenization; external scope receipts include that extra
-verification. Caches and host scheduling remain uncontrolled.
-
-| Lifecycle run            | First retrieval ms |             Warm ms | First-answer wall s | CPU s at answer | Peak B at answer | Structured selected / full-catalog BPE |
-| ------------------------ | -----------------: | ------------------: | ------------------: | --------------: | ---------------: | -------------------------------------: |
-| lifecycle-export-control |           4241.377 | 2195.294 / 1405.121 |              49.404 |       48.700591 |    2,240,831,488 |                        8,947 / 188,824 |
-| lifecycle-view-control   |            152.862 |     47.474 / 40.375 |              44.715 |       44.709653 |    1,540,792,320 |                       17,421 / 190,086 |
-| lifecycle-export-timeout |           2543.698 | 1243.063 / 1074.366 |              45.964 |       45.802632 |    1,986,072,576 |                        6,341 / 186,218 |
-| lifecycle-view-timeout   |            151.242 |     89.234 / 35.575 |              43.033 |       42.952115 |    1,498,869,760 |                       14,707 / 187,372 |
-
-All four passed the independent current-runtime export oracle. Both view cases
-passed exact complete CLI/MCP Evidence parity. Normal results retain the same
-12 original observations and their complete per-row Evidence. Their parent
-Evidence changes with `semantic_unknown_count` 41,161 → 41,162; the additional
-unknown was not individually isolated. Both current workflows report the same
-current coverage, rather than projecting the historical count. Interrupted
-results retain the same complete 11-row answer, parent and coverage as before.
-There are now 18 version-labelled manual workflows and nine complete view
-CLI/MCP parity controls. Historical agent measurements do not become claims
-about this newer backend.
-
-The normal selected structured task still costs more BPE for the view
-(17,421 versus 8,947), while its first retrieval is smaller in this cohort
-(152.862 versus 4,241.377 ms). No causal speedup, portable equivalence or universal
-token benefit follows from these single-cohort measurements.
-
-Final `check:fast`, `docs:check` and five consistency cases passed again:
-43.728 s wall / 41.873577 s CPU / 814,235,648 B peak. All 16 authored source
-hashes and the measured runtime tree still match.
-
-### Default-client compilation diagnostic
-
-The pinned SDK client 2.3.1 builds its output-validator index by compiling every
-cached `tools/list` output schema on the first `callTool`. A CPU profile and
-read-only instrumentation located the fixture delay there; PNG comparison and
-cleanup were not the expensive stages. The completed default-client fixture
-passed the original catalog and response assertions: 207 tool schemas and 16
-named responses. This replay does not turn either timed-out Vitest run into a
-pass. No SDK, production code, fixture, or test deadline was changed.
-
-A separately built main-only worktree at `1b97b0f37` also compiles the complete
-catalog. Its fixture took 11.598 s wall / 11.262708 s CPU; the candidate diagnostic
-took 24.899 s wall / 12.364085 s CPU. CPU-15 saturation, different transient
-scheduling and warm caches prevent a causal wall-time comparison. The
-`inspect_analysis_view` output schema grows from 128229 to 137174 compact UTF-8
-bytes; that additional client work remains a cost of the additive contract.
-The sampled profile attributes substantial wall samples to SDK AJV compilation
-and GC; these samples are not CPU-time attribution. Raw catalogs and CPU profiles
-are reproducible diagnostics and are not archived. Their hashes and compact
-results remain in JSON.
-
-Reproduce the profile against either pinned checkout after its locked install
-and runtime build, within the resource wrapper above:
-
-```sh
-node --cpu-prof --cpu-prof-dir=/tmp/rea-contract-profile \
-  tests/fixtures/contractPresentation.mjs reversed > /tmp/rea-contract-result.json
-```
-
-To identify individual compilations on the pinned SDK, preload this diagnostic
-from an ignored checkout-local `.cache/contract-compile-probe.mjs`:
-
-```javascript
-import { Client } from "@modelcontextprotocol/client";
-const compile = Client.prototype._compileOutputValidator;
-Client.prototype._compileOutputValidator = function (tool) {
-  const started = performance.now();
-  try {
-    return compile.call(this, tool);
-  } finally {
-    console.error(
-      JSON.stringify({
-        name: tool.name,
-        compile_ms: performance.now() - started,
-      }),
-    );
-  }
-};
-```
-
-```sh
-node --import ./.cache/contract-compile-probe.mjs \
-  tests/fixtures/contractPresentation.mjs reversed > /tmp/rea-contract-result.json
-```
-
-This private SDK hook is diagnostic-only and version-specific. It is not a REA
-execution surface or a proposed SDK fork. A client can separately evaluate the
-public per-call `toolDefinition` option without reducing catalog completeness
-or changing backend authority; no such client change was made here.

docs/verification/javascript-window-options-2026-10-16.md

@@ -1,72 +0,0 @@
-# Local constant BrowserWindow options — Joplin verification
-
-This record covers #4366, part of #3536 and #4027. The unchanged official Joplin desktop 3.7.21 ASAR contains `const windowOptions = {...}` at `ElectronAppWrapper.js:238–263`, an unrelated conditional `icon` assignment, and `new BrowserWindow(windowOptions)` at line 268. The scoped public workflow analyzes that source plus `package.json`, then reads the window through `inspect_analysis_view`. It does not execute Joplin.
-
-The baseline returns one dynamic window with zero explicit preferences. The candidate retains four literal booleans (`nodeIntegration: true`, `contextIsolation: false`, `spellcheck: true`, `enableRemoteModule: true`) and the explicit dynamic `session` expression. The original window identity and constructor location are preserved. Constant association is inferred, with the original object's source range; omitted preferences do not acquire Electron defaults. Popup overrides and literal spreads remain separate work under #3536.
-
-The [compact measurements](javascript-window-options-2026-10-16.json) retain both trial orders, exact inputs, runtime/harness/source fingerprints, original result rows, CLI/MCP Evidence parity and observer receipts. ASAR SHA256 is `767df409b18effe60421fbefcca873de237c7e813eac744ecdeebbc5e825a33a`; the 39,972-byte source is `dcd2260e46dd1b4922449090e268773b052d58ba24ff977b08b978bee6cc9da1`. Download/recreation provenance is in the [earlier Joplin record](javascript-retained-facts-2026-10-15.md). Downloadable applications and complete exports are not committed.
-
-## Correctness
-
-Both trial pairs match the independent export-and-filter oracle and exact complete CLI/MCP view Evidence. The pinned [Joplin checker](../../experiments/analysis-efficiency/joplin-window-options-check.py) verifies exact settings, explicit unknowns, source ranges and stable window identity. Manual negative controls reject a wrong boolean, numeric0 substituted for false, a changed identity and observed instead of inferred provenance.
-
-A raw semantic graph digest changes because the semantic graph commits its parent `application_graph_id`. The final record separately checks complete semantic content after excluding exactly that foreign key and its dependent top-level `graph_id`; original raw digests remain recorded and linked to the independent complete CLI observations. These exclusions follow the canonical semantic graph schema and builder, rather than filtering differing nodes or relations.
-
-## Costs and limitations
-
-| Trial order             | Variant   | First answer (s) | CPU (s) | Peak cgroup bytes at answer | Projected task BPE |
-| ----------------------- | --------- | ---------------: | ------: | --------------------------: | -----------------: |
-| Baseline then candidate | Baseline  |           70.283 |  69.258 |                  1578196992 |              13337 |
-| Baseline then candidate | Candidate |           42.701 |  42.437 |                  1523793920 |              13432 |
-| Candidate then baseline | Candidate |           44.793 |  44.766 |                  1527357440 |              13432 |
-| Candidate then baseline | Baseline  |           42.958 |  42.946 |                  1533308928 |              13337 |
-
-The baseline tool workflow cannot supply these settings; additional manual source-reading costs are unmeasured. This is a correctness gain with +95 projected structured-task tokens (+203 when counting complete tool replies). Both use the same 8,069-token selected catalog. The first apparent latency gain does not repeat: the reversed pair makes the candidate about 1.8 s slower. These samples establish no speedup or general performance result. First view retrievals are 106–121 ms; subsequent within-session reads are 22–35 ms. No persistent analysis cache was added.
-
-All costly jobs run serially with one CPU 10, an 8 GiB hard limit, 6 GiB early stop, no swap and 192 tasks, pinned Node 24.18.0/npm 11.16.0. Cgroup memory includes file cache and is not RSS. At-answer counters precede repeated reads, diagnostic export, full-graph hashing, CLI parity and tokenization. Whole-verifier observer receipts measure that extra work separately. The observer reported no OOM and verified payload cleanup in each scoped run.
-
-Each task starts a fresh MCP process; the input hash warms file cache, and build/OS caches are uncontrolled. Three retrieval samples are not three cold analyses. `cl100k_base`/tiktoken 0.12.0 projections include preparation, first answer and selected input schemas; output schemas, actual billing, reasoning, peak agent context, host rendering and system-cold behavior were not measured. No live-model or Electron runtime claim is made.
-
-## Validation and reproducibility
-
-The integrated focused invocation passed 156/157 cases across 9 files. An unchanged upstream generator CLI/MCP case exceeded its original 30 s deadline in grouped execution; isolated runs at that same deadline passed on both main and candidate (18.590/18.034 s). The grouped failure is preserved; its root cause is not established and its deadline was not changed. Own CLI/MCP/fact-view, source mutation/escape/identity and capacity regressions passed. Static/document checks are recorded in the JSON validation receipts.
-
-An initial real-app verifier attempt failed because its coverage assertion handled only artifact paths. The independent selector and tool already supported source-range paths. The verifier assertion was corrected before both valid pairs; that failed attempt is excluded from performance samples. The source oracle's initially transcribed closing line 264 was corrected to 263 after rereading the unchanged source. Neither correction changes production analysis.
-
-After building the pinned baseline and candidate in separate checkouts, run this same command serially in baseline→candidate and candidate→baseline order, using the matching harness hash recorded for each pair:
-
-```sh
-query='{"kind":"javascript-facts","where":{"paths":["ElectronAppWrapper.js"],"kinds":["browser-window"]},"property_keys":["options_status","web_preferences_status","web_preferences","preload_path","resolution_sources"],"offset":0,"limit":64}'
-node scripts/verify/javascript/retained-facts.mjs \
-  --artifact /absolute/path/to/app.asar --mode view --query "$query" \
-  --source-path ElectronAppWrapper.js --source-path package.json \
-  --rounds 3 --cli-parity --tokenizer-python /absolute/python-with-tiktoken-0.12.0
-python3 experiments/analysis-efficiency/joplin-window-options-check.py \
-  docs/verification/javascript-window-options-2026-10-16.json
-```
-
-Apply the linked resource observer from the earlier Joplin record to each costly command. Complete CLI observations use the same source selection through `analyze-javascript-application --format json`. The preserved [content comparator](../../experiments/analysis-efficiency/compare-javascript-semantic-content.mjs) takes the baseline CLI JSON, candidate CLI JSON and this measurement record, then emits the semantic proof while retaining both original graph identifiers and raw digests. It reads sequentially and reports a concise failure rather than printing full graphs. The baseline backend is unchanged main `2c7583599b9ac1c847bd77b1940930fd8d4594c7`; only the matching verification harness is applied there. Source and runtime pins distinguish measurement versions from later documentation changes.
-
-## Ordering review follow-up
-
-Codex review identified an introduced producer-ordering regression: inline windows were appended during traversal while deferred constants were appended afterward. The new mixed constant/inline/unresolved regression reproduced `[4, 3, 5, 6]` instead of source order `[3, 4, 5, 6]`. The producing collection now restores order from retained source offsets before module attribution and public graph consumers; no downstream adapter repair was added. A reused options object remains dynamic after it escapes to the first constructor.
-
-After the fix, all 49 targeted cases across five files passed, including the public CLI/MCP/fact-view workflow and capacity/identity cases. One additional real Joplin run at source revision `3fd71cba2` returned exactly the same complete answer and semantic fingerprint as the original candidate, with complete CLI/MCP view Evidence parity. It took 44.028 s at answer / 43.960 CPU s / 1,524,555,776 peak cgroup bytes, with the same 13,432 projected task tokens. This is a follow-up validation, not an additional paired latency comparison. The JSON stores its runtime and current source pins separately; the original trial receipts and historical source pins remain unchanged.
-
-## Shared query performance review follow-up
-
-The stored-alias example raised in review already returns unknown on the reviewed production code: the exact negative source case passes, and the public CLI returns one dynamic window with zero explicit preferences. The shared `reference-store` producer records the assignment escape before construction. No mutation rule was changed; the negative regression is retained.
-
-The repeated-effects cost was reproducible. Candidate discovery needed only lexical identity but collected full mutation reports; each later capture also materialized every effect before checking for a prior escape. The shared index now offers lexical-only lookup and an early-exit predicate. Windows and request analysis use those operations. The same owner still supplies complete effects to the require-source consumer, which needs filtered effect kinds; no second interpretation or persistent cache was added.
-
-The [preserved scaling control](../../experiments/analysis-efficiency/window-option-scaling.mjs) measures real production source analysis on synthetic capacity inputs; it is not a real-application or agent task. All samples and module hashes are retained. CPU medians across three sequential samples were:
-
-| Shared-options constructors | Before (CPU s) | After (CPU s) |
-| --------------------------- | -------------: | ------------: |
-| 256                         |        0.29703 |       0.17821 |
-| 512                         |        0.96105 |       0.08709 |
-| 1024                        |        4.41298 |       0.20032 |
-
-The first 256 sample is the first algorithm execution in each process; later rounds and larger sizes can use warmed V8 code. These medians mix that progression and do not establish cold-task scaling across applications. A deterministic regression separately bounds escaped-effect reads for 128 captures to at most 4N while requiring unindexed unknowns, a valid first capture and unknown reused contents. Timing is not a test gate. Reproduce the capacity control, after building each pinned checkout, with `node experiments/analysis-efficiency/window-option-scaling.mjs LABEL 256,512,1024` under the same resource observer.
-
-After this refactor, 107 cases across 10 focused files passed, including request CLI/MCP, require-source, worker-schema, identity, capacity and retained-fact workflows. A new real Joplin run at `9207ece2090208c272d2689c4002438ceda41145` preserves the exact whole answer and semantic fingerprint, including CLI/MCP parity and the same 13,432 projected task tokens. It measured 44.607s / 43.883 CPU s / 1,666,560,000 peak cgroup bytes. Thus the capacity improvement is clear for the tested pattern, while no general real-app speedup is claimed. The new stage stores current source/runtime pins and validation separately; all previous receipts remain unchanged.

docs/wasm-artifacts.md

@@ -46,10 +46,7 @@ Equivalent MCP input:
 ```
 
 Each selected regular file is read through the existing stable artifact reader;
-symlinks, changing files and files over 8 MiB fail closed. An oversized input
-returns `resource_constraint` with resource `file-size` and its fixed byte
-allowance in `reported_limits.maximum_input_bytes`; retrying the unchanged file
-does not raise that allowance. WASM bytes are copied
+symlinks, changing files and files over 8 MiB fail closed. WASM bytes are copied
 into a private workspace as read-only `module.wasm`; its digest is rechecked
 before and after each tool. WABT validates with `--enable-all`,
 reports sections through `wasm-objdump -h -x`, and decodes through

docs/windows-ghidra-p0.md

@@ -17,7 +17,7 @@ additional permission flag or degraded mode is required.
 - Node.js 22.x (>=22.19), 24.x (>=24.11), or 26+;
 - an operator-installed Ghidra 12.1.x distribution (verified with 12.1.4);
 - a 64-bit full JDK inside that installation's declared Java range (JDK 21 or newer, with no maximum, for current 12.1 releases);
-- an explicit native, non-managed x86, x86-64, ARMNT (Thumb-2) or ARM64 PE application/DLL, or a
+- an explicit native, non-managed x86 or x86-64 PE application/DLL, or a
   [raw NMOS 6502 image](raw-binary.md#nmos-6502) with a caller-supplied entry; and
 - the 26 read-only Ghidra inventory, memory, and function-analysis operations.
 
@@ -135,55 +135,9 @@ and artifact SHA-256 before loading the package-owned addon. Native failure
 reasons remain distinct from a valid installation and an unsupported target.
 
 PE header classification and SHA-256 come from the same open file. The Windows
-provider admits native x86, x86-64, ARMNT (Thumb-2) and ARM64 PE applications and DLLs and rejects unsupported roles,
+provider admits native x86 and x86-64 PE applications and DLLs and rejects unsupported roles,
 architectures, managed images, and malformed headers. The original selected
-source coordinate is preserved for native admission. The original COFF machine is
-retained separately from the normalized CPU family. ARM admission requires the
-observed ARMNT machine 0x01C4; ARM64 requires 0xAA64. Legacy ARM (0x01C0), Thumb
-(0x01C2), and unavailable machine facts do not select this Windows lane.
-Without a caller-selected processor override, Ghidra's PE loader
-selects the language from the PE machine field: ARM (`IMAGE_FILE_MACHINE_ARMNT`)
-imports as `ARM:LE:32:v8` (Thumb), ARM64 (`IMAGE_FILE_MACHINE_ARM64`) as
-`AARCH64:LE:64:v8A`. Explicit language/compiler selections remain caller choices
-in the analysis profile and are recorded as explicit imports. The source
-fixture verifier compares the complete observed language ID, not just its CPU
-family prefix. ARM/ARM64 admission is a bounded extension of the x86/x64
-lane. `npm run verify:ghidra:windows -- --arm` or `-- --arm64`, optionally
-combined with `--dll`, selects encoded Thumb or ARM64 PE fixtures on a Windows
-x64 host. The packaged verifier accepts the same flags. These fixtures are not
-compiler-produced programs. ARM64EC (machine 0xA641) and ARM64X are not admitted;
-this target support does not establish Windows-on-Arm host support.
-
-Real Windows x64 verification with Ghidra 12.1.4 and JDK 21 completed the ARM64
-application and ARMNT/Thumb DLL fixtures' 26 read-only operations, constant-return
-decompilation, byte searches, CLI/MCP file-offset parity, source identity, and
-owned cleanup. The DLL fixture also verifies the exported caller/callee
-relationship. The x86/x64 compact-reference value-flow battery does not cover
-ARM or ARM64 instructions. ARM64 EXE file-offset verification includes ambiguous
-mappings; the single-section ARM32 DLL cannot exercise that case.
-
-The runs used two logical CPUs, 512 MiB Node/JVM heaps, a 900-second startup
-budget, and an explicit `REA_GHIDRA_DISABLED_ANALYZERS=WindowsResourceReference`
-test configuration. Default-analyzer runs exceeded the selected startup budget;
-resource-reference analysis and default-configuration completion are not
-established by these results. A Microsoft-signed Coreinfo ARM64 application also
-completed focused MCP decompilation, repeated readback, source-mapped memory
-reads, unchanged-input and cleanup checks. On this constrained host the first
-function query, including cold analysis, took about 434 seconds; its identical
-same-session read took about 23 ms and returned about 4.6 KiB of Evidence. These
-are individual observations, not general latency guarantees. Public ARM32
-DLL verification also completed against Microsoft Visual C++ 2013 ARM
-`msvcr120.dll`, including decompilation of its exported `abs`, repeated readback,
-source-mapped bytes, unchanged-input and cleanup checks. Its first function
-query took about 601 seconds; the same-session repeat took about 11 ms and
-returned about 4.8 KiB of Evidence. After preserving original COFF machines in the
-admission/profile, a further real Windows check rejected legacy ARM/Thumb and
-retained ARMNT/ARM64 admission. A rebuilt-candidate MSVCR120 query completed
-in about 407 seconds with a 15 ms repeat (4,830 bytes of Evidence), unchanged
-input and complete cleanup. That retry selected an 1,800-second startup budget
-after an additional 900-second attempt timed out. The resource bounds were
-unchanged; these observations do not establish a speedup. Configured processor
-selection is covered by profile tests, not these real-provider runs.
+source coordinate is preserved for native admission.
 
 Admission opens and checks every path component without following a reparse
 point. It retains handles, verifies local NTFS semantics, and observes volume
@@ -246,8 +200,6 @@ npm run verify:ghidra:windows
 npm run verify:ghidra:windows -- --x86
 npm run verify:ghidra:windows -- --dll
 npm run verify:ghidra:windows -- --x86 --dll
-npm run verify:ghidra:windows -- --arm64
-npm run verify:ghidra:windows -- --arm64 --dll
 npm run verify:ghidra:windows:package -- --x86
 npm run verify:ghidra:windows:package -- --dll
 npm run verify:ghidra:windows:package -- --x86 --dll

experiments/analysis-efficiency/agent-trial.py

@@ -4,7 +4,6 @@ import argparse
 import hashlib
 import json
 import os
-import re
 from pathlib import Path
 import shutil
 import signal
@@ -23,31 +22,7 @@ def file_digest(path):
     return digest.hexdigest()
 
 
-def pinned_experimental_engine(settings):
-    expected = settings.get('REA_ATOMIC_NATIVE_IR_ENGINE_SHA256')
-    if expected is None:
-        return None
-    if not re.fullmatch(r'[0-9a-f]{64}', expected):
-        raise ValueError('Experimental native engine pin must be a SHA-256')
-    path = Path(settings.get('REA_KUNA_COMMAND', ''))
-    if not path.is_absolute() or not path.is_file() or not os.access(path, os.X_OK):
-        raise ValueError('Pinned experimental engine requires an absolute executable file')
-    actual = file_digest(path)
-    if actual != expected:
-        raise ValueError('Experimental engine digest differs from its pin; use a preserved build artifact')
-    return {'path': str(path), 'sha256': actual}
-
-
-def experimental_engine_unchanged(receipt):
-    if receipt is None:
-        return None
-    try:
-        return file_digest(Path(receipt['path'])) == receipt['sha256']
-    except OSError:
-        return False
-
-
-def runtime_fingerprint(root, entrypoint=None):
+def runtime_fingerprint(root):
     files = []
     for name in ['dist', 'bridge']:
         for path in sorted((root / name).rglob('*')):
@@ -55,18 +30,6 @@ def runtime_fingerprint(root, entrypoint=None):
                 raise ValueError('Runtime fingerprint does not follow symlinks')
             if path.is_file():
                 files.append({'path': path.relative_to(root).as_posix(), 'sha256': file_digest(path)})
-    if entrypoint is not None:
-        # Include the experimental modules and their installed QuickJS JS/WASM,
-        # plus the shared fact owner; the entrypoint alone does not pin them.
-        for directory in [entrypoint.parent, root / 'experiments/atomic-re-tools']:
-            for path in sorted(directory.rglob('*')):
-                if path.suffix not in {'.mjs', '.cjs', '.js', '.wasm'} and path.name not in {'package.json', 'package-lock.json'}:
-                    continue
-                if path.is_symlink():
-                    raise ValueError('Experimental runtime fingerprint does not follow symlinks')
-                if path.is_file():
-                    label = path.relative_to(root).as_posix() if path.is_relative_to(root) else path.as_posix()
-                    files.append({'path': label, 'sha256': file_digest(path)})
     files.sort(key=lambda row: row['path'])
     text = json.dumps(files, separators=(',', ':'), ensure_ascii=False)
     return files, hashlib.sha256(text.encode()).hexdigest()
@@ -76,12 +39,6 @@ def main():
     parser = argparse.ArgumentParser()
     parser.add_argument('--mode', choices=['direct', 'client-code'], default='direct')
     parser.add_argument('--runtime-root', type=Path, required=True)
-    parser.add_argument('--mcp-entrypoint', type=Path,
-                        help='Caller-selected experimental stdio MCP entrypoint; leaves production dispatcher unchanged')
-    parser.add_argument('--server-name', default='rea')
-    parser.add_argument('--protocol-profile', choices=['canonical', 'atomic', 'atomic-direct'], default='canonical')
-    parser.add_argument('--profile-parent', type=Path,
-                        help='Absolute parent outside the repository for the isolated model workspace')
     parser.add_argument('--revision', required=True)
     parser.add_argument('--prompt', type=Path, required=True)
     parser.add_argument('--artifact-path', help='Replace {{artifact_path}} in a question template')
@@ -97,10 +54,6 @@ def main():
                         help='Retain owned tool/usage items; excludes account/ambient state')
     parser.add_argument('--guide-enabled-tools', action='store_true',
                         help='Opt-in exact-name discovery guidance for selected REA tools')
-    parser.add_argument('--normalize-mcp-guidance', action='store_true',
-                        help='Opt-in common envelope/stopping guidance, identical across protocol lanes')
-    parser.add_argument('--guide-long-waits', action='store_true',
-                        help='Opt-in common client wait guidance; does not change analysis contracts or deadlines')
     args = parser.parse_args()
     if args.guide_enabled_tools and args.enabled_tools is None:
         parser.error('--guide-enabled-tools requires --enabled-tools')
@@ -141,19 +94,13 @@ def main():
     if undeclared:
         raise ValueError('Declare inherited provider settings explicitly in --providers: '
                          + ', '.join(undeclared) + '. Values are not logged.')
-    # Fail before copying credentials or spending model tokens. Cargo test/build
-    # can replace a mutable target/release path with a different feature build.
-    experimental_engine = pinned_experimental_engine(provider_env)
     source_auth_home = (Path(os.environ['CODEX_HOME']) if 'CODEX_HOME' in os.environ
                         else Path.home() / '.codex')
     source_auth = source_auth_home / 'auth.json'
     args.output.mkdir(parents=True, exist_ok=False, mode=0o700)
-    runtime_files, runtime_digest = runtime_fingerprint(repository, args.mcp_entrypoint)
+    runtime_files, runtime_digest = runtime_fingerprint(repository)
     (args.output / 'runtime-files.json').write_text(json.dumps(runtime_files))
-    if args.profile_parent and (not args.profile_parent.is_absolute()
-            or args.profile_parent.resolve().is_relative_to(repository.resolve())):
-        raise ValueError('profile-parent must be an absolute directory outside runtime-root')
-    profile = Path(tempfile.mkdtemp(prefix='rea-model-profile-', dir=args.profile_parent or args.output))
+    profile = Path(tempfile.mkdtemp(prefix='profile-', dir=args.output))
     trial_codex_home = profile / 'codex'
     account = profile / 'account'
     workspace = profile / 'workspace'
@@ -172,12 +119,7 @@ def main():
         'NODE_OPTIONS': '--max-old-space-size=512',
     })
     target_digest = file_digest(Path(args.artifact_path)) if args.artifact_path else None
-    if not args.server_name.replace('-', '').replace('_', '').isalnum():
-        raise ValueError('server-name must contain only letters, digits, hyphens or underscores')
-    if args.mcp_entrypoint and not args.mcp_entrypoint.is_absolute():
-        raise ValueError('mcp-entrypoint must be absolute')
-    command_args = ([str(args.mcp_entrypoint)] if args.mcp_entrypoint
-                    else [str(repository / 'scripts/rea.mjs'), 'mcp'])
+    command_args = [str(repository / 'scripts/rea.mjs'), 'mcp']
     instruction = (
         'Use the registered REA MCP server for this investigation. Static analysis '
         'only: do not execute target code, fetch URLs, launch a GUI, or modify targets. '
@@ -190,23 +132,6 @@ def main():
         'Prefer summary/focused views where appropriate. Do not invent successful facts '
         'after a tool error. No other agents. Stop once the requested facts are supported.'
     )
-    if args.protocol_profile in {'atomic', 'atomic-direct'}:
-        instruction = (
-            'Use the registered ' + args.server_name + ' MCP server for this static binary investigation. '
-            'Call reference to inspect API contracts, then compose the supported analysis calls. '
-            'Do not execute target code, fetch URLs, launch a GUI, modify targets, use shell/file tools, '
-            'or use other agents. API methods return {ok,context,data} or {ok:false,error}; '
-            'execute_javascript returns the script value, with script-derived authority. '
-            'Preserve real evidence_id values, artifact digest, uncertainty and traversal boundaries. '
-            'Check failures before reading data. Do not infer absence from partial coverage. '
-            'Do not return complete inventories or source reports when a focused answer suffices. '
-            'Close the binary when finished. No precomputed answer is available to you.'
-        )
-        if args.protocol_profile == 'atomic-direct':
-            instruction = instruction.replace(
-                'execute_javascript returns the script value, with script-derived authority. ',
-                'Call the registered facts_* tools directly; no JavaScript execution tool is registered. '
-            )
     if args.authority == 'browser':
         instruction = (
             'Use the registered REA tools for the explicitly selected public browser scenario. '
@@ -222,31 +147,14 @@ def main():
             'possible and select the requested normalized_result fields before returning '
             'intermediate output to model context. Keep real Evidence IDs and limitations.'
         )
-    if args.normalize_mcp_guidance:
-        instruction += (
-            ' MCP calls return transport envelopes: prefer structuredContent when present; '
-            'otherwise parse the text content JSON. Do not print both duplicate encodings. '
-            'Apply the same rule to every tool. Stop once the requested facts are supported, '
-            'state missing coverage explicitly, and close the binary when finished.'
-        )
     if args.guide_enabled_tools:
         instruction += (
-            ' Configured REA server label: ' + json.dumps(args.server_name)
-            + '. Enabled tool base names for this trial: ' + json.dumps(enabled_tools)
-            + '. Discover their actual registered callable names from ALL_TOOLS metadata; '
-            'do not construct a namespace from the server label. Select only matching '
-            'enabled base names and return only their metadata. Preserve the original analyst question, '
+            ' Configured REA tool function names for this trial: '
+            + json.dumps(['mcp__rea__' + name for name in enabled_tools])
+            + '. For discovery select only these exact names from ALL_TOOLS and '
+            'return only their metadata. Preserve the original analyst question, '
             'dependency order and source Evidence.'
         )
-    if args.guide_long_waits:
-        instruction += (
-            ' When the client executor reports a running cell during a long analysis, '
-            'resume that same cell with wait and yield_time_ms:30000, within the '
-            'advertised tool schema, rather than repeated one-second polls. '
-            'The wait may return early when the result is ready. Do not sleep or '
-            'start duplicate analysis calls just to check completion. Keep the '
-            'original analysis dependencies, evidence and stopping requirements.'
-        )
     quote = json.dumps
     config = '\n'.join([
         'approval_policy = "never"', 'sandbox_mode = "read-only"',
@@ -258,16 +166,16 @@ def main():
         'code_mode = ' + ('true' if args.mode == 'client-code' else 'false'),
         'code_mode_only = ' + ('true' if args.mode == 'client-code' else 'false'),
         '[history]', 'persistence = "none"',
-        '[mcp_servers.' + args.server_name + ']', 'command = ' + quote(node),
+        '[mcp_servers.rea]', 'command = ' + quote(node),
         'args = ' + quote(command_args), 'startup_timeout_sec = 60',
         'tool_timeout_sec = 600',
         *([] if enabled_tools is None else ['enabled_tools = ' + quote(enabled_tools)]),
-        '[mcp_servers.' + args.server_name + '.env]',
+        '[mcp_servers.rea.env]',
         *[key + ' = ' + quote(value) for key, value in provider_env.items()],
     ]) + '\n'
     # MCP read-only hints cover normal static tools. Explicitly authorize only
     # the session-opening primitive needed by the requested native tasks.
-    config += '[mcp_servers.' + args.server_name + '.tools.open_binary]\napproval_mode = "approve"\n'
+    config += '[mcp_servers.rea.tools.open_binary]\napproval_mode = "approve"\n'
     for tool in ['analyze_javascript_application', 'inspect_analysis_view',
                  'inspect_android_package', 'search_android_classes',
                  'inspect_android_class', 'inspect_android_method',
@@ -281,7 +189,7 @@ def main():
                  'inspect_evm_interface', 'get_evidence_bundle', 'export_evidence_bundle',
                  'capture_browser_scenario',
                  'resolve_containing_procedure', 'analyze_function', 'close_binary']:
-        config += '[mcp_servers.' + args.server_name + '.tools.' + tool + ']\napproval_mode = "approve"\n'
+        config += '[mcp_servers.rea.tools.' + tool + ']\napproval_mode = "approve"\n'
     try:
         if source_auth.exists():
             shutil.copyfile(source_auth, auth)
@@ -301,17 +209,10 @@ def main():
             'mode': args.mode, 'model': args.model, 'reasoning': args.reasoning,
             'capture_tool_context': args.capture_tool_context,
             'guide_enabled_tools': args.guide_enabled_tools,
-            'normalize_mcp_guidance': args.normalize_mcp_guidance,
-            'guide_long_waits': args.guide_long_waits,
             'driver_commit': subprocess.check_output(
                 ['git', 'rev-parse', 'HEAD'], cwd=driver_repository, text=True).strip(),
             'runtime_revision': args.revision,
             'runtime_root': str(repository),
-            'mcp_server_name': args.server_name,
-            'protocol_profile': args.protocol_profile,
-            'isolated_profile_parent': str(args.profile_parent) if args.profile_parent else str(args.output),
-            'mcp_entrypoint': str(args.mcp_entrypoint) if args.mcp_entrypoint else None,
-            'mcp_entrypoint_sha256': file_digest(args.mcp_entrypoint) if args.mcp_entrypoint else None,
             'selected_artifact_path': args.artifact_path,
             'selected_artifact_sha256_before': target_digest,
             'enabled_tools': enabled_tools,
@@ -329,7 +230,6 @@ def main():
             'question_template_sha256': template_digest,
             'provider_settings_sha256': hashlib.sha256(
                 json.dumps(provider_env, sort_keys=True).encode()).hexdigest(),
-            'experimental_engine': experimental_engine,
             'provider_search_path_sha256': hashlib.sha256(
                 provider_env.get('PATH', os.environ.get('PATH', '')).encode()).hexdigest(),
             'provider_environment_policy_sha256': hashlib.sha256(
@@ -382,9 +282,6 @@ def main():
         summary = {
             'mode': args.mode, 'requested_model': args.model, 'reasoning': args.reasoning,
             'runtime_revision': args.revision,
-            'runtime_inputs_unchanged': runtime_fingerprint(repository, args.mcp_entrypoint)[1] == runtime_digest,
-            'experimental_engine': experimental_engine,
-            'experimental_engine_unchanged': experimental_engine_unchanged(experimental_engine),
             'capture_tool_context_requested': args.capture_tool_context,
             'selected_artifact_sha256_before': target_digest,
             'selected_artifact_sha256_after': final_target_digest,
@@ -399,10 +296,6 @@ def main():
         }
         (args.output / 'summary.json').write_text(json.dumps(summary, indent=2) + '\n')
         print(json.dumps(summary))
-        if not summary['runtime_inputs_unchanged']:
-            raise RuntimeError('Runtime inputs changed during the trial; retain costs but reject the comparison')
-        if summary['experimental_engine_unchanged'] is False:
-            raise RuntimeError('Experimental engine changed during the trial; retain costs but reject the comparison')
     finally:
         try:
             if args.capture_tool_context: